Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8922
Gene name
LocationContig_613:11..362
Strand+
Gene length (bp)351
Transcript length (bp)300
Coding sequence length (bp)300
Protein length (aa) 100

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.7031 0.471 0.0689 0.2358 0.122 0.0497 0.3303 0.4247 0.1753 0.1269

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6554
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|2216
Ophiocordyceps subramaniannii Hirsu2|301
Ophiocordyceps subramaniannii Hirsu2|4323
Ophiocordyceps subramaniannii Hirsu2|8922 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8922
MTANDEIKWMVTSFASRLDTLELAVSMGNSQTGQAQDGVSEILRRLSTAEDMIKTIESLKKSLKELIHSLVLHLL
GGEGVDDVEIQPPYVCEELHSQAP*
Coding >Hirsu2|8922
ATGACGGCAAATGATGAGATAAAATGGATGGTTACCAGTTTCGCGTCTCGTCTAGATACTCTAGAACTTGCGGTA
TCGATGGGCAATTCACAGACGGGTCAAGCGCAAGATGGAGTTTCTGAGATACTCAGGCGCTTGTCAACCGCTGAA
GATATGATCAAGACGATAGAGAGCCTGAAGAAGAGCCTTAAAGAGCTTATTCATTCTTTGGTGCTTCATCTTCTA
GGCGGCGAGGGCGTCGACGATGTCGAGATACAACCACCTTATGTGTGTGAAGAGCTACACTCACAGGCGCCTTGA
Transcript >Hirsu2|8922
ATGACGGCAAATGATGAGATAAAATGGATGGTTACCAGTTTCGCGTCTCGTCTAGATACTCTAGAACTTGCGGTA
TCGATGGGCAATTCACAGACGGGTCAAGCGCAAGATGGAGTTTCTGAGATACTCAGGCGCTTGTCAACCGCTGAA
GATATGATCAAGACGATAGAGAGCCTGAAGAAGAGCCTTAAAGAGCTTATTCATTCTTTGGTGCTTCATCTTCTA
GGCGGCGAGGGCGTCGACGATGTCGAGATACAACCACCTTATGTGTGTGAAGAGCTACACTCACAGGCGCCTTGA
Gene >Hirsu2|8922
ATGACGGCAAATGATGAGATAAAATGGTAAGTCTTCAAGACTCCGGATTACCATGAAGTAGCTAATACATATACC
AGGATGGTTACCAGTTTCGCGTCTCGTCTAGATACTCTAGAACTTGCGGTATCGATGGGCAATTCACAGACGGGT
CAAGCGCAAGATGGAGTTTCTGAGATACTCAGGCGCTTGTCAACCGCTGAAGATATGATCAAGACGATAGAGAGC
CTGAAGAAGAGCCTTAAAGAGCTTATTCATTCTTTGGTGCTTCATCTTCTAGGCGGCGAGGGCGTCGACGATGTC
GAGATACAACCACCTTATGTGTGTGAAGAGCTACACTCACAGGCGCCTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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