Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8914
Gene name
LocationContig_611:12359..13154
Strand+
Gene length (bp)795
Transcript length (bp)546
Coding sequence length (bp)546
Protein length (aa) 182

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08914 Myb_DNA-bind_2 Rap1 Myb domain 6.5E-08 107 146
PF16589 BRCT_2 BRCT domain, a BRCA1 C-terminus domain 1.1E-06 16 91

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 28 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8914
MAAPVTYNGVASASGGNIFGGTRFWVAQRVPMRPSILSNITSNGGIIEPLEKNAEILIADHARKDAPAGSCSWKF
ITESIDNGCMQLQDRYLKGPTAPTTAGRSKFGRTAFTHADDVALAKWVLSHERRVSGNAIYQQFETINPRHPVDQ
QFCEQQRNGSVGTSAKNAFSELCLFDPEKGP*
Coding >Hirsu2|8914
ATGGCCGCCCCCGTTACGTATAACGGCGTCGCCAGCGCCTCTGGCGGCAATATCTTCGGAGGCACTCGATTTTGG
GTCGCCCAGAGGGTTCCTATGAGACCCTCCATTCTGTCAAATATAACGAGCAACGGCGGTATCATCGAGCCACTG
GAGAAGAATGCCGAGATTCTTATTGCGGATCATGCCAGGAAGGACGCGCCGGCGGGCTCATGCTCGTGGAAATTC
ATCACAGAATCGATAGACAACGGCTGCATGCAGCTCCAAGACCGTTACCTCAAAGGCCCAACGGCGCCAACAACG
GCAGGCCGTTCGAAATTCGGCCGAACGGCCTTCACCCATGCAGACGACGTTGCTCTGGCTAAGTGGGTGCTCTCC
CACGAACGTCGCGTGTCGGGGAACGCGATCTACCAGCAGTTTGAAACTATCAACCCTCGACACCCGGTCGACCAG
CAATTCTGCGAGCAGCAACGAAACGGATCGGTCGGAACGAGTGCCAAAAACGCCTTTAGCGAACTCTGTCTCTTC
GACCCCGAGAAAGGCCCTTGA
Transcript >Hirsu2|8914
ATGGCCGCCCCCGTTACGTATAACGGCGTCGCCAGCGCCTCTGGCGGCAATATCTTCGGAGGCACTCGATTTTGG
GTCGCCCAGAGGGTTCCTATGAGACCCTCCATTCTGTCAAATATAACGAGCAACGGCGGTATCATCGAGCCACTG
GAGAAGAATGCCGAGATTCTTATTGCGGATCATGCCAGGAAGGACGCGCCGGCGGGCTCATGCTCGTGGAAATTC
ATCACAGAATCGATAGACAACGGCTGCATGCAGCTCCAAGACCGTTACCTCAAAGGCCCAACGGCGCCAACAACG
GCAGGCCGTTCGAAATTCGGCCGAACGGCCTTCACCCATGCAGACGACGTTGCTCTGGCTAAGTGGGTGCTCTCC
CACGAACGTCGCGTGTCGGGGAACGCGATCTACCAGCAGTTTGAAACTATCAACCCTCGACACCCGGTCGACCAG
CAATTCTGCGAGCAGCAACGAAACGGATCGGTCGGAACGAGTGCCAAAAACGCCTTTAGCGAACTCTGTCTCTTC
GACCCCGAGAAAGGCCCTTGA
Gene >Hirsu2|8914
ATGGCCGCCCCCGTTACGTATAACGGCGTCGCCAGCGCCTCTGGCGGCAATATCTTCGGAGGCACTCGATTTTGG
GTCGCCCAGAGGGTTCCTATGAGACCCTCCATTCTGTCAAATATAACGGCAAGTCTCATCCCGCGGCACCCTGGG
CGGAATGCTGGGCTGACTGTCGCGCAAGAGCAACGGCGGTATCATCGAGCCACTGGAGAAGAATGCCGAGATTCT
TATTGCGGATCATGCCAGGAAGGACGCGCCGGCGGGCTCATGCTCGTGGAAATTCATCACAGAATCGATAGACAA
CGGCTGCATGCAGCTCCAAGACCGTTACCTCAAAGGCCCAACGGCGCCAACAACGGCAGGCCGTTCGAAATTCGG
CCGAACGGCCTTCACCCATGCAGACGACGTTGCTCTGGCTAAGTGGGTGCTCTCCCACGAACGTCGCGTGTCGGG
GAACGCGATCTACCAGCAGTTTGAAACTATCGTACGTGACCCTGCGTCGCATCGTGATACTGTCCTGGATGGGCA
CACTGATGTCACCCAGAACCCTCGACACCCGTGGAATTCATGGCGGGCTAGATTTACGAAGAATCTGTCTAAACG
AGGCTCGGAAGAGTTACAAAAACTTGCGAGCCAAAAACTACCTGCAGACTACTTCTCCGCAGTCGAACAAGCTGC
CTTTCCCGACCAAGGGTCGACCAGCAATTCTGCGAGCAGCAACGAAACGGATCGGTCGGAACGAGTGCCAAAAAC
GCCTTTAGCGAACTCTGTCTCTTCGACCCCGAGAAAGGCCCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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