Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8849
Gene name
LocationContig_602:8580..10080
Strand+
Gene length (bp)1500
Transcript length (bp)996
Coding sequence length (bp)996
Protein length (aa) 332

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00445 Ribonuclease_T2 Ribonuclease T2 family 2.0E-37 61 280

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q5AKB1|RNY1B_CANAL Ribonuclease T2-like 1-B OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RNY1-B PE=3 SV=1 39 302 5.0E-37
sp|Q5AK94|RNY1A_CANAL Ribonuclease T2-like 1-A OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RNY1-A PE=3 SV=1 39 302 8.0E-37
sp|P10281|RNT2_ASPOR Ribonuclease T2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=rntB PE=1 SV=2 50 322 5.0E-35
sp|P24657|RNTR_HYPRU Ribonuclease Trv OS=Hypocrea rufa PE=1 SV=1 50 290 5.0E-35
sp|P81296|RNL2_LENED Ribonuclease Le2 OS=Lentinula edodes PE=1 SV=1 39 316 5.0E-35
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Swissprot ID Swissprot Description Start End E-value
sp|Q5AKB1|RNY1B_CANAL Ribonuclease T2-like 1-B OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RNY1-B PE=3 SV=1 39 302 5.0E-37
sp|Q5AK94|RNY1A_CANAL Ribonuclease T2-like 1-A OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RNY1-A PE=3 SV=1 39 302 8.0E-37
sp|P10281|RNT2_ASPOR Ribonuclease T2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=rntB PE=1 SV=2 50 322 5.0E-35
sp|P24657|RNTR_HYPRU Ribonuclease Trv OS=Hypocrea rufa PE=1 SV=1 50 290 5.0E-35
sp|P81296|RNL2_LENED Ribonuclease Le2 OS=Lentinula edodes PE=1 SV=1 39 316 5.0E-35
sp|Q6CAV7|RNY1_YARLI Ribonuclease T2-like OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RNY1 PE=3 SV=1 5 304 9.0E-33
sp|Q4WXZ5|RNY1_ASPFU Ribonuclease T2-like OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rny1 PE=3 SV=2 51 289 2.0E-31
sp|Q5B3K6|RNY1_EMENI Ribonuclease T2-like OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rny1 PE=3 SV=1 51 310 4.0E-31
sp|Q6BHB1|RNY1_DEBHA Ribonuclease T2-like OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=RNY1 PE=3 SV=2 50 304 6.0E-31
sp|Q6FP42|RNY1_CANGA Ribonuclease T2-like OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RNY1 PE=3 SV=1 39 326 5.0E-30
sp|P19791|RNM_ASPPH Ribonuclease M OS=Aspergillus phoenicis PE=1 SV=1 39 302 9.0E-30
sp|Q02933|RNY1_YEAST Ribonuclease T2-like OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RNY1 PE=1 SV=1 39 304 4.0E-29
sp|Q75BW5|RNY1_ASHGO Ribonuclease T2-like OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RNY1 PE=3 SV=1 35 256 3.0E-26
sp|Q6CRT6|RNY1_KLULA Ribonuclease T2-like OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=RNY1 PE=3 SV=1 40 311 7.0E-23
sp|P08056|RNRH_RHINI Ribonuclease Rh OS=Rhizopus niveus PE=1 SV=1 39 260 7.0E-20
sp|Q7M438|RNDI_DICDI Ribonuclease DdI OS=Dictyostelium discoideum GN=ddiA PE=1 SV=3 84 261 1.0E-15
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GO

GO Term Description Terminal node
GO:0003723 RNA binding Yes
GO:0033897 ribonuclease T2 activity Yes
GO:0016849 phosphorus-oxygen lyase activity No
GO:0003674 molecular_function No
GO:0140098 catalytic activity, acting on RNA No
GO:0003676 nucleic acid binding No
GO:0016787 hydrolase activity No
GO:0004518 nuclease activity No
GO:0004521 endoribonuclease activity No
GO:0016788 hydrolase activity, acting on ester bonds No
GO:0004519 endonuclease activity No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No
GO:0016829 lyase activity No
GO:0003824 catalytic activity No
GO:0097159 organic cyclic compound binding No
GO:0004540 ribonuclease activity No
GO:0140640 catalytic activity, acting on a nucleic acid No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8849
MRRAAAVACIAALPQLTAAGLYPGMTAENHTCALFPDVLSCSPDARPDKVKDTCCAETYGGLLVATQIWDTFTGR
ESEGQVYPRKAWTIHGLWPDFCNGSYPQYCDLSRQYDPSPSPNTTDGTPGGTPVPAYEGEPIERWFADYGRLDLL
AYMRNFWVSRSQPNWAFWAHEFSKHATCFSTFQKECYGPQAAAHADLFDFFETAVALHRPLRTHRWLARDGIRPS
NGMGYSLARLQHVLTAGFGREPLLLCAGPRFNETAAGRGSADAGRTHLAEVWYYLHVHGRPQRGRVQRLDARDRS
NCAEAEGAVWYRERAEGSERRAGTPPLTGAL*
Coding >Hirsu2|8849
ATGCGTCGTGCGGCTGCCGTAGCGTGCATTGCGGCGCTGCCCCAGCTCACCGCAGCCGGCCTGTACCCCGGCATG
ACGGCCGAGAACCACACGTGCGCGCTCTTCCCGGACGTGCTCTCCTGCTCCCCCGACGCCCGGCCGGACAAGGTC
AAGGATACGTGCTGCGCCGAGACCTATGGCGGCCTGCTGGTCGCCACCCAGATATGGGACACCTTCACCGGCCGG
GAGAGCGAGGGCCAGGTCTATCCGCGCAAGGCCTGGACGATTCACGGCCTCTGGCCCGACTTCTGCAATGGTTCC
TATCCGCAGTACTGCGATCTGAGCCGGCAGTACGATCCGTCGCCGTCGCCCAACACAACCGACGGGACGCCGGGC
GGGACTCCCGTCCCCGCGTACGAGGGCGAGCCGATTGAGCGCTGGTTCGCCGACTACGGGAGGCTGGATCTGCTG
GCGTACATGCGCAACTTCTGGGTCAGCCGGTCGCAGCCCAACTGGGCCTTCTGGGCCCACGAGTTCTCCAAGCAC
GCGACCTGCTTCTCTACCTTTCAGAAGGAGTGCTACGGCCCGCAAGCCGCCGCGCACGCCGACCTCTTCGACTTC
TTCGAGACGGCCGTCGCCCTGCACCGCCCGCTGCGCACCCACCGCTGGCTCGCGCGCGACGGCATCCGGCCGTCC
AACGGCATGGGCTACTCGCTGGCGCGCCTCCAGCACGTCCTGACGGCCGGCTTCGGCCGAGAGCCCCTGCTCCTC
TGCGCCGGGCCGCGCTTCAACGAGACGGCCGCCGGCCGCGGCTCCGCCGACGCCGGCCGCACCCACCTCGCCGAG
GTCTGGTACTACCTGCACGTCCACGGCCGCCCGCAGCGCGGCCGCGTCCAGAGGCTGGACGCCCGCGACAGGTCC
AACTGTGCCGAGGCCGAGGGCGCCGTCTGGTACCGCGAGCGCGCCGAGGGCAGCGAGCGCCGGGCCGGCACACCG
CCGTTGACGGGGGCTCTTTGA
Transcript >Hirsu2|8849
ATGCGTCGTGCGGCTGCCGTAGCGTGCATTGCGGCGCTGCCCCAGCTCACCGCAGCCGGCCTGTACCCCGGCATG
ACGGCCGAGAACCACACGTGCGCGCTCTTCCCGGACGTGCTCTCCTGCTCCCCCGACGCCCGGCCGGACAAGGTC
AAGGATACGTGCTGCGCCGAGACCTATGGCGGCCTGCTGGTCGCCACCCAGATATGGGACACCTTCACCGGCCGG
GAGAGCGAGGGCCAGGTCTATCCGCGCAAGGCCTGGACGATTCACGGCCTCTGGCCCGACTTCTGCAATGGTTCC
TATCCGCAGTACTGCGATCTGAGCCGGCAGTACGATCCGTCGCCGTCGCCCAACACAACCGACGGGACGCCGGGC
GGGACTCCCGTCCCCGCGTACGAGGGCGAGCCGATTGAGCGCTGGTTCGCCGACTACGGGAGGCTGGATCTGCTG
GCGTACATGCGCAACTTCTGGGTCAGCCGGTCGCAGCCCAACTGGGCCTTCTGGGCCCACGAGTTCTCCAAGCAC
GCGACCTGCTTCTCTACCTTTCAGAAGGAGTGCTACGGCCCGCAAGCCGCCGCGCACGCCGACCTCTTCGACTTC
TTCGAGACGGCCGTCGCCCTGCACCGCCCGCTGCGCACCCACCGCTGGCTCGCGCGCGACGGCATCCGGCCGTCC
AACGGCATGGGCTACTCGCTGGCGCGCCTCCAGCACGTCCTGACGGCCGGCTTCGGCCGAGAGCCCCTGCTCCTC
TGCGCCGGGCCGCGCTTCAACGAGACGGCCGCCGGCCGCGGCTCCGCCGACGCCGGCCGCACCCACCTCGCCGAG
GTCTGGTACTACCTGCACGTCCACGGCCGCCCGCAGCGCGGCCGCGTCCAGAGGCTGGACGCCCGCGACAGGTCC
AACTGTGCCGAGGCCGAGGGCGCCGTCTGGTACCGCGAGCGCGCCGAGGGCAGCGAGCGCCGGGCCGGCACACCG
CCGTTGACGGGGGCTCTTTGA
Gene >Hirsu2|8849
ATGCGTCGTGCGGCTGCCGTAGCGTGCATTGCGGCGCTGCCCCAGCTCACCGCAGCCGGCCTGTACCCCGGCATG
ACGGCCGAGAACCACACGTGCGCGCTCTGTGAGTTCCATCGGGCGCGCCTGTGCCTCTCTGGCTGCTCCCGATCC
GGCCGCGCCCTTCTCCCTGCCCGTCGAAGCGCACGGTACCAAGCGCAGACGGCTGACCAGCTCGGGGGCAGTCCC
GGACGTGCTCTCCTGCTCCCCCGACGCCCGGCCGGACAAGGTCAAGGATACGTGCTGCGCCGAGACCTATGGCGG
CCTGCTGGTGAGCGCATCCTCGGTCCTGCCGAGCCTCGACCTCCTTTCCCGCTGCCGGCGCTGAAACCGGCCCCC
CTCGCGGCGCAGGTCGCCACCCAGATATGGGACACCTTCACCGGCCGGGAGAGCGAGGGCCAGGTCTATCCGCGC
AAGGCCTGGACGATTCACGGCCTCTGGCCCGGTGGGTTGCGCCGGCCGCGCGACGACTGCCGTGGGCAGCGGATG
CTGACGCCGCGGCGCCGCCTCGTCCAGACTTCTGCAATGGTGACGACTGTCCCGCCCCGAGCCGGGACCGGGCCG
TGTTGACGAGAGGCGCAGGTTCCTATCCGCAGTACTGCGATCTGAGGTGAGACGGCCCAGGGCCTCGAGCAGCAG
GCCGTCCGCTCTGGCCTGCCCTCTCCCGAGCCTCGCTCACCCCGTTGCCCAGCCGGCAGTACGATCCGTCGCCGT
CGCCCAACACAACCGACGGGACGCCGGGCGGGACTCCCGTCCCCGCGTACGAGGGCGAGCCGATTGAGCGCTGGT
TCGCCGACTACGGGAGGCTGGATCTGCTGGCGTACATGCGCAACTTCTGGGTCAGCCGGTCGCAGCCCAACTGGG
CCTTCTGGGCCCACGAGTTCTCCAAGCACGCGACCTGCTTCTCTACCTTTCAGAAGGAGTGCTACGTGAGTCTTC
TTCTTCTTCACTTTCCCCTCCTCCTCCTCCTCCCCGTGCCGGCTCGCTCACGCCGATACCCCGGCCGGCCGCGAC
GGGCGACAACCACAGGGCCCGCAAGCCGCCGCGCACGCCGACCTCTTCGACTTCTTCGAGACGGCCGTCGCCCTG
CACCGCCCGCTGCGCACCCACCGCTGGCTCGCGCGCGACGGCATCCGGCCGTCCAACGGCATGGGCTACTCGCTG
GCGCGCCTCCAGCACGTCCTGACGGCCGGCTTCGGCCGAGAGCCCCTGCTCCTCTGCGCCGGGCCGCGCTTCAAC
GAGACGGCCGCCGGCCGCGGCTCCGCCGACGCCGGCCGCACCCACCTCGCCGAGGTCTGGTACTACCTGCACGTC
CACGGCCGCCCGCAGCGCGGCCGCGTCCAGAGGCTGGACGCCCGCGACAGGTCCAACTGTGCCGAGGCCGAGGGC
GCCGTCTGGTACCGCGAGCGCGCCGAGGGCAGCGAGCGCCGGGCCGGCACACCGCCGTTGACGGGGGCTCTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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