© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|8850 |
| Gene name | |
| Location | Contig_602:10469..11804 |
| Strand | - |
| Gene length (bp) | 1335 |
| Transcript length (bp) | 1206 |
| Coding sequence length (bp) | 1206 |
| Protein length (aa) | 402 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03839 | Sec62 | Translocation protein Sec62 | 5.1E-64 | 143 | 329 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q99161|SEC62_YARLI | Translocation protein SEC62 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SEC62 PE=3 SV=2 | 115 | 337 | 2.0E-62 |
| sp|O13787|SEC62_SCHPO | Translocation protein sec62 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec62 PE=3 SV=1 | 118 | 372 | 4.0E-53 |
| sp|Q6CLZ9|SEC62_KLULA | Translocation protein SEC62 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SEC62 PE=3 SV=1 | 114 | 343 | 3.0E-31 |
| sp|Q5AI21|SEC62_CANAL | Translocation protein SEC62 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEC62 PE=3 SV=1 | 115 | 328 | 4.0E-31 |
| sp|P21825|SEC62_YEAST | Translocation protein SEC62 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC62 PE=1 SV=2 | 118 | 330 | 4.0E-29 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q99161|SEC62_YARLI | Translocation protein SEC62 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SEC62 PE=3 SV=2 | 115 | 337 | 2.0E-62 |
| sp|O13787|SEC62_SCHPO | Translocation protein sec62 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec62 PE=3 SV=1 | 118 | 372 | 4.0E-53 |
| sp|Q6CLZ9|SEC62_KLULA | Translocation protein SEC62 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SEC62 PE=3 SV=1 | 114 | 343 | 3.0E-31 |
| sp|Q5AI21|SEC62_CANAL | Translocation protein SEC62 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEC62 PE=3 SV=1 | 115 | 328 | 4.0E-31 |
| sp|P21825|SEC62_YEAST | Translocation protein SEC62 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC62 PE=1 SV=2 | 118 | 330 | 4.0E-29 |
| sp|Q6FRU9|SEC62_CANGA | Translocation protein SEC62 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC62 PE=3 SV=1 | 118 | 328 | 2.0E-28 |
| sp|Q6BI99|SEC62_DEBHA | Translocation protein SEC62 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=SEC62 PE=3 SV=1 | 118 | 330 | 3.0E-20 |
| sp|Q5R4Q3|SEC62_PONAB | Translocation protein SEC62 OS=Pongo abelii GN=SEC62 PE=2 SV=1 | 231 | 374 | 4.0E-18 |
| sp|Q99442|SEC62_HUMAN | Translocation protein SEC62 OS=Homo sapiens GN=SEC62 PE=1 SV=1 | 231 | 375 | 4.0E-18 |
| sp|Q8BU14|SEC62_MOUSE | Translocation protein SEC62 OS=Mus musculus GN=Sec62 PE=1 SV=1 | 231 | 346 | 1.0E-17 |
| sp|Q75D26|SEC62_ASHGO | Translocation protein SEC62 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC62 PE=3 SV=2 | 113 | 331 | 2.0E-17 |
| sp|Q5F3A1|SEC62_CHICK | Translocation protein SEC62 OS=Gallus gallus GN=SEC62 PE=2 SV=1 | 231 | 327 | 1.0E-15 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0015031 | protein transport | Yes |
| GO:0030176 | integral component of endoplasmic reticulum membrane | Yes |
| GO:0051179 | localization | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0071705 | nitrogen compound transport | No |
| GO:0071702 | organic substance transport | No |
| GO:0070727 | cellular macromolecule localization | No |
| GO:0031300 | intrinsic component of organelle membrane | No |
| GO:0051641 | cellular localization | No |
| GO:0045184 | establishment of protein localization | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0009987 | cellular process | No |
| GO:0031227 | intrinsic component of endoplasmic reticulum membrane | No |
| GO:0031301 | integral component of organelle membrane | No |
| GO:0008104 | protein localization | No |
| GO:0033036 | macromolecule localization | No |
| GO:0016021 | integral component of membrane | No |
| GO:0006810 | transport | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 244 | 266 | 22 |
| 2 | 273 | 295 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|8850 MAGQPPPFPPPGEMPPGMQRPTPEQIAEIQRRVAEDAQKAGMTVPEFIEHIKKQAMEQQRQRMMQQQQGHDGHDH DHDHGHGHDHSHDGHGCEHDHGHHHNHQAQSQPINPGPPNPKALAVAKFLRGQELKPRTCILNGERKDMFRVKRA LRALQSPAYEKARKKNPLLPEITDQASLENTFKLLPLSMLALRVSKIEMESGSNGKKPKRVKGQWNVRVEQQQEA KDDMYYAWLWEGSQIKRQLYAALALVLIFVVVLYPLWPLKLRQGVYYLSWGLLGLLGLFFLMAIFRVILFCVTYF VLKPGLWLYPNLWEDVSFMDSFRPVWAWHETAEEKKLKKKSKKRGKASTSGAGTNATFAAATGQVAPTTATTTGT DTQIKTGDMHQRPYMAPKVEELADDE* |
| Coding | >Hirsu2|8850 ATGGCAGGGCAGCCGCCTCCGTTCCCGCCGCCGGGCGAGATGCCGCCCGGCATGCAGCGGCCGACGCCCGAGCAG ATCGCCGAGATCCAGCGCCGGGTGGCCGAGGACGCGCAGAAGGCCGGCATGACGGTGCCCGAGTTCATCGAGCAC ATCAAGAAGCAGGCCATGGAGCAGCAGCGCCAACGCATGATGCAGCAGCAGCAAGGCCACGACGGCCACGACCAC GACCACGACCACGGCCACGGCCACGACCACAGCCACGACGGCCACGGCTGCGAGCACGACCACGGCCACCACCAC AACCACCAGGCCCAGTCCCAGCCCATTAACCCCGGCCCGCCCAACCCCAAGGCGCTCGCCGTCGCCAAGTTCCTC CGCGGCCAGGAGCTCAAGCCACGCACCTGCATCCTGAACGGCGAGCGCAAAGACATGTTCAGAGTCAAGCGTGCC TTGCGCGCGCTGCAGTCGCCCGCCTACGAGAAGGCGCGGAAGAAGAACCCGCTGCTCCCGGAGATCACGGACCAG GCCTCGCTGGAGAACACGTTCAAGCTGCTGCCCCTCAGCATGCTCGCCCTGCGCGTCTCCAAGATCGAGATGGAG TCGGGCTCGAACGGCAAGAAGCCGAAGCGCGTAAAGGGCCAGTGGAACGTCCGCGTCGAGCAGCAGCAGGAGGCC AAGGACGACATGTACTACGCCTGGCTGTGGGAGGGCAGCCAGATCAAGCGCCAGCTGTACGCTGCCCTGGCCCTC GTCCTCATCTTCGTCGTCGTCCTCTACCCGCTCTGGCCCCTCAAGCTCCGCCAGGGCGTCTACTACCTGAGCTGG GGCCTGCTGGGCCTGCTGGGCCTCTTCTTCCTCATGGCCATCTTCCGCGTCATCCTCTTCTGCGTCACCTACTTC GTCCTCAAGCCCGGCCTGTGGCTCTACCCCAACCTGTGGGAGGACGTCTCCTTCATGGACAGCTTCAGGCCCGTC TGGGCCTGGCACGAGACTGCCGAGGAAAAGAAGCTGAAGAAGAAGTCGAAGAAGAGGGGCAAGGCATCCACGTCC GGCGCGGGCACCAACGCCACCTTCGCGGCCGCCACCGGCCAGGTGGCGCCCACGACGGCCACGACGACGGGCACC GATACCCAGATCAAGACGGGCGACATGCATCAGCGGCCCTACATGGCGCCCAAGGTCGAGGAGCTGGCCGACGAC GAGTGA |
| Transcript | >Hirsu2|8850 ATGGCAGGGCAGCCGCCTCCGTTCCCGCCGCCGGGCGAGATGCCGCCCGGCATGCAGCGGCCGACGCCCGAGCAG ATCGCCGAGATCCAGCGCCGGGTGGCCGAGGACGCGCAGAAGGCCGGCATGACGGTGCCCGAGTTCATCGAGCAC ATCAAGAAGCAGGCCATGGAGCAGCAGCGCCAACGCATGATGCAGCAGCAGCAAGGCCACGACGGCCACGACCAC GACCACGACCACGGCCACGGCCACGACCACAGCCACGACGGCCACGGCTGCGAGCACGACCACGGCCACCACCAC AACCACCAGGCCCAGTCCCAGCCCATTAACCCCGGCCCGCCCAACCCCAAGGCGCTCGCCGTCGCCAAGTTCCTC CGCGGCCAGGAGCTCAAGCCACGCACCTGCATCCTGAACGGCGAGCGCAAAGACATGTTCAGAGTCAAGCGTGCC TTGCGCGCGCTGCAGTCGCCCGCCTACGAGAAGGCGCGGAAGAAGAACCCGCTGCTCCCGGAGATCACGGACCAG GCCTCGCTGGAGAACACGTTCAAGCTGCTGCCCCTCAGCATGCTCGCCCTGCGCGTCTCCAAGATCGAGATGGAG TCGGGCTCGAACGGCAAGAAGCCGAAGCGCGTAAAGGGCCAGTGGAACGTCCGCGTCGAGCAGCAGCAGGAGGCC AAGGACGACATGTACTACGCCTGGCTGTGGGAGGGCAGCCAGATCAAGCGCCAGCTGTACGCTGCCCTGGCCCTC GTCCTCATCTTCGTCGTCGTCCTCTACCCGCTCTGGCCCCTCAAGCTCCGCCAGGGCGTCTACTACCTGAGCTGG GGCCTGCTGGGCCTGCTGGGCCTCTTCTTCCTCATGGCCATCTTCCGCGTCATCCTCTTCTGCGTCACCTACTTC GTCCTCAAGCCCGGCCTGTGGCTCTACCCCAACCTGTGGGAGGACGTCTCCTTCATGGACAGCTTCAGGCCCGTC TGGGCCTGGCACGAGACTGCCGAGGAAAAGAAGCTGAAGAAGAAGTCGAAGAAGAGGGGCAAGGCATCCACGTCC GGCGCGGGCACCAACGCCACCTTCGCGGCCGCCACCGGCCAGGTGGCGCCCACGACGGCCACGACGACGGGCACC GATACCCAGATCAAGACGGGCGACATGCATCAGCGGCCCTACATGGCGCCCAAGGTCGAGGAGCTGGCCGACGAC GAGTGA |
| Gene | >Hirsu2|8850 ATGGCAGGGCAGCCGCCTCCGTTCCCGCCGCCGGGCGAGATGCCGCCCGGCATGCAGCGGCCGACGCCCGAGCAG ATCGCCGAGATCCAGCGCCGGGTGGCCGAGGACGCGCAGAAGGCCGGCATGACGGTGCCCGAGTTCATCGAGCAC ATCAAGAAGCAGGCCATGGAGCAGCAGCGCCAACGCATGATGCAGCAGCAGCAAGGCCACGACGGCCACGACCAC GACCACGACCACGGCCACGGCCACGACCACAGCCACGACGGCCACGGCTGCGAGCACGACCACGGCCACCACCAC AACCACCAGGCCCAGTCCCAGCCCATTAACCCCGGCCCGCCCAACCCCAAGGCGCTCGCCGTCGCCAAGTTCCTC CGCGGCCAGGAGCTCAAGCCACGCACCTGCATCCTGAACGGCGAGCGCAAAGACATGTTCAGAGGTAAGGCTCCT CCTCCGTCCATTCGGCGCGCGCCCAGCTGACCCGTGCCCCTCCCCAATGACAGTCAAGCGTGCCTTGCGCGCGCT GCAGTCGCCCGCCTACGAGAAGGCGCGGAAGAAGAACCCGCTGCTCCCGGAGATCACGGACCAGGCCTCGCTGGA GAACACGTTCAAGCTGCTGCCCCTCAGCATGCTCGCCCTGCGCGTCTCCAAGATCGAGATGGAGTCGGGCTCGAA CGGCAAGAAGCCGAAGCGCGTAAAGGGCCAGTGGAACGTCCGCGTCGAGCAGCAGCAGGAGGCCAAGGACGACAT GTACTACGCCTGGCTGTGGGAGGGCAGCCAGATCAAGCGCCAGCTGTACGCTGCCCTGGCCCTCGTCCTCATCTT CGTCGTCGTCCTCTACCCGCTCTGGCCCCTCAAGCTCCGCCAGGGCGTCTACTACCTGAGCTGGGGCCTGCTGGG CCTGCTGGGCCTCTTCTTCCTCATGGCCATCTTCCGCGTCATCCTCTTCTGCGTCACCTACTTCGTCCTCAAGCC CGGCCTGTGGCTCTACCCCAACCTGTGGGAGGACGTCTCCTTCATGGACAGCTTCAGGCCCGTCTGGGCCTGGCA CGAGGTGCGTGTCGTCTTCCTCCCCGCTCCTCTCCGCTCCTCTCCGCTAACATGCTCGCCTCTCCGCAGACTGCC GAGGAAAAGAAGCTGAAGAAGAAGTCGAAGAAGAGGGGCAAGGCATCCACGTCCGGCGCGGGCACCAACGCCACC TTCGCGGCCGCCACCGGCCAGGTGGCGCCCACGACGGCCACGACGACGGGCACCGATACCCAGATCAAGACGGGC GACATGCATCAGCGGCCCTACATGGCGCCCAAGGTCGAGGAGCTGGCCGACGACGAGTGA |