Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8800
Gene name
LocationContig_6:44597..45356
Strand+
Gene length (bp)759
Transcript length (bp)759
Coding sequence length (bp)759
Protein length (aa) 253

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01936 NYN NYN domain 1.1E-29 7 140
PF12872 OST-HTH OST-HTH/LOTUS domain 1.4E-13 187 234

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8800
MASPTTKLAVLVDAENASPAVAAPLLAEIAKYGTAFARRAYGDWTGTGLRGWKDQLLTLSIQPVQQFAYTQGKNA
TDSAMIIDAMDLLYSGRFDGFCLVSSDSDFTRLASRIREAGLVVYGCGERKTPRPFVAACTKFIFTENVLKPVEE
PAPAAPATDPAASVSALPKAPPPGPLHWLLAATRDTSDDDGWANLASVGGLVNKRHPEFDPRSYGFLKLSDLIIE
SKRFDIDRRIPSPGKPAVMYVREKRTC*
Coding >Hirsu2|8800
ATGGCCTCGCCGACGACCAAGCTGGCCGTCCTGGTCGACGCCGAGAATGCATCCCCCGCCGTGGCGGCCCCGCTC
CTGGCCGAGATCGCCAAGTACGGGACGGCGTTCGCCCGGCGCGCCTACGGCGACTGGACCGGCACCGGGCTCCGC
GGCTGGAAGGACCAGCTGCTGACGCTGTCGATCCAGCCGGTGCAGCAGTTCGCGTACACGCAGGGCAAGAACGCG
ACCGACTCGGCCATGATCATCGACGCCATGGACCTGCTCTACTCGGGCCGCTTCGACGGCTTCTGCCTCGTCTCG
AGCGACAGCGACTTCACCCGCCTGGCCTCGCGCATCCGCGAGGCCGGCCTCGTCGTCTACGGCTGCGGCGAGCGC
AAGACGCCCCGCCCCTTCGTCGCCGCCTGCACCAAGTTCATCTTCACGGAGAACGTGCTCAAGCCGGTCGAGGAG
CCGGCCCCCGCCGCCCCGGCGACCGACCCGGCCGCCTCCGTGTCCGCCTTGCCCAAGGCGCCCCCCCCCGGCCCT
CTGCACTGGCTGCTGGCAGCCACCCGGGACACGTCCGACGACGACGGATGGGCCAACCTCGCCAGTGTCGGCGGC
CTCGTCAACAAACGGCACCCGGAATTCGATCCGCGCTCCTACGGCTTTCTCAAGCTGAGCGACTTGATCATAGAA
TCAAAGCGTTTTGACATCGATCGACGCATTCCCTCGCCAGGAAAGCCTGCCGTGATGTACGTTCGTGAGAAGAGG
ACTTGTTGA
Transcript >Hirsu2|8800
ATGGCCTCGCCGACGACCAAGCTGGCCGTCCTGGTCGACGCCGAGAATGCATCCCCCGCCGTGGCGGCCCCGCTC
CTGGCCGAGATCGCCAAGTACGGGACGGCGTTCGCCCGGCGCGCCTACGGCGACTGGACCGGCACCGGGCTCCGC
GGCTGGAAGGACCAGCTGCTGACGCTGTCGATCCAGCCGGTGCAGCAGTTCGCGTACACGCAGGGCAAGAACGCG
ACCGACTCGGCCATGATCATCGACGCCATGGACCTGCTCTACTCGGGCCGCTTCGACGGCTTCTGCCTCGTCTCG
AGCGACAGCGACTTCACCCGCCTGGCCTCGCGCATCCGCGAGGCCGGCCTCGTCGTCTACGGCTGCGGCGAGCGC
AAGACGCCCCGCCCCTTCGTCGCCGCCTGCACCAAGTTCATCTTCACGGAGAACGTGCTCAAGCCGGTCGAGGAG
CCGGCCCCCGCCGCCCCGGCGACCGACCCGGCCGCCTCCGTGTCCGCCTTGCCCAAGGCGCCCCCCCCCGGCCCT
CTGCACTGGCTGCTGGCAGCCACCCGGGACACGTCCGACGACGACGGATGGGCCAACCTCGCCAGTGTCGGCGGC
CTCGTCAACAAACGGCACCCGGAATTCGATCCGCGCTCCTACGGCTTTCTCAAGCTGAGCGACTTGATCATAGAA
TCAAAGCGTTTTGACATCGATCGACGCATTCCCTCGCCAGGAAAGCCTGCCGTGATGTACGTTCGTGAGAAGAGG
ACTTGTTGA
Gene >Hirsu2|8800
ATGGCCTCGCCGACGACCAAGCTGGCCGTCCTGGTCGACGCCGAGAATGCATCCCCCGCCGTGGCGGCCCCGCTC
CTGGCCGAGATCGCCAAGTACGGGACGGCGTTCGCCCGGCGCGCCTACGGCGACTGGACCGGCACCGGGCTCCGC
GGCTGGAAGGACCAGCTGCTGACGCTGTCGATCCAGCCGGTGCAGCAGTTCGCGTACACGCAGGGCAAGAACGCG
ACCGACTCGGCCATGATCATCGACGCCATGGACCTGCTCTACTCGGGCCGCTTCGACGGCTTCTGCCTCGTCTCG
AGCGACAGCGACTTCACCCGCCTGGCCTCGCGCATCCGCGAGGCCGGCCTCGTCGTCTACGGCTGCGGCGAGCGC
AAGACGCCCCGCCCCTTCGTCGCCGCCTGCACCAAGTTCATCTTCACGGAGAACGTGCTCAAGCCGGTCGAGGAG
CCGGCCCCCGCCGCCCCGGCGACCGACCCGGCCGCCTCCGTGTCCGCCTTGCCCAAGGCGCCCCCCCCCGGCCCT
CTGCACTGGCTGCTGGCAGCCACCCGGGACACGTCCGACGACGACGGATGGGCCAACCTCGCCAGTGTCGGCGGC
CTCGTCAACAAACGGCACCCGGAATTCGATCCGCGCTCCTACGGCTTTCTCAAGCTGAGCGACTTGATCATAGAA
TCAAAGCGTTTTGACATCGATCGACGCATTCCCTCGCCAGGAAAGCCTGCCGTGATGTACGTTCGTGAGAAGAGG
ACTTGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail