Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|8881
Gene name
Location	Contig_608:780..2341
Strand	+
Gene length (bp)	1561
Transcript length (bp)	1485
Coding sequence length (bp)	1485
Protein length (aa)	495

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01490	Aa_trans	Transmembrane amino acid transporter protein	1.1E-54	78	472

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P38680\|MTR_NEUCR	N amino acid transport system protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=mtr PE=3 SV=2	24	494	0.0E+00

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 69	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	103	125	22
2	158	180	22
3	190	212	22
4	217	239	22
5	259	281	22
6	301	323	22
7	343	365	22
8	386	408	22
9	418	437	19
10	450	472	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|8881 MESPVSSDGKTKMVGGSPDLAKTSSQPAHQRLHQQSTTPSEENVLSGSAIAGEVSEFEERRADVEKQKAAEGDAH FHRLGWKRLTVILIVEAVALGSLSLPAAFATLGMVAGVFCTVGLGLIAIFTSDIVGQVKLKYPEVAHYADAGRLL MGRFGYELVGAMFVLQLTFLVGSHTLTGTIAFLNMTDNGACSVIFGFVSAVILLALAVPPSFAEVAILGYIDFVS IIAAIGLTIIATGIQASQREGGMASVDWSAWPKPGITFADAFIAIANIVFAYSFCMCQFTFMDEMHTPSDYIKSI WSLGIIEIAIYTITGALVYAFVGVDVRSPALLSAGTLISKIAFGIALPVIFISGSINTTVIGRYLHGRMFRNSVT RFINTPKGWATWLALITVITIIAFVIAEVIPFFSDLLSISSSLFVSGFTFYLPAMMWFQLLCKGKWYARENIVKS LMSAFCFVIGIVVLVCGTYASIDDIAHQFNNGSVRGVFTCKPIA*
Coding	>Hirsu2\|8881 ATGGAGTCACCCGTGTCTTCAGATGGCAAGACCAAGATGGTCGGCGGCTCGCCGGACCTGGCCAAGACGTCGTCG CAGCCCGCCCACCAGCGGCTTCACCAGCAGTCGACGACGCCGTCGGAGGAGAACGTGCTGAGCGGCAGCGCCATC GCCGGCGAGGTCAGCGAGTTCGAGGAGCGCCGGGCCGACGTCGAGAAGCAGAAGGCGGCCGAGGGCGACGCCCAC TTCCACCGGCTGGGTTGGAAGCGCCTGACCGTTATCCTCATCGTCGAGGCCGTCGCCCTCGGCAGCCTGAGTCTG CCGGCCGCCTTCGCCACCCTAGGCATGGTCGCCGGCGTCTTCTGCACCGTCGGCCTCGGCCTCATCGCCATCTTC ACCAGCGATATCGTCGGCCAGGTTAAGCTAAAGTATCCCGAGGTCGCCCACTATGCCGACGCCGGCCGCCTGCTC ATGGGCCGCTTCGGGTACGAGCTCGTCGGCGCTATGTTCGTTTTGCAGCTCACCTTCCTCGTCGGCTCGCATACC CTAACAGGAACGATTGCCTTCCTTAATATGACCGACAACGGCGCCTGCTCCGTCATCTTCGGCTTCGTCTCCGCC GTCATCCTCCTCGCTCTAGCCGTGCCCCCGTCCTTCGCCGAGGTCGCTATCCTTGGCTATATCGACTTCGTTTCT ATTATCGCCGCCATCGGTCTCACGATTATCGCCACCGGCATCCAGGCGTCCCAGAGGGAGGGCGGCATGGCTTCG GTAGACTGGTCCGCCTGGCCCAAGCCCGGCATCACCTTCGCCGACGCCTTCATCGCCATCGCCAACATTGTGTTC GCCTATAGCTTCTGCATGTGCCAGTTCACCTTTATGGACGAGATGCACACCCCCTCGGACTATATTAAGTCTATC TGGTCGCTCGGCATCATCGAAATCGCTATCTATACTATCACCGGCGCCCTAGTATATGCCTTTGTTGGCGTCGAT GTCCGGTCGCCTGCCCTGTTGTCTGCGGGCACCCTCATCTCCAAAATCGCCTTCGGCATCGCCCTGCCCGTCATC TTCATCTCCGGCTCCATCAACACCACCGTCATAGGCCGCTACCTGCACGGTCGCATGTTCCGCAACTCCGTCACC CGCTTCATCAACACGCCAAAGGGCTGGGCAACGTGGCTTGCTCTCATCACCGTCATCACCATCATCGCCTTCGTT ATCGCCGAAGTCATCCCCTTCTTCTCCGACCTCCTCTCCATCTCCTCTTCCCTCTTCGTCTCTGGCTTCACTTTC TATCTCCCGGCTATGATGTGGTTCCAGCTGTTATGCAAGGGCAAATGGTACGCGAGAGAAAACATCGTCAAGAGC TTGATGAGCGCCTTCTGCTTCGTCATTGGAATTGTTGTGCTGGTATGCGGTACATATGCCAGCATTGATGATATT GCCCACCAATTCAACAATGGGTCCGTTCGCGGCGTCTTCACCTGCAAACCCATCGCATAA
Transcript	>Hirsu2\|8881 ATGGAGTCACCCGTGTCTTCAGATGGCAAGACCAAGATGGTCGGCGGCTCGCCGGACCTGGCCAAGACGTCGTCG CAGCCCGCCCACCAGCGGCTTCACCAGCAGTCGACGACGCCGTCGGAGGAGAACGTGCTGAGCGGCAGCGCCATC GCCGGCGAGGTCAGCGAGTTCGAGGAGCGCCGGGCCGACGTCGAGAAGCAGAAGGCGGCCGAGGGCGACGCCCAC TTCCACCGGCTGGGTTGGAAGCGCCTGACCGTTATCCTCATCGTCGAGGCCGTCGCCCTCGGCAGCCTGAGTCTG CCGGCCGCCTTCGCCACCCTAGGCATGGTCGCCGGCGTCTTCTGCACCGTCGGCCTCGGCCTCATCGCCATCTTC ACCAGCGATATCGTCGGCCAGGTTAAGCTAAAGTATCCCGAGGTCGCCCACTATGCCGACGCCGGCCGCCTGCTC ATGGGCCGCTTCGGGTACGAGCTCGTCGGCGCTATGTTCGTTTTGCAGCTCACCTTCCTCGTCGGCTCGCATACC CTAACAGGAACGATTGCCTTCCTTAATATGACCGACAACGGCGCCTGCTCCGTCATCTTCGGCTTCGTCTCCGCC GTCATCCTCCTCGCTCTAGCCGTGCCCCCGTCCTTCGCCGAGGTCGCTATCCTTGGCTATATCGACTTCGTTTCT ATTATCGCCGCCATCGGTCTCACGATTATCGCCACCGGCATCCAGGCGTCCCAGAGGGAGGGCGGCATGGCTTCG GTAGACTGGTCCGCCTGGCCCAAGCCCGGCATCACCTTCGCCGACGCCTTCATCGCCATCGCCAACATTGTGTTC GCCTATAGCTTCTGCATGTGCCAGTTCACCTTTATGGACGAGATGCACACCCCCTCGGACTATATTAAGTCTATC TGGTCGCTCGGCATCATCGAAATCGCTATCTATACTATCACCGGCGCCCTAGTATATGCCTTTGTTGGCGTCGAT GTCCGGTCGCCTGCCCTGTTGTCTGCGGGCACCCTCATCTCCAAAATCGCCTTCGGCATCGCCCTGCCCGTCATC TTCATCTCCGGCTCCATCAACACCACCGTCATAGGCCGCTACCTGCACGGTCGCATGTTCCGCAACTCCGTCACC CGCTTCATCAACACGCCAAAGGGCTGGGCAACGTGGCTTGCTCTCATCACCGTCATCACCATCATCGCCTTCGTT ATCGCCGAAGTCATCCCCTTCTTCTCCGACCTCCTCTCCATCTCCTCTTCCCTCTTCGTCTCTGGCTTCACTTTC TATCTCCCGGCTATGATGTGGTTCCAGCTGTTATGCAAGGGCAAATGGTACGCGAGAGAAAACATCGTCAAGAGC TTGATGAGCGCCTTCTGCTTCGTCATTGGAATTGTTGTGCTGGTATGCGGTACATATGCCAGCATTGATGATATT GCCCACCAATTCAACAATGGGTCCGTTCGCGGCGTCTTCACCTGCAAACCCATCGCATAA
Gene	>Hirsu2\|8881 ATGGAGTCACCCGTGTCTTCAGATGGCAAGACCAAGATGGTCGGCGGCTCGCCGGACCTGGCCAAGACGTCGTCG CAGCCCGCCCACCAGCGGCTTCACCAGCAGTCGACGACGCCGTCGGAGGAGAACGTGCTGAGCGGCAGCGCCATC GCCGGCGAGGTCAGCGAGTTCGAGGAGCGCCGGGCCGACGTCGAGAAGCAGAAGGCGGCCGAGGGCGACGCCCAC TTCCACCGGCTGGGTTGGAAGCGCCTGACCGTTATCCTCATCGTCGAGGCCGTCGCCCTCGGCAGCCTGAGTCTG CCGGCCGCCTTCGCCACCCTAGGCATGGTCGCCGGCGTCTTCTGCACCGTCGGCCTCGGCCTCATCGCCATCTTC ACCAGCGATATCGTCGGCCAGGTTAAGCTAAAGTATCCCGAGGTCGCCCACTATGCCGACGCCGGCCGCCTGCTC ATGGGCCGCTTCGGGTACGAGCTCGTCGGCGCTATGTTCGTTTTGCAGCTCACCTTCCTCGTCGGCTCGCATACC CTAACAGGAACGATTGCCTTCCTTAATATGACCGACAACGGCGCCTGCTCCGTCATCTTCGGCTTCGTCTCCGCC GTCATCCTCCTCGCTCTAGCCGTGCCCCCGTCCTTCGCCGAGGTCGCTATCCTTGGCTATATCGACTTCGTTTCT ATTATCGCCGCCATCGGTCTCACGATTATCGCCACCGGCATCCAGGCGTCCCAGAGGGAGGGCGGCATGGCTTCG GTAGACTGGTCCGCCTGGCCCAAGCCCGGCATCACCTTCGCCGACGCCTTCATCGCCATCGCCAACATTGTGTTC GCCTATAGCTTCTGCATGTGCCAGTTCACCTTTATGGACGAGATGCACACCCCCTCGGACTATATTAAGTCTATC TGGTCGCTCGGCATCATCGAAATCGCTATCTATACTATCACCGGCGCCCTAGTATATGCCTTTGTTGGCGTCGAT GTCCGGTCGCCTGCCCTGTTGTCTGCGGGCACCCTCATCTCCAAAATCGCCTTCGGCATCGCCCTGCCCGTCATC TTCATCTCCGGCTCCATCAACACCACCGTCATAGGCCGCTACCTGCACGGTCGCATGTTCCGCAACTCCGTCACC CGCTTCATCAACACGCCAAAGGGCTGGGCAACGTGGCTTGCTCTCATCACCGTCATCACCATCATCGCCTTCGTT ATCGCCGAAGTCATCCCCTTCTTCTCCGACCTCCTCTCCATCTCCTCTTCCCTCTTCGTCTCTGGCTTCACTTTC TATCTCCCGGCTATGATGTGGTTCCAGCTGTTATGCAAGGGCAAATGGTACGCGAGAGAAAACATCGTCAAGAGC TTGATGAGCGCCTTCTGCTTCGTCATTGGAATTGTTGTGCTGGTATGCGGTACATATGCCAGCATTGATGATATT GTACGCCCCCCCCCCTCCCGCTGACGCCGTGTCCTGCCGCTCTCGCAACTCCCATGCTAACGTGATGATTTTCCA GGCCCACCAATTCAACAATGGGTCCGTTCGCGGCGTCTTCACCTGCAAACCCATCGCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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