Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8849
Gene name
LocationContig_602:8580..10080
Strand+
Gene length (bp)1500
Transcript length (bp)996
Coding sequence length (bp)996
Protein length (aa) 332

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00445 Ribonuclease_T2 Ribonuclease T2 family 2.0E-37 61 280

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q5AKB1|RNY1B_CANAL Ribonuclease T2-like 1-B OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RNY1-B PE=3 SV=1 39 302 5.0E-37
sp|Q5AK94|RNY1A_CANAL Ribonuclease T2-like 1-A OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RNY1-A PE=3 SV=1 39 302 8.0E-37
sp|P10281|RNT2_ASPOR Ribonuclease T2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=rntB PE=1 SV=2 50 322 5.0E-35
sp|P24657|RNTR_HYPRU Ribonuclease Trv OS=Hypocrea rufa PE=1 SV=1 50 290 5.0E-35
sp|P81296|RNL2_LENED Ribonuclease Le2 OS=Lentinula edodes PE=1 SV=1 39 316 5.0E-35
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Swissprot ID Swissprot Description Start End E-value
sp|Q5AKB1|RNY1B_CANAL Ribonuclease T2-like 1-B OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RNY1-B PE=3 SV=1 39 302 5.0E-37
sp|Q5AK94|RNY1A_CANAL Ribonuclease T2-like 1-A OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RNY1-A PE=3 SV=1 39 302 8.0E-37
sp|P10281|RNT2_ASPOR Ribonuclease T2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=rntB PE=1 SV=2 50 322 5.0E-35
sp|P24657|RNTR_HYPRU Ribonuclease Trv OS=Hypocrea rufa PE=1 SV=1 50 290 5.0E-35
sp|P81296|RNL2_LENED Ribonuclease Le2 OS=Lentinula edodes PE=1 SV=1 39 316 5.0E-35
sp|Q6CAV7|RNY1_YARLI Ribonuclease T2-like OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RNY1 PE=3 SV=1 5 304 9.0E-33
sp|Q4WXZ5|RNY1_ASPFU Ribonuclease T2-like OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rny1 PE=3 SV=2 51 289 2.0E-31
sp|Q5B3K6|RNY1_EMENI Ribonuclease T2-like OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rny1 PE=3 SV=1 51 310 4.0E-31
sp|Q6BHB1|RNY1_DEBHA Ribonuclease T2-like OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=RNY1 PE=3 SV=2 50 304 6.0E-31
sp|Q6FP42|RNY1_CANGA Ribonuclease T2-like OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RNY1 PE=3 SV=1 39 326 5.0E-30
sp|P19791|RNM_ASPPH Ribonuclease M OS=Aspergillus phoenicis PE=1 SV=1 39 302 9.0E-30
sp|Q02933|RNY1_YEAST Ribonuclease T2-like OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RNY1 PE=1 SV=1 39 304 4.0E-29
sp|Q75BW5|RNY1_ASHGO Ribonuclease T2-like OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RNY1 PE=3 SV=1 35 256 3.0E-26
sp|Q6CRT6|RNY1_KLULA Ribonuclease T2-like OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=RNY1 PE=3 SV=1 40 311 7.0E-23
sp|P08056|RNRH_RHINI Ribonuclease Rh OS=Rhizopus niveus PE=1 SV=1 39 260 7.0E-20
sp|Q7M438|RNDI_DICDI Ribonuclease DdI OS=Dictyostelium discoideum GN=ddiA PE=1 SV=3 84 261 1.0E-15
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GO

GO Term Description Terminal node
GO:0003723 RNA binding Yes
GO:0033897 ribonuclease T2 activity Yes
GO:0016849 phosphorus-oxygen lyase activity No
GO:0003674 molecular_function No
GO:0140098 catalytic activity, acting on RNA No
GO:0003676 nucleic acid binding No
GO:0016787 hydrolase activity No
GO:0004518 nuclease activity No
GO:0004521 endoribonuclease activity No
GO:0016788 hydrolase activity, acting on ester bonds No
GO:0004519 endonuclease activity No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No
GO:0016829 lyase activity No
GO:0003824 catalytic activity No
GO:0097159 organic cyclic compound binding No
GO:0004540 ribonuclease activity No
GO:0140640 catalytic activity, acting on a nucleic acid No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1393 0.0634 0.9631 0.1278 0.2333 0.0596 0.2994 0.4576 0.305 0.0088

SignalP

SignalP signal predicted Location Score
Yes 1 - 19 0.999781

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4311
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|994
Ophiocordyceps australis map64 (Brazil) OphauB2|3141
Ophiocordyceps australis map64 (Brazil) OphauB2|3371
Ophiocordyceps camponoti-floridani Ophcf2|02540
Ophiocordyceps camponoti-rufipedis Ophun1|4431
Ophiocordyceps kimflemingae Ophio5|3092
Ophiocordyceps subramaniannii Hirsu2|8849 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8849
MRRAAAVACIAALPQLTAAGLYPGMTAENHTCALFPDVLSCSPDARPDKVKDTCCAETYGGLLVATQIWDTFTGR
ESEGQVYPRKAWTIHGLWPDFCNGSYPQYCDLSRQYDPSPSPNTTDGTPGGTPVPAYEGEPIERWFADYGRLDLL
AYMRNFWVSRSQPNWAFWAHEFSKHATCFSTFQKECYGPQAAAHADLFDFFETAVALHRPLRTHRWLARDGIRPS
NGMGYSLARLQHVLTAGFGREPLLLCAGPRFNETAAGRGSADAGRTHLAEVWYYLHVHGRPQRGRVQRLDARDRS
NCAEAEGAVWYRERAEGSERRAGTPPLTGAL*
Coding >Hirsu2|8849
ATGCGTCGTGCGGCTGCCGTAGCGTGCATTGCGGCGCTGCCCCAGCTCACCGCAGCCGGCCTGTACCCCGGCATG
ACGGCCGAGAACCACACGTGCGCGCTCTTCCCGGACGTGCTCTCCTGCTCCCCCGACGCCCGGCCGGACAAGGTC
AAGGATACGTGCTGCGCCGAGACCTATGGCGGCCTGCTGGTCGCCACCCAGATATGGGACACCTTCACCGGCCGG
GAGAGCGAGGGCCAGGTCTATCCGCGCAAGGCCTGGACGATTCACGGCCTCTGGCCCGACTTCTGCAATGGTTCC
TATCCGCAGTACTGCGATCTGAGCCGGCAGTACGATCCGTCGCCGTCGCCCAACACAACCGACGGGACGCCGGGC
GGGACTCCCGTCCCCGCGTACGAGGGCGAGCCGATTGAGCGCTGGTTCGCCGACTACGGGAGGCTGGATCTGCTG
GCGTACATGCGCAACTTCTGGGTCAGCCGGTCGCAGCCCAACTGGGCCTTCTGGGCCCACGAGTTCTCCAAGCAC
GCGACCTGCTTCTCTACCTTTCAGAAGGAGTGCTACGGCCCGCAAGCCGCCGCGCACGCCGACCTCTTCGACTTC
TTCGAGACGGCCGTCGCCCTGCACCGCCCGCTGCGCACCCACCGCTGGCTCGCGCGCGACGGCATCCGGCCGTCC
AACGGCATGGGCTACTCGCTGGCGCGCCTCCAGCACGTCCTGACGGCCGGCTTCGGCCGAGAGCCCCTGCTCCTC
TGCGCCGGGCCGCGCTTCAACGAGACGGCCGCCGGCCGCGGCTCCGCCGACGCCGGCCGCACCCACCTCGCCGAG
GTCTGGTACTACCTGCACGTCCACGGCCGCCCGCAGCGCGGCCGCGTCCAGAGGCTGGACGCCCGCGACAGGTCC
AACTGTGCCGAGGCCGAGGGCGCCGTCTGGTACCGCGAGCGCGCCGAGGGCAGCGAGCGCCGGGCCGGCACACCG
CCGTTGACGGGGGCTCTTTGA
Transcript >Hirsu2|8849
ATGCGTCGTGCGGCTGCCGTAGCGTGCATTGCGGCGCTGCCCCAGCTCACCGCAGCCGGCCTGTACCCCGGCATG
ACGGCCGAGAACCACACGTGCGCGCTCTTCCCGGACGTGCTCTCCTGCTCCCCCGACGCCCGGCCGGACAAGGTC
AAGGATACGTGCTGCGCCGAGACCTATGGCGGCCTGCTGGTCGCCACCCAGATATGGGACACCTTCACCGGCCGG
GAGAGCGAGGGCCAGGTCTATCCGCGCAAGGCCTGGACGATTCACGGCCTCTGGCCCGACTTCTGCAATGGTTCC
TATCCGCAGTACTGCGATCTGAGCCGGCAGTACGATCCGTCGCCGTCGCCCAACACAACCGACGGGACGCCGGGC
GGGACTCCCGTCCCCGCGTACGAGGGCGAGCCGATTGAGCGCTGGTTCGCCGACTACGGGAGGCTGGATCTGCTG
GCGTACATGCGCAACTTCTGGGTCAGCCGGTCGCAGCCCAACTGGGCCTTCTGGGCCCACGAGTTCTCCAAGCAC
GCGACCTGCTTCTCTACCTTTCAGAAGGAGTGCTACGGCCCGCAAGCCGCCGCGCACGCCGACCTCTTCGACTTC
TTCGAGACGGCCGTCGCCCTGCACCGCCCGCTGCGCACCCACCGCTGGCTCGCGCGCGACGGCATCCGGCCGTCC
AACGGCATGGGCTACTCGCTGGCGCGCCTCCAGCACGTCCTGACGGCCGGCTTCGGCCGAGAGCCCCTGCTCCTC
TGCGCCGGGCCGCGCTTCAACGAGACGGCCGCCGGCCGCGGCTCCGCCGACGCCGGCCGCACCCACCTCGCCGAG
GTCTGGTACTACCTGCACGTCCACGGCCGCCCGCAGCGCGGCCGCGTCCAGAGGCTGGACGCCCGCGACAGGTCC
AACTGTGCCGAGGCCGAGGGCGCCGTCTGGTACCGCGAGCGCGCCGAGGGCAGCGAGCGCCGGGCCGGCACACCG
CCGTTGACGGGGGCTCTTTGA
Gene >Hirsu2|8849
ATGCGTCGTGCGGCTGCCGTAGCGTGCATTGCGGCGCTGCCCCAGCTCACCGCAGCCGGCCTGTACCCCGGCATG
ACGGCCGAGAACCACACGTGCGCGCTCTGTGAGTTCCATCGGGCGCGCCTGTGCCTCTCTGGCTGCTCCCGATCC
GGCCGCGCCCTTCTCCCTGCCCGTCGAAGCGCACGGTACCAAGCGCAGACGGCTGACCAGCTCGGGGGCAGTCCC
GGACGTGCTCTCCTGCTCCCCCGACGCCCGGCCGGACAAGGTCAAGGATACGTGCTGCGCCGAGACCTATGGCGG
CCTGCTGGTGAGCGCATCCTCGGTCCTGCCGAGCCTCGACCTCCTTTCCCGCTGCCGGCGCTGAAACCGGCCCCC
CTCGCGGCGCAGGTCGCCACCCAGATATGGGACACCTTCACCGGCCGGGAGAGCGAGGGCCAGGTCTATCCGCGC
AAGGCCTGGACGATTCACGGCCTCTGGCCCGGTGGGTTGCGCCGGCCGCGCGACGACTGCCGTGGGCAGCGGATG
CTGACGCCGCGGCGCCGCCTCGTCCAGACTTCTGCAATGGTGACGACTGTCCCGCCCCGAGCCGGGACCGGGCCG
TGTTGACGAGAGGCGCAGGTTCCTATCCGCAGTACTGCGATCTGAGGTGAGACGGCCCAGGGCCTCGAGCAGCAG
GCCGTCCGCTCTGGCCTGCCCTCTCCCGAGCCTCGCTCACCCCGTTGCCCAGCCGGCAGTACGATCCGTCGCCGT
CGCCCAACACAACCGACGGGACGCCGGGCGGGACTCCCGTCCCCGCGTACGAGGGCGAGCCGATTGAGCGCTGGT
TCGCCGACTACGGGAGGCTGGATCTGCTGGCGTACATGCGCAACTTCTGGGTCAGCCGGTCGCAGCCCAACTGGG
CCTTCTGGGCCCACGAGTTCTCCAAGCACGCGACCTGCTTCTCTACCTTTCAGAAGGAGTGCTACGTGAGTCTTC
TTCTTCTTCACTTTCCCCTCCTCCTCCTCCTCCCCGTGCCGGCTCGCTCACGCCGATACCCCGGCCGGCCGCGAC
GGGCGACAACCACAGGGCCCGCAAGCCGCCGCGCACGCCGACCTCTTCGACTTCTTCGAGACGGCCGTCGCCCTG
CACCGCCCGCTGCGCACCCACCGCTGGCTCGCGCGCGACGGCATCCGGCCGTCCAACGGCATGGGCTACTCGCTG
GCGCGCCTCCAGCACGTCCTGACGGCCGGCTTCGGCCGAGAGCCCCTGCTCCTCTGCGCCGGGCCGCGCTTCAAC
GAGACGGCCGCCGGCCGCGGCTCCGCCGACGCCGGCCGCACCCACCTCGCCGAGGTCTGGTACTACCTGCACGTC
CACGGCCGCCCGCAGCGCGGCCGCGTCCAGAGGCTGGACGCCCGCGACAGGTCCAACTGTGCCGAGGCCGAGGGC
GCCGTCTGGTACCGCGAGCGCGCCGAGGGCAGCGAGCGCCGGGCCGGCACACCGCCGTTGACGGGGGCTCTTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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