© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|8848 |
| Gene name | |
| Location | Contig_602:6620..7721 |
| Strand | + |
| Gene length (bp) | 1101 |
| Transcript length (bp) | 855 |
| Coding sequence length (bp) | 855 |
| Protein length (aa) | 285 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08445 | FR47 | FR47-like protein | 9.6E-07 | 202 | 259 |
| PF00583 | Acetyltransf_1 | Acetyltransferase (GNAT) family | 1.2E-06 | 174 | 257 |
| PF13673 | Acetyltransf_10 | Acetyltransferase (GNAT) domain | 1.6E-05 | 203 | 262 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P16966|TTR_PSEAJ | Acetyltransferase OS=Pseudomonas amygdali pv. tabaci GN=ttr PE=1 SV=1 | 111 | 284 | 4.0E-14 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | Yes |
| GO:0008080 | N-acetyltransferase activity | Yes |
| GO:0016407 | acetyltransferase activity | No |
| GO:0016410 | N-acyltransferase activity | No |
| GO:0016740 | transferase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016746 | acyltransferase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|8848 MIQRSRPRRTEPASSRLATTTDDPPWPCRRATTTCSSEEPETGAGDGRLSNWLLSPSQTHVCLVALCMPSIIVAS SPASPSKPRTRLWPDRPRDERIMSHAPPPGLVLPFSSKAHAHLTPYLAAIHASCITHDRAIATFLPPLSHEKLLS WWKERIAEVNDGKRLIWILVSELDASARPRGPEVMGVVMLAMPYSETGPFRGLVEKLLVHKSFRGRGGARALMGA LESDAAKLGRTVLLLDTETDSPAEAVCKKLGYIEMGRIPRYGMSPSGELKDGTFLYKHL* |
| Coding | >Hirsu2|8848 ATGATCCAACGCTCTCGACCGAGGCGGACGGAGCCGGCGAGCTCCCGCCTGGCCACGACGACGGACGACCCGCCT TGGCCTTGTCGCCGCGCCACTACGACCTGCTCCTCCGAAGAGCCGGAGACCGGAGCTGGCGACGGACGGCTGTCG AATTGGCTTCTGTCGCCCTCGCAAACGCACGTCTGCCTCGTCGCGCTCTGCATGCCGTCCATCATTGTCGCATCG TCGCCCGCTTCTCCCTCCAAGCCCCGAACTCGACTGTGGCCCGACCGGCCCAGAGACGAGCGCATCATGTCCCAC GCCCCTCCTCCCGGCCTGGTCCTCCCCTTCAGCTCCAAGGCCCATGCCCACCTGACGCCCTACCTGGCCGCCATC CACGCCTCCTGCATCACCCACGACCGCGCCATCGCCACCTTCCTGCCGCCCCTGTCGCACGAGAAGCTGCTGTCG TGGTGGAAAGAGCGCATCGCCGAGGTCAATGACGGCAAGCGGCTGATCTGGATTCTGGTGAGCGAGCTGGACGCC TCGGCCAGGCCCAGGGGTCCCGAGGTCATGGGCGTCGTCATGCTGGCCATGCCCTACTCCGAGACGGGGCCCTTC CGCGGCCTCGTCGAGAAGCTGCTGGTCCACAAGAGCTTCCGCGGCAGGGGCGGTGCCAGGGCCCTCATGGGCGCC CTCGAGAGCGACGCGGCCAAGCTGGGACGCACCGTGCTGCTGCTCGATACCGAGACGGACAGCCCTGCCGAGGCC GTCTGCAAGAAGCTAGGCTACATCGAGATGGGCAGGATTCCGAGATACGGCATGAGCCCGTCCGGCGAGCTGAAG GACGGCACCTTTCTCTACAAGCACCTCTAG |
| Transcript | >Hirsu2|8848 ATGATCCAACGCTCTCGACCGAGGCGGACGGAGCCGGCGAGCTCCCGCCTGGCCACGACGACGGACGACCCGCCT TGGCCTTGTCGCCGCGCCACTACGACCTGCTCCTCCGAAGAGCCGGAGACCGGAGCTGGCGACGGACGGCTGTCG AATTGGCTTCTGTCGCCCTCGCAAACGCACGTCTGCCTCGTCGCGCTCTGCATGCCGTCCATCATTGTCGCATCG TCGCCCGCTTCTCCCTCCAAGCCCCGAACTCGACTGTGGCCCGACCGGCCCAGAGACGAGCGCATCATGTCCCAC GCCCCTCCTCCCGGCCTGGTCCTCCCCTTCAGCTCCAAGGCCCATGCCCACCTGACGCCCTACCTGGCCGCCATC CACGCCTCCTGCATCACCCACGACCGCGCCATCGCCACCTTCCTGCCGCCCCTGTCGCACGAGAAGCTGCTGTCG TGGTGGAAAGAGCGCATCGCCGAGGTCAATGACGGCAAGCGGCTGATCTGGATTCTGGTGAGCGAGCTGGACGCC TCGGCCAGGCCCAGGGGTCCCGAGGTCATGGGCGTCGTCATGCTGGCCATGCCCTACTCCGAGACGGGGCCCTTC CGCGGCCTCGTCGAGAAGCTGCTGGTCCACAAGAGCTTCCGCGGCAGGGGCGGTGCCAGGGCCCTCATGGGCGCC CTCGAGAGCGACGCGGCCAAGCTGGGACGCACCGTGCTGCTGCTCGATACCGAGACGGACAGCCCTGCCGAGGCC GTCTGCAAGAAGCTAGGCTACATCGAGATGGGCAGGATTCCGAGATACGGCATGAGCCCGTCCGGCGAGCTGAAG GACGGCACCTTTCTCTACAAGCACCTCTAG |
| Gene | >Hirsu2|8848 ATGATCCAACGCTCTCGACCGAGGCGGACGGAGCCGGCGAGCTCCCGCCTGGCCACGACGGTCAGAGAGCCGGAG CGTGCAGGCTTGGGACCCCGTCAGCTCCTCTTCGTGCCGCCCTGAAGCGCTCGGCCATCGTCTGGACAAAGGCCC CCTCTCCCTCTTCGTCCTTCTTCCTCCTCGCAACCTCTGCAGACGGACGACCCGCCTTGGCCTTGTCGCCGCGCC ACTACGACCTGCTCCTCCGAAGAGCCGGAGACCGGAGCTGGCGACGGACGGCTGTAAGTTGCCGCCGACGTGTGA CGTCGCCTGCTAACCCGTGCCAAGGTCGAATTGGCTTCTGTCGCCCTCGCAAACGCACGTCTGCCTCGTCGCGCT CTGCATGCCGTCCATCATTGTCGCATCGTCGCCCGCTTCTCCCTCCAAGCCCCGAACTCGACTGTGGCCCGACCG GCCCAGAGACGAGCGCATCATGTCCCACGCCCCTCCTCCCGGCCTGGTCCTCCCCTTCAGCTCCAAGGCCCATGC CCACCTGACGCCCTACCTGGCCGCCATCCACGCCTCCTGCATCACCCACGACCGCGCCATCGCCACCTTCCTGCC GCCCCTGTCGCACGAGAAGCTGCTGTCGTGGTGGAAAGAGCGCATCGCCGAGGTCAATGACGGCAAGCGGCTGAT CTGGATTCTGGTGAGCGAGCTGGACGCCTCGGCCAGGCCCAGGGGTCCCGAGGTCATGGGCGTCGTCATGCTGGC CATGCCCTACTCCGAGACGGGGCCCTTCCGCGGCCTCGTCGAGAAGCTGCTGGTCCACAAGAGCTTCCGCGGCAG GGGCGGTGCCAGGGCCCTCATGGGCGCCCTCGAGAGCGACGCGGCCAAGCTGGGACGCACCGTGCTGGTACCTCG TCTCCCTTGCCCGAACCCTGCCTTGCCTCTGAACGGCCGGTCTGACCTTGGACAACGCAGCTGCTCGATACCGAG ACGGACAGCCCTGCCGAGGCCGTCTGCAAGAAGCTAGGCTACATCGAGATGGGCAGGATTCCGAGATACGGCATG AGCCCGTCCGGCGAGCTGAAGGACGGCACCTTTCTCTACAAGCACCTCTAG |