Protein ID | Hirsu2|8822 |
Gene name | |
Location | Contig_60:29653..31057 |
Strand | + |
Gene length (bp) | 1404 |
Transcript length (bp) | 1404 |
Coding sequence length (bp) | 1404 |
Protein length (aa) | 468 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1179 | 0.0875 | 0.9498 | 0.1242 | 0.0369 | 0.0189 | 0.2358 | 0.0875 | 0.2639 | 0.0042 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 28 | 0.999623 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 13 | 32 | 19 |
Orthofinder run ID | 4 |
Orthogroup | 842 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|8822 MARIPWAIKANVLFCAVLWFLTTSGVFATPIVRHRESPPRVLSDTHNRHGSIVKRALVKYNDFKDKRLYVALYLR SAEKPLGHEKYHWALLAAPNNARPDEKVWQAFDAANPDARKANDWELQVKPKVDPKKARSLITRIEVSALRDTIS DVDLQNTLREVPLPDSCKNPFDSCVTWALGGLKKLQDKGYIKKFDVDNFSQVAFDFANGQIDKLSQIDLDEGEAL LKQISHYDPQKGKIVPLGPKDKGPSRPNSGDDIPPDDPGSDEAEDKLRSQRARKNLREKTKSRPKKPEDSEGPPD DEGSNNDGTGSDDAGDEARVQRARNRLREKARNKPQEHNDGENPPDDEGSGNDGPGPDNDDDNDQASPQRARNRL RQKTKNKPKEQLDKQHDNDEPPKDLGPSDRNGDAERSDSASAQHARSWLRKKLYKPKTKPGRESHQSGDVPDKHR QKRPKTKSKGGKGGGRG* |
Coding | >Hirsu2|8822 ATGGCCCGAATCCCGTGGGCCATCAAGGCCAACGTGCTATTTTGCGCCGTTCTATGGTTCCTGACAACATCTGGC GTTTTTGCTACGCCTATTGTCCGCCACCGAGAATCCCCGCCTCGTGTCCTCAGCGATACGCACAATAGACATGGC AGCATCGTGAAGCGCGCGCTCGTCAAGTACAACGACTTCAAGGACAAGAGGCTATACGTCGCTCTCTACCTCCGC TCGGCCGAAAAGCCATTAGGCCATGAGAAGTATCATTGGGCCCTCTTGGCTGCGCCGAACAATGCCAGACCGGAC GAAAAGGTTTGGCAAGCCTTTGATGCCGCGAACCCGGATGCAAGGAAAGCCAACGACTGGGAGCTTCAAGTGAAA CCGAAGGTAGACCCCAAGAAAGCGAGGTCGCTCATCACTCGGATCGAGGTCAGCGCGCTGCGCGACACCATCTCA GACGTCGACCTCCAAAACACATTGCGTGAGGTGCCGTTACCGGATTCATGCAAGAACCCGTTCGATAGTTGTGTT ACGTGGGCCCTGGGCGGGCTGAAGAAGCTACAAGACAAGGGCTACATCAAGAAATTTGACGTCGACAATTTCAGC CAGGTTGCTTTCGACTTCGCCAACGGGCAAATTGACAAATTAAGCCAAATCGACCTCGACGAAGGGGAAGCTCTC CTGAAGCAAATCTCGCACTACGACCCCCAGAAAGGGAAGATCGTGCCGTTGGGCCCCAAGGACAAAGGGCCATCT CGTCCCAATAGCGGCGACGACATCCCCCCCGACGACCCAGGTTCCGACGAGGCCGAGGACAAGCTCAGAAGCCAG CGGGCGCGGAAGAATCTGCGAGAAAAAACCAAGTCCAGACCCAAGAAGCCAGAAGATAGCGAGGGCCCTCCGGAC GATGAAGGGTCTAACAACGACGGTACAGGATCCGACGACGCCGGCGACGAGGCGAGAGTGCAACGCGCTCGGAAT CGTCTGCGCGAGAAAGCCAGGAACAAGCCCCAGGAGCATAATGATGGCGAGAATCCCCCGGATGATGAAGGATCC GGCAATGACGGGCCAGGACCTGACAATGACGATGACAACGACCAGGCGAGTCCGCAGCGGGCTCGGAACCGTCTA CGCCAGAAAACCAAGAACAAGCCCAAGGAGCAGCTAGACAAGCAGCACGACAACGACGAGCCTCCCAAGGACCTT GGGCCCTCGGACAGAAACGGCGACGCAGAACGCAGCGATAGCGCAAGCGCCCAGCACGCGAGAAGCTGGTTGCGA AAGAAGCTATACAAGCCCAAGACGAAGCCGGGCCGCGAAAGCCACCAGAGCGGCGACGTCCCCGACAAGCATCGC CAGAAACGCCCCAAGACAAAGTCCAAGGGCGGGAAGGGCGGTGGCAGGGGCTGA |
Transcript | >Hirsu2|8822 ATGGCCCGAATCCCGTGGGCCATCAAGGCCAACGTGCTATTTTGCGCCGTTCTATGGTTCCTGACAACATCTGGC GTTTTTGCTACGCCTATTGTCCGCCACCGAGAATCCCCGCCTCGTGTCCTCAGCGATACGCACAATAGACATGGC AGCATCGTGAAGCGCGCGCTCGTCAAGTACAACGACTTCAAGGACAAGAGGCTATACGTCGCTCTCTACCTCCGC TCGGCCGAAAAGCCATTAGGCCATGAGAAGTATCATTGGGCCCTCTTGGCTGCGCCGAACAATGCCAGACCGGAC GAAAAGGTTTGGCAAGCCTTTGATGCCGCGAACCCGGATGCAAGGAAAGCCAACGACTGGGAGCTTCAAGTGAAA CCGAAGGTAGACCCCAAGAAAGCGAGGTCGCTCATCACTCGGATCGAGGTCAGCGCGCTGCGCGACACCATCTCA GACGTCGACCTCCAAAACACATTGCGTGAGGTGCCGTTACCGGATTCATGCAAGAACCCGTTCGATAGTTGTGTT ACGTGGGCCCTGGGCGGGCTGAAGAAGCTACAAGACAAGGGCTACATCAAGAAATTTGACGTCGACAATTTCAGC CAGGTTGCTTTCGACTTCGCCAACGGGCAAATTGACAAATTAAGCCAAATCGACCTCGACGAAGGGGAAGCTCTC CTGAAGCAAATCTCGCACTACGACCCCCAGAAAGGGAAGATCGTGCCGTTGGGCCCCAAGGACAAAGGGCCATCT CGTCCCAATAGCGGCGACGACATCCCCCCCGACGACCCAGGTTCCGACGAGGCCGAGGACAAGCTCAGAAGCCAG CGGGCGCGGAAGAATCTGCGAGAAAAAACCAAGTCCAGACCCAAGAAGCCAGAAGATAGCGAGGGCCCTCCGGAC GATGAAGGGTCTAACAACGACGGTACAGGATCCGACGACGCCGGCGACGAGGCGAGAGTGCAACGCGCTCGGAAT CGTCTGCGCGAGAAAGCCAGGAACAAGCCCCAGGAGCATAATGATGGCGAGAATCCCCCGGATGATGAAGGATCC GGCAATGACGGGCCAGGACCTGACAATGACGATGACAACGACCAGGCGAGTCCGCAGCGGGCTCGGAACCGTCTA CGCCAGAAAACCAAGAACAAGCCCAAGGAGCAGCTAGACAAGCAGCACGACAACGACGAGCCTCCCAAGGACCTT GGGCCCTCGGACAGAAACGGCGACGCAGAACGCAGCGATAGCGCAAGCGCCCAGCACGCGAGAAGCTGGTTGCGA AAGAAGCTATACAAGCCCAAGACGAAGCCGGGCCGCGAAAGCCACCAGAGCGGCGACGTCCCCGACAAGCATCGC CAGAAACGCCCCAAGACAAAGTCCAAGGGCGGGAAGGGCGGTGGCAGGGGCTGA |
Gene | >Hirsu2|8822 ATGGCCCGAATCCCGTGGGCCATCAAGGCCAACGTGCTATTTTGCGCCGTTCTATGGTTCCTGACAACATCTGGC GTTTTTGCTACGCCTATTGTCCGCCACCGAGAATCCCCGCCTCGTGTCCTCAGCGATACGCACAATAGACATGGC AGCATCGTGAAGCGCGCGCTCGTCAAGTACAACGACTTCAAGGACAAGAGGCTATACGTCGCTCTCTACCTCCGC TCGGCCGAAAAGCCATTAGGCCATGAGAAGTATCATTGGGCCCTCTTGGCTGCGCCGAACAATGCCAGACCGGAC GAAAAGGTTTGGCAAGCCTTTGATGCCGCGAACCCGGATGCAAGGAAAGCCAACGACTGGGAGCTTCAAGTGAAA CCGAAGGTAGACCCCAAGAAAGCGAGGTCGCTCATCACTCGGATCGAGGTCAGCGCGCTGCGCGACACCATCTCA GACGTCGACCTCCAAAACACATTGCGTGAGGTGCCGTTACCGGATTCATGCAAGAACCCGTTCGATAGTTGTGTT ACGTGGGCCCTGGGCGGGCTGAAGAAGCTACAAGACAAGGGCTACATCAAGAAATTTGACGTCGACAATTTCAGC CAGGTTGCTTTCGACTTCGCCAACGGGCAAATTGACAAATTAAGCCAAATCGACCTCGACGAAGGGGAAGCTCTC CTGAAGCAAATCTCGCACTACGACCCCCAGAAAGGGAAGATCGTGCCGTTGGGCCCCAAGGACAAAGGGCCATCT CGTCCCAATAGCGGCGACGACATCCCCCCCGACGACCCAGGTTCCGACGAGGCCGAGGACAAGCTCAGAAGCCAG CGGGCGCGGAAGAATCTGCGAGAAAAAACCAAGTCCAGACCCAAGAAGCCAGAAGATAGCGAGGGCCCTCCGGAC GATGAAGGGTCTAACAACGACGGTACAGGATCCGACGACGCCGGCGACGAGGCGAGAGTGCAACGCGCTCGGAAT CGTCTGCGCGAGAAAGCCAGGAACAAGCCCCAGGAGCATAATGATGGCGAGAATCCCCCGGATGATGAAGGATCC GGCAATGACGGGCCAGGACCTGACAATGACGATGACAACGACCAGGCGAGTCCGCAGCGGGCTCGGAACCGTCTA CGCCAGAAAACCAAGAACAAGCCCAAGGAGCAGCTAGACAAGCAGCACGACAACGACGAGCCTCCCAAGGACCTT GGGCCCTCGGACAGAAACGGCGACGCAGAACGCAGCGATAGCGCAAGCGCCCAGCACGCGAGAAGCTGGTTGCGA AAGAAGCTATACAAGCCCAAGACGAAGCCGGGCCGCGAAAGCCACCAGAGCGGCGACGTCCCCGACAAGCATCGC CAGAAACGCCCCAAGACAAAGTCCAAGGGCGGGAAGGGCGGTGGCAGGGGCTGA |