Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8836
Gene name
LocationContig_600:14438..15584
Strand+
Gene length (bp)1146
Transcript length (bp)963
Coding sequence length (bp)963
Protein length (aa) 321

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05368 NmrA NmrA-like family 6.2E-09 36 151

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 27 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8836
MMRIVVAGGGGLGCLLATQLSQAANAYSVVVLSRFARNEFNQLDVQLQVVDYNDLGRLAFALQGVDLVISTISGR
EQINLIHASVRGRVRVFVPSEFEGSLSRRPTHNDPLDRGSSQAIDLLQQYARQGRIKYTVFSCGIFMERFLPYGL
GHLNIGHGSGIVHPGEYLVDIVRATAEFVDRDSKGRTVRICMSSVYDVVRFLVAAIDLGPERWPTEFTMRGDRMS
LSELVETCSQFRNVVFRRQTLSHAEVQALLNYHIQMGQTDRVAYYQRLLATANGRYDFSRATLNEAIERSDLVDV
RAMTLVQWLMTMWQPMWQPM*
Coding >Hirsu2|8836
ATGATGCGAATCGTCGTCGCGGGCGGAGGTGGCCTCGGGTGCCTGCTGGCGACACAGCTATCGCAGGCGGCAAAC
GCCTACAGCGTCGTCGTGCTCTCGAGATTTGCTCGAAATGAATTCAACCAGCTCGACGTGCAGCTCCAGGTGGTC
GACTACAACGACCTCGGTCGCCTGGCGTTTGCGCTGCAGGGCGTCGATCTCGTCATCTCGACGATATCGGGCCGG
GAGCAGATCAACCTCATCCACGCCTCGGTGCGTGGGCGCGTGCGAGTCTTCGTGCCGTCCGAGTTCGAGGGCAGT
CTGAGCCGGCGGCCGACACACAACGACCCCCTGGACCGCGGGTCCTCCCAGGCGATCGACCTGCTGCAGCAGTAC
GCGCGGCAGGGCCGCATCAAATACACTGTCTTTTCTTGCGGCATCTTCATGGAGAGATTCCTCCCGTACGGGCTT
GGCCACCTCAACATCGGCCACGGGTCCGGCATCGTCCACCCAGGCGAATACCTCGTCGACATCGTGCGCGCGACG
GCCGAGTTTGTCGACCGAGATTCAAAAGGGCGCACGGTGCGCATCTGTATGTCGTCCGTCTACGACGTTGTCCGA
TTCCTCGTCGCGGCCATCGACCTGGGCCCTGAGAGGTGGCCGACCGAGTTCACGATGCGCGGAGACAGGATGTCC
CTCTCGGAGCTGGTGGAAACGTGTAGTCAATTCCGCAACGTGGTCTTTCGGCGGCAGACGCTGTCGCACGCAGAA
GTCCAGGCCCTCCTGAACTACCACATACAGATGGGCCAAACGGACCGGGTCGCCTACTATCAGCGGTTGCTGGCA
ACTGCAAACGGGCGATATGACTTCAGTCGTGCGACGCTGAACGAGGCCATAGAGCGGAGCGATCTCGTGGACGTG
CGGGCGATGACTCTGGTCCAGTGGCTGATGACGATGTGGCAGCCGATGTGGCAGCCGATGTGA
Transcript >Hirsu2|8836
ATGATGCGAATCGTCGTCGCGGGCGGAGGTGGCCTCGGGTGCCTGCTGGCGACACAGCTATCGCAGGCGGCAAAC
GCCTACAGCGTCGTCGTGCTCTCGAGATTTGCTCGAAATGAATTCAACCAGCTCGACGTGCAGCTCCAGGTGGTC
GACTACAACGACCTCGGTCGCCTGGCGTTTGCGCTGCAGGGCGTCGATCTCGTCATCTCGACGATATCGGGCCGG
GAGCAGATCAACCTCATCCACGCCTCGGTGCGTGGGCGCGTGCGAGTCTTCGTGCCGTCCGAGTTCGAGGGCAGT
CTGAGCCGGCGGCCGACACACAACGACCCCCTGGACCGCGGGTCCTCCCAGGCGATCGACCTGCTGCAGCAGTAC
GCGCGGCAGGGCCGCATCAAATACACTGTCTTTTCTTGCGGCATCTTCATGGAGAGATTCCTCCCGTACGGGCTT
GGCCACCTCAACATCGGCCACGGGTCCGGCATCGTCCACCCAGGCGAATACCTCGTCGACATCGTGCGCGCGACG
GCCGAGTTTGTCGACCGAGATTCAAAAGGGCGCACGGTGCGCATCTGTATGTCGTCCGTCTACGACGTTGTCCGA
TTCCTCGTCGCGGCCATCGACCTGGGCCCTGAGAGGTGGCCGACCGAGTTCACGATGCGCGGAGACAGGATGTCC
CTCTCGGAGCTGGTGGAAACGTGTAGTCAATTCCGCAACGTGGTCTTTCGGCGGCAGACGCTGTCGCACGCAGAA
GTCCAGGCCCTCCTGAACTACCACATACAGATGGGCCAAACGGACCGGGTCGCCTACTATCAGCGGTTGCTGGCA
ACTGCAAACGGGCGATATGACTTCAGTCGTGCGACGCTGAACGAGGCCATAGAGCGGAGCGATCTCGTGGACGTG
CGGGCGATGACTCTGGTCCAGTGGCTGATGACGATGTGGCAGCCGATGTGGCAGCCGATGTGA
Gene >Hirsu2|8836
ATGATGCGAATCGTCGTCGCGGGCGGAGGTGGCCTCGGGTGCCTGCTGGCGACACAGCTATCGCAGGCGGCAAAC
GCCTACAGCGTCGTCGTGCTCTCGAGATTTGTCAGGTCTCTCCGCGAGCTTCATCGACGTACGGCGGCCGTCGAC
GTGTTAACTCGTGCTCGCAGGCTCGAAATGAATTCAACCAGCTCGACGTGCAGCTCCAGGTGGTCGACTACAACG
ACCTCGGTCGCCTGGCGTTTGCGCTGCAGGGCGTCGATCTCGTCATCTCGACGATATCGGGCCGGGAGCAGATCA
ACCTCATCCACGCCTCGGTGCGTGGGCGCGTGCGAGTCTTCGTGCCGTCCGAGTTCGAGGGCAGTCTGAGCCGGC
GGCCGACACACAACGACCCCCTGGACCGCGGGTCCTCCCAGGCGATCGACCTGCTGCAGCAGTACGCGCGGCAGG
GCCGCATCAAATACACTGTCTTTTCTTGCGGCATCTTCATGGAGAGATTCCTCCCGTACGGGCTTGGCCACCTCA
ACATCGGCCACGGGTCCGGCATCGTCCACCCAGGCGAATACCTCGTCGACATCGTGCGCGCGACGGCCGAGTTTG
TCGACCGAGATTCAAAAGGGCGCACGGTGCGCATCTGTATGTCGTCCGTCTACGACGTTGTCCGATTCCTCGTCG
CGGCCATCGACCTGGGCCCTGAGAGGTGGCCGACCGAGTTCACGATGCGCGGAGACAGGATGTCCCTCTCGGAGC
TGGTGGAAACGTGTAGTCAATTCCGCAACGGTGCGAAGGCCCTCTCCTCGTCCCTCCCTATTCCGCCGTGCCTCG
CTCCATGCTCCGCTCGACGGTCCGAGTGCGCGCAACGCATGAAGAGCTGCCGGACAGCTAACAGCCTCGTCAGTG
GTCTTTCGGCGGCAGACGCTGTCGCACGCAGAAGTCCAGGCCCTCCTGAACTACCACATACAGATGGGCCAAACG
GACCGGGTCGCCTACTATCAGCGGTTGCTGGCAACTGCAAACGGGCGATATGACTTCAGTCGTGCGACGCTGAAC
GAGGCCATAGAGCGGAGCGATCTCGTGGACGTGCGGGCGATGACTCTGGTCCAGTGGCTGATGACGATGTGGCAG
CCGATGTGGCAGCCGATGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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