© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|887 |
| Gene name | |
| Location | Contig_1186:1509..4087 |
| Strand | - |
| Gene length (bp) | 2578 |
| Transcript length (bp) | 2514 |
| Coding sequence length (bp) | 2514 |
| Protein length (aa) | 838 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P11551|FUCP_ECOLI | L-fucose-proton symporter OS=Escherichia coli (strain K12) GN=fucP PE=1 SV=3 | 364 | 809 | 5.0E-17 |
| sp|P44776|FUCP_HAEIN | L-fucose permease OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=fucP PE=3 SV=1 | 383 | 558 | 6.0E-12 |
| sp|P0C105|GLUP_BRUAB | Glucose/galactose transporter OS=Brucella abortus biovar 1 (strain 9-941) GN=gluP PE=3 SV=1 | 387 | 785 | 1.0E-10 |
| sp|Q2YIJ8|GLUP_BRUA2 | Glucose/galactose transporter OS=Brucella abortus (strain 2308) GN=gluP PE=3 SV=1 | 387 | 785 | 1.0E-10 |
| sp|Q8YB48|GLUP_BRUME | Glucose/galactose transporter OS=Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094) GN=gluP PE=3 SV=1 | 387 | 785 | 4.0E-09 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 18 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 35 | 22 |
| 2 | 50 | 72 | 22 |
| 3 | 92 | 114 | 22 |
| 4 | 129 | 151 | 22 |
| 5 | 172 | 194 | 22 |
| 6 | 209 | 231 | 22 |
| 7 | 386 | 408 | 22 |
| 8 | 418 | 440 | 22 |
| 9 | 453 | 475 | 22 |
| 10 | 490 | 512 | 22 |
| 11 | 560 | 582 | 22 |
| 12 | 669 | 691 | 22 |
| 13 | 703 | 720 | 17 |
| 14 | 730 | 749 | 19 |
| 15 | 761 | 783 | 22 |
| 16 | 788 | 810 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|887 MAATGDEEQRGRLIFAVTISTLGLATMLVGARTVSRFFIVRRVTWDDKVMILAWFLASGLSFTVSLGAFHGLGKS EADISDESKRILLRCEYVFSILYNPALMATKTAILIFYLHLANNTQLFLRYASWTVLAISNLAGFILTVINIFQC TPIQAAWTLYTFDETASCIPLLTEFICVTPINIITDLAILVLPIPLLTNLRLPIRQKTVLVLAFALGVFVTVIGV IRIYYLQCAILDDSPEEDGAPMQNITTLGGQADFSRSASFALMWSTVEVNIGIACACIPTIKPLIAKLFPRLLND SPGNRSQASIDSQLTLCPSQSTSSNLTPSAKKAATMKEKQLEDEFETPPASPCDNTLFGFVNMTKPINMIDASVA ESFRFCAMISSLFFLWGVSYGLIDAINHAVALVSNITTAQSIGLSAAYFGGGYFFGPLFATRFLLRRGRDGVLSC DDVGGYKLTFITGICIYGVGTISFWPSAALSSYPGFLLSNLIAGFGLAVLEVGANAYIILCGPPDYGQSRLLVAQ GIQGLGSVVSSLLGQKVLLTGIVAGDSKALINIQWVYLGATLMCALIGLLFYYAPLPEATDDELDQLAGRLQVDP CKHVIGGLQLRTASLVLAVFTQYMYVATQETNHLFMRPLLLSSFGVDISRGESNTDQPPGMTLTIPDYLLLGRTA FTISRLLFGYLTYLSASRPRLPRPHTYLAMCVVASLVLSVVRVVVNPSNPNLRVIPIVLMFFVEAPMWPLLFALG LRGQGRRTSTAAALLTMGGSGSALIPYAMYAIVQAGATVQAAYVVVVAVQATLTLYPAFLTLNRDARRLAEPYSA ARHPRRTSRDGT* |
| Coding | >Hirsu2|887 ATGGCCGCCACCGGTGACGAGGAGCAGCGTGGGCGGCTCATCTTTGCCGTCACCATTTCCACGCTTGGCCTCGCC ACCATGCTCGTCGGCGCCCGCACCGTGAGCCGCTTCTTCATCGTCCGTAGGGTCACCTGGGACGACAAGGTCATG ATCTTGGCCTGGTTTCTCGCCTCCGGCCTCTCATTCACCGTCAGCCTCGGCGCCTTCCACGGCCTGGGAAAATCC GAGGCCGATATTTCGGATGAGAGCAAGCGCATCCTTCTCCGGTGCGAATACGTCTTCTCCATCTTATACAACCCG GCCCTCATGGCCACCAAGACGGCCATCTTGATATTCTATCTCCACCTTGCAAACAACACCCAGCTGTTCCTGCGC TATGCCTCATGGACCGTCCTGGCCATCAGCAACCTCGCCGGCTTCATCCTCACCGTCATCAACATCTTCCAGTGC ACCCCGATCCAGGCGGCCTGGACTCTGTACACCTTCGACGAGACCGCCTCATGCATACCGCTCCTCACCGAGTTT ATCTGCGTTACGCCTATTAATATTATCACAGACCTGGCCATTCTCGTCTTACCCATCCCGCTCCTCACCAATCTA CGGCTGCCGATCCGGCAGAAGACGGTTCTCGTACTAGCCTTTGCCCTCGGCGTCTTCGTCACCGTCATCGGCGTC ATCCGCATCTACTACCTGCAGTGCGCTATCCTGGACGACTCGCCGGAGGAAGACGGAGCGCCGATGCAGAATATT ACGACGCTCGGCGGTCAGGCCGATTTCTCGAGGAGCGCCTCCTTCGCCTTGATGTGGAGCACAGTCGAGGTCAAC ATCGGCATCGCCTGTGCCTGCATCCCGACTATCAAGCCGCTCATCGCCAAGCTGTTCCCCAGGTTACTGAACGAC AGTCCCGGCAACCGGTCGCAGGCTTCCATCGACTCTCAGCTGACGCTGTGCCCGAGCCAGTCGACGTCGTCGAAC CTGACGCCGTCGGCCAAGAAGGCGGCCACGATGAAGGAGAAGCAGCTGGAGGACGAGTTTGAGACGCCGCCGGCG AGTCCCTGCGACAACACCCTCTTCGGCTTCGTCAACATGACCAAGCCGATCAACATGATCGATGCTAGCGTGGCA GAGTCCTTCCGCTTCTGTGCCATGATCTCCTCCCTCTTCTTCCTCTGGGGCGTGTCGTACGGCCTGATCGATGCC ATCAACCACGCCGTGGCCCTGGTCAGCAACATCACGACGGCCCAGTCCATCGGCCTGTCGGCCGCCTACTTTGGC GGCGGCTACTTCTTCGGGCCCCTCTTCGCCACCCGGTTCCTCCTGCGGCGCGGGCGCGACGGCGTCCTGTCGTGC GACGACGTGGGCGGCTACAAGCTGACCTTCATCACCGGCATCTGCATCTACGGCGTCGGCACCATCTCCTTCTGG CCGTCGGCGGCCCTGTCGTCCTACCCCGGCTTCTTGCTCAGCAACCTCATCGCCGGCTTCGGCTTGGCCGTCCTC GAGGTCGGCGCCAACGCCTACATCATCCTGTGTGGGCCGCCCGACTACGGCCAGTCGCGGCTCCTGGTGGCCCAG GGGATCCAGGGGCTGGGCAGCGTCGTCAGCAGCCTGCTGGGGCAAAAGGTGCTGCTCACGGGCATCGTCGCCGGC GACAGCAAGGCGCTCATCAACATCCAATGGGTCTACCTGGGCGCGACGCTCATGTGCGCCCTCATCGGCCTCTTG TTCTACTACGCGCCCTTGCCCGAGGCCACCGACGATGAGCTCGACCAGCTGGCGGGCCGCCTCCAGGTCGACCCG TGCAAGCACGTCATCGGCGGCCTGCAGCTGCGCACGGCGAGCCTCGTCCTGGCCGTCTTCACGCAGTACATGTAC GTGGCGACGCAGGAGACCAACCACCTCTTCATGCGGCCCCTCCTCCTCTCCAGCTTCGGCGTCGACATCAGCCGG GGGGAAAGCAATACGGACCAGCCGCCGGGCATGACGCTGACGATCCCCGACTACCTGCTGCTCGGACGCACGGCC TTTACCATCTCCCGCCTCCTCTTCGGCTACCTGACCTATCTGTCGGCCTCGCGTCCCCGACTGCCCAGGCCGCAC ACGTATCTCGCCATGTGCGTGGTCGCGAGCCTGGTCCTGTCCGTCGTCCGCGTCGTGGTCAACCCGTCGAACCCC AACCTGCGCGTCATCCCTATCGTGCTGATGTTCTTCGTCGAGGCCCCCATGTGGCCGCTGCTGTTCGCGCTCGGC CTGCGCGGGCAGGGGCGGAGGACGTCCACGGCGGCGGCGCTGCTCACGATGGGCGGCTCCGGGTCGGCGCTGATC CCGTACGCCATGTACGCCATCGTCCAGGCCGGCGCCACGGTGCAGGCCGCCTACGTGGTCGTCGTTGCCGTGCAG GCCACGCTCACATTGTACCCCGCCTTTCTCACGCTCAACCGGGACGCGAGACGACTGGCCGAGCCGTATTCCGCT GCGCGGCATCCGAGGCGAACGAGCCGAGACGGCACCTGA |
| Transcript | >Hirsu2|887 ATGGCCGCCACCGGTGACGAGGAGCAGCGTGGGCGGCTCATCTTTGCCGTCACCATTTCCACGCTTGGCCTCGCC ACCATGCTCGTCGGCGCCCGCACCGTGAGCCGCTTCTTCATCGTCCGTAGGGTCACCTGGGACGACAAGGTCATG ATCTTGGCCTGGTTTCTCGCCTCCGGCCTCTCATTCACCGTCAGCCTCGGCGCCTTCCACGGCCTGGGAAAATCC GAGGCCGATATTTCGGATGAGAGCAAGCGCATCCTTCTCCGGTGCGAATACGTCTTCTCCATCTTATACAACCCG GCCCTCATGGCCACCAAGACGGCCATCTTGATATTCTATCTCCACCTTGCAAACAACACCCAGCTGTTCCTGCGC TATGCCTCATGGACCGTCCTGGCCATCAGCAACCTCGCCGGCTTCATCCTCACCGTCATCAACATCTTCCAGTGC ACCCCGATCCAGGCGGCCTGGACTCTGTACACCTTCGACGAGACCGCCTCATGCATACCGCTCCTCACCGAGTTT ATCTGCGTTACGCCTATTAATATTATCACAGACCTGGCCATTCTCGTCTTACCCATCCCGCTCCTCACCAATCTA CGGCTGCCGATCCGGCAGAAGACGGTTCTCGTACTAGCCTTTGCCCTCGGCGTCTTCGTCACCGTCATCGGCGTC ATCCGCATCTACTACCTGCAGTGCGCTATCCTGGACGACTCGCCGGAGGAAGACGGAGCGCCGATGCAGAATATT ACGACGCTCGGCGGTCAGGCCGATTTCTCGAGGAGCGCCTCCTTCGCCTTGATGTGGAGCACAGTCGAGGTCAAC ATCGGCATCGCCTGTGCCTGCATCCCGACTATCAAGCCGCTCATCGCCAAGCTGTTCCCCAGGTTACTGAACGAC AGTCCCGGCAACCGGTCGCAGGCTTCCATCGACTCTCAGCTGACGCTGTGCCCGAGCCAGTCGACGTCGTCGAAC CTGACGCCGTCGGCCAAGAAGGCGGCCACGATGAAGGAGAAGCAGCTGGAGGACGAGTTTGAGACGCCGCCGGCG AGTCCCTGCGACAACACCCTCTTCGGCTTCGTCAACATGACCAAGCCGATCAACATGATCGATGCTAGCGTGGCA GAGTCCTTCCGCTTCTGTGCCATGATCTCCTCCCTCTTCTTCCTCTGGGGCGTGTCGTACGGCCTGATCGATGCC ATCAACCACGCCGTGGCCCTGGTCAGCAACATCACGACGGCCCAGTCCATCGGCCTGTCGGCCGCCTACTTTGGC GGCGGCTACTTCTTCGGGCCCCTCTTCGCCACCCGGTTCCTCCTGCGGCGCGGGCGCGACGGCGTCCTGTCGTGC GACGACGTGGGCGGCTACAAGCTGACCTTCATCACCGGCATCTGCATCTACGGCGTCGGCACCATCTCCTTCTGG CCGTCGGCGGCCCTGTCGTCCTACCCCGGCTTCTTGCTCAGCAACCTCATCGCCGGCTTCGGCTTGGCCGTCCTC GAGGTCGGCGCCAACGCCTACATCATCCTGTGTGGGCCGCCCGACTACGGCCAGTCGCGGCTCCTGGTGGCCCAG GGGATCCAGGGGCTGGGCAGCGTCGTCAGCAGCCTGCTGGGGCAAAAGGTGCTGCTCACGGGCATCGTCGCCGGC GACAGCAAGGCGCTCATCAACATCCAATGGGTCTACCTGGGCGCGACGCTCATGTGCGCCCTCATCGGCCTCTTG TTCTACTACGCGCCCTTGCCCGAGGCCACCGACGATGAGCTCGACCAGCTGGCGGGCCGCCTCCAGGTCGACCCG TGCAAGCACGTCATCGGCGGCCTGCAGCTGCGCACGGCGAGCCTCGTCCTGGCCGTCTTCACGCAGTACATGTAC GTGGCGACGCAGGAGACCAACCACCTCTTCATGCGGCCCCTCCTCCTCTCCAGCTTCGGCGTCGACATCAGCCGG GGGGAAAGCAATACGGACCAGCCGCCGGGCATGACGCTGACGATCCCCGACTACCTGCTGCTCGGACGCACGGCC TTTACCATCTCCCGCCTCCTCTTCGGCTACCTGACCTATCTGTCGGCCTCGCGTCCCCGACTGCCCAGGCCGCAC ACGTATCTCGCCATGTGCGTGGTCGCGAGCCTGGTCCTGTCCGTCGTCCGCGTCGTGGTCAACCCGTCGAACCCC AACCTGCGCGTCATCCCTATCGTGCTGATGTTCTTCGTCGAGGCCCCCATGTGGCCGCTGCTGTTCGCGCTCGGC CTGCGCGGGCAGGGGCGGAGGACGTCCACGGCGGCGGCGCTGCTCACGATGGGCGGCTCCGGGTCGGCGCTGATC CCGTACGCCATGTACGCCATCGTCCAGGCCGGCGCCACGGTGCAGGCCGCCTACGTGGTCGTCGTTGCCGTGCAG GCCACGCTCACATTGTACCCCGCCTTTCTCACGCTCAACCGGGACGCGAGACGACTGGCCGAGCCGTATTCCGCT GCGCGGCATCCGAGGCGAACGAGCCGAGACGGCACCTGA |
| Gene | >Hirsu2|887 ATGGCCGCCACCGGTGACGAGGAGCAGCGTGGGCGGCTCATCTTTGCCGTCACCATTTCCACGCTTGGCCTCGCC ACCATGCTCGTCGGCGCCCGCACCGTGAGCCGCTTCTTCATCGTCCGTAGGGTCACCTGGGACGACAAGGTCATG ATCTTGGCCTGGTTTCTCGCCTCCGGCCTCTCATTCACCGTCAGCCTCGGCGCCTTCCACGGCCTGGGAAAATCC GAGGCCGATATTTCGGATGAGAGCAAGCGCATCCTTCTCCGGTGCGAATACGTCTTCTCCATCTTATACGTAAGT CCAGTCCCCGTCTCGTCACGTCTCCCGACGGCATCTGATGCGCAAGCCTCGGCGGCAGAACCCGGCCCTCATGGC CACCAAGACGGCCATCTTGATATTCTATCTCCACCTTGCAAACAACACCCAGCTGTTCCTGCGCTATGCCTCATG GACCGTCCTGGCCATCAGCAACCTCGCCGGCTTCATCCTCACCGTCATCAACATCTTCCAGTGCACCCCGATCCA GGCGGCCTGGACTCTGTACACCTTCGACGAGACCGCCTCATGCATACCGCTCCTCACCGAGTTTATCTGCGTTAC GCCTATTAATATTATCACAGACCTGGCCATTCTCGTCTTACCCATCCCGCTCCTCACCAATCTACGGCTGCCGAT CCGGCAGAAGACGGTTCTCGTACTAGCCTTTGCCCTCGGCGTCTTCGTCACCGTCATCGGCGTCATCCGCATCTA CTACCTGCAGTGCGCTATCCTGGACGACTCGCCGGAGGAAGACGGAGCGCCGATGCAGAATATTACGACGCTCGG CGGTCAGGCCGATTTCTCGAGGAGCGCCTCCTTCGCCTTGATGTGGAGCACAGTCGAGGTCAACATCGGCATCGC CTGTGCCTGCATCCCGACTATCAAGCCGCTCATCGCCAAGCTGTTCCCCAGGTTACTGAACGACAGTCCCGGCAA CCGGTCGCAGGCTTCCATCGACTCTCAGCTGACGCTGTGCCCGAGCCAGTCGACGTCGTCGAACCTGACGCCGTC GGCCAAGAAGGCGGCCACGATGAAGGAGAAGCAGCTGGAGGACGAGTTTGAGACGCCGCCGGCGAGTCCCTGCGA CAACACCCTCTTCGGCTTCGTCAACATGACCAAGCCGATCAACATGATCGATGCTAGCGTGGCAGAGTCCTTCCG CTTCTGTGCCATGATCTCCTCCCTCTTCTTCCTCTGGGGCGTGTCGTACGGCCTGATCGATGCCATCAACCACGC CGTGGCCCTGGTCAGCAACATCACGACGGCCCAGTCCATCGGCCTGTCGGCCGCCTACTTTGGCGGCGGCTACTT CTTCGGGCCCCTCTTCGCCACCCGGTTCCTCCTGCGGCGCGGGCGCGACGGCGTCCTGTCGTGCGACGACGTGGG CGGCTACAAGCTGACCTTCATCACCGGCATCTGCATCTACGGCGTCGGCACCATCTCCTTCTGGCCGTCGGCGGC CCTGTCGTCCTACCCCGGCTTCTTGCTCAGCAACCTCATCGCCGGCTTCGGCTTGGCCGTCCTCGAGGTCGGCGC CAACGCCTACATCATCCTGTGTGGGCCGCCCGACTACGGCCAGTCGCGGCTCCTGGTGGCCCAGGGGATCCAGGG GCTGGGCAGCGTCGTCAGCAGCCTGCTGGGGCAAAAGGTGCTGCTCACGGGCATCGTCGCCGGCGACAGCAAGGC GCTCATCAACATCCAATGGGTCTACCTGGGCGCGACGCTCATGTGCGCCCTCATCGGCCTCTTGTTCTACTACGC GCCCTTGCCCGAGGCCACCGACGATGAGCTCGACCAGCTGGCGGGCCGCCTCCAGGTCGACCCGTGCAAGCACGT CATCGGCGGCCTGCAGCTGCGCACGGCGAGCCTCGTCCTGGCCGTCTTCACGCAGTACATGTACGTGGCGACGCA GGAGACCAACCACCTCTTCATGCGGCCCCTCCTCCTCTCCAGCTTCGGCGTCGACATCAGCCGGGGGGAAAGCAA TACGGACCAGCCGCCGGGCATGACGCTGACGATCCCCGACTACCTGCTGCTCGGACGCACGGCCTTTACCATCTC CCGCCTCCTCTTCGGCTACCTGACCTATCTGTCGGCCTCGCGTCCCCGACTGCCCAGGCCGCACACGTATCTCGC CATGTGCGTGGTCGCGAGCCTGGTCCTGTCCGTCGTCCGCGTCGTGGTCAACCCGTCGAACCCCAACCTGCGCGT CATCCCTATCGTGCTGATGTTCTTCGTCGAGGCCCCCATGTGGCCGCTGCTGTTCGCGCTCGGCCTGCGCGGGCA GGGGCGGAGGACGTCCACGGCGGCGGCGCTGCTCACGATGGGCGGCTCCGGGTCGGCGCTGATCCCGTACGCCAT GTACGCCATCGTCCAGGCCGGCGCCACGGTGCAGGCCGCCTACGTGGTCGTCGTTGCCGTGCAGGCCACGCTCAC ATTGTACCCCGCCTTTCTCACGCTCAACCGGGACGCGAGACGACTGGCCGAGCCGTATTCCGCTGCGCGGCATCC GAGGCGAACGAGCCGAGACGGCACCTGA |