© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|877 |
| Gene name | |
| Location | Contig_1183:5199..6704 |
| Strand | - |
| Gene length (bp) | 1505 |
| Transcript length (bp) | 1236 |
| Coding sequence length (bp) | 1236 |
| Protein length (aa) | 412 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00076 | RRM_1 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 1.5E-09 | 31 | 96 |
| PF00076 | RRM_1 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 1.1E-13 | 124 | 194 |
| PF00076 | RRM_1 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 8.1E-16 | 260 | 323 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O60176|YG41_SCHPO | Uncharacterized RNA-binding protein C23E6.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC23E6.01c PE=1 SV=2 | 28 | 380 | 1.0E-117 |
| sp|Q9FPJ8|RB45A_ARATH | Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana GN=RBP45A PE=2 SV=1 | 30 | 332 | 1.0E-81 |
| sp|Q9LEB3|RBP47_NICPL | Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia GN=RBP47 PE=1 SV=1 | 17 | 330 | 5.0E-81 |
| sp|Q9SAB3|RB45B_ARATH | Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana GN=RBP45B PE=1 SV=1 | 15 | 339 | 1.0E-79 |
| sp|Q9SX80|R47CP_ARATH | Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana GN=RBP47C' PE=2 SV=1 | 30 | 363 | 1.0E-77 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O60176|YG41_SCHPO | Uncharacterized RNA-binding protein C23E6.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC23E6.01c PE=1 SV=2 | 28 | 380 | 1.0E-117 |
| sp|Q9FPJ8|RB45A_ARATH | Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana GN=RBP45A PE=2 SV=1 | 30 | 332 | 1.0E-81 |
| sp|Q9LEB3|RBP47_NICPL | Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia GN=RBP47 PE=1 SV=1 | 17 | 330 | 5.0E-81 |
| sp|Q9SAB3|RB45B_ARATH | Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana GN=RBP45B PE=1 SV=1 | 15 | 339 | 1.0E-79 |
| sp|Q9SX80|R47CP_ARATH | Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana GN=RBP47C' PE=2 SV=1 | 30 | 363 | 1.0E-77 |
| sp|O13759|CSX1_SCHPO | RNA-binding post-transcriptional regulator csx1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=csx1 PE=1 SV=1 | 5 | 328 | 9.0E-77 |
| sp|F4I3B3|RB47A_ARATH | Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana GN=RBP47A PE=2 SV=1 | 19 | 332 | 3.0E-76 |
| sp|Q9SX79|RB47C_ARATH | Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana GN=RBP47C PE=2 SV=1 | 30 | 363 | 4.0E-76 |
| sp|Q93W34|RP45C_ARATH | Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana GN=RBP45C PE=2 SV=1 | 30 | 333 | 9.0E-74 |
| sp|Q0WW84|RB47B_ARATH | Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana GN=RBP47B PE=2 SV=1 | 30 | 332 | 1.0E-73 |
| sp|Q9LEB4|RBP45_NICPL | Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia GN=RBP45 PE=1 SV=1 | 19 | 330 | 2.0E-72 |
| sp|Q00539|NAM8_YEAST | Protein NAM8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NAM8 PE=1 SV=2 | 31 | 330 | 8.0E-71 |
| sp|Q8VXZ9|R47BP_ARATH | Polyadenylate-binding protein RBP47B' OS=Arabidopsis thaliana GN=RBP47B' PE=2 SV=1 | 19 | 330 | 8.0E-71 |
| sp|P32831|NGR1_YEAST | Negative growth regulatory protein NGR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NGR1 PE=1 SV=2 | 70 | 329 | 3.0E-59 |
| sp|Q1RMJ7|TSAP1_BOVIN | tRNA selenocysteine 1-associated protein 1 OS=Bos taurus GN=TRNAU1AP PE=2 SV=1 | 30 | 202 | 5.0E-44 |
| sp|Q9NX07|TSAP1_HUMAN | tRNA selenocysteine 1-associated protein 1 OS=Homo sapiens GN=TRNAU1AP PE=1 SV=1 | 30 | 202 | 6.0E-44 |
| sp|Q9QZI7|TSAP1_RAT | tRNA selenocysteine 1-associated protein 1 OS=Rattus norvegicus GN=Trnau1ap PE=1 SV=1 | 30 | 202 | 1.0E-43 |
| sp|Q4KM14|TSP1L_DANRE | tRNA selenocysteine 1-associated protein 1-like OS=Danio rerio GN=trnau1apl PE=2 SV=1 | 29 | 206 | 2.0E-43 |
| sp|Q80VC6|TSAP1_MOUSE | tRNA selenocysteine 1-associated protein 1 OS=Mus musculus GN=Trnau1ap PE=1 SV=2 | 30 | 202 | 3.0E-43 |
| sp|Q5R462|TSAP1_PONAB | tRNA selenocysteine 1-associated protein 1 OS=Pongo abelii GN=TRNAU1AP PE=2 SV=1 | 30 | 202 | 3.0E-43 |
| sp|O94621|US109_SCHPO | U1 snRNP-associated protein usp109 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=usp109 PE=1 SV=2 | 29 | 362 | 4.0E-37 |
| sp|Q503H1|TSAP1_DANRE | tRNA selenocysteine 1-associated protein 1 OS=Danio rerio GN=trnau1ap PE=2 SV=1 | 30 | 202 | 3.0E-31 |
| sp|Q9SYG4|UBP1A_ARATH | Oligouridylate-binding protein 1A OS=Arabidopsis thaliana GN=UBP1A PE=1 SV=1 | 30 | 328 | 3.0E-29 |
| sp|Q9LJH8|UBP1C_ARATH | Oligouridylate-binding protein 1C OS=Arabidopsis thaliana GN=UBP1C PE=1 SV=1 | 30 | 328 | 4.0E-29 |
| sp|Q9M427|UBP1_NICPL | Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia GN=UBP1 PE=2 SV=1 | 19 | 346 | 5.0E-28 |
| sp|P52912|TIA1_MOUSE | Nucleolysin TIA-1 OS=Mus musculus GN=Tia1 PE=1 SV=1 | 25 | 329 | 2.0E-27 |
| sp|Q01085|TIAR_HUMAN | Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1 | 26 | 329 | 9.0E-27 |
| sp|P31483|TIA1_HUMAN | Nucleolysin TIA-1 isoform p40 OS=Homo sapiens GN=TIA1 PE=1 SV=3 | 25 | 329 | 2.0E-26 |
| sp|Q9LQI9|UBP1B_ARATH | Oligouridylate-binding protein 1B OS=Arabidopsis thaliana GN=UBP1B PE=1 SV=1 | 16 | 328 | 5.0E-26 |
| sp|P70318|TIAR_MOUSE | Nucleolysin TIAR OS=Mus musculus GN=Tial1 PE=1 SV=1 | 26 | 329 | 6.0E-25 |
| sp|P32588|PUB1_YEAST | Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PUB1 PE=1 SV=4 | 22 | 203 | 1.0E-24 |
| sp|Q05196|PABP5_ARATH | Polyadenylate-binding protein 5 OS=Arabidopsis thaliana GN=PAB5 PE=1 SV=3 | 24 | 334 | 2.0E-19 |
| sp|O64380|PABP3_ARATH | Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3 PE=2 SV=1 | 17 | 334 | 9.0E-19 |
| sp|A5DW14|PABP_LODEL | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=PAB1 PE=3 SV=1 | 10 | 331 | 2.0E-17 |
| sp|A1CRM1|PABP_ASPCL | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=pab1 PE=3 SV=1 | 5 | 331 | 8.0E-17 |
| sp|Q15427|SF3B4_HUMAN | Splicing factor 3B subunit 4 OS=Homo sapiens GN=SF3B4 PE=1 SV=1 | 29 | 228 | 9.0E-17 |
| sp|Q6AYL5|SF3B4_RAT | Splicing factor 3B subunit 4 OS=Rattus norvegicus GN=Sf3b4 PE=2 SV=1 | 29 | 228 | 1.0E-16 |
| sp|Q8QZY9|SF3B4_MOUSE | Splicing factor 3B subunit 4 OS=Mus musculus GN=Sf3b4 PE=1 SV=1 | 29 | 228 | 1.0E-16 |
| sp|Q4WK03|PABP_ASPFU | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pab1 PE=3 SV=1 | 5 | 331 | 1.0E-16 |
| sp|Q13310|PABP4_HUMAN | Polyadenylate-binding protein 4 OS=Homo sapiens GN=PABPC4 PE=1 SV=1 | 31 | 340 | 2.0E-16 |
| sp|Q91584|ELAV3_XENLA | ELAV-like protein 3 OS=Xenopus laevis GN=elavl3 PE=2 SV=1 | 22 | 331 | 3.0E-16 |
| sp|Q28GD4|ELAV2_XENTR | ELAV-like protein 2 OS=Xenopus tropicalis GN=elavl2 PE=2 SV=2 | 9 | 331 | 3.0E-16 |
| sp|Q7JGR2|PABP5_MACMU | Polyadenylate-binding protein 5 OS=Macaca mulatta GN=PABPC5 PE=3 SV=1 | 31 | 331 | 5.0E-16 |
| sp|P60050|PABP5_PONPY | Polyadenylate-binding protein 5 OS=Pongo pygmaeus GN=PABPC5 PE=3 SV=1 | 31 | 331 | 6.0E-16 |
| sp|P60049|PABP5_PANTR | Polyadenylate-binding protein 5 OS=Pan troglodytes GN=PABPC5 PE=3 SV=1 | 31 | 331 | 6.0E-16 |
| sp|P60048|PABP5_HYLLA | Polyadenylate-binding protein 5 OS=Hylobates lar GN=PABPC5 PE=3 SV=1 | 31 | 331 | 6.0E-16 |
| sp|Q96DU9|PABP5_HUMAN | Polyadenylate-binding protein 5 OS=Homo sapiens GN=PABPC5 PE=2 SV=1 | 31 | 331 | 6.0E-16 |
| sp|P60047|PABP5_GORGO | Polyadenylate-binding protein 5 OS=Gorilla gorilla gorilla GN=PABPC5 PE=3 SV=1 | 31 | 331 | 6.0E-16 |
| sp|Q2UK72|PABP_ASPOR | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=pab1 PE=3 SV=1 | 9 | 331 | 6.0E-16 |
| sp|A1D4K4|PABP_NEOFI | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pab1 PE=3 SV=1 | 5 | 331 | 8.0E-16 |
| sp|Q7S6N6|PABP_NEUCR | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=pabp-1 PE=3 SV=1 | 26 | 315 | 1.0E-15 |
| sp|Q5R9Z6|ELAV2_PONAB | ELAV-like protein 2 OS=Pongo abelii GN=ELAVL2 PE=2 SV=1 | 8 | 327 | 2.0E-15 |
| sp|Q12926|ELAV2_HUMAN | ELAV-like protein 2 OS=Homo sapiens GN=ELAVL2 PE=1 SV=2 | 8 | 327 | 2.0E-15 |
| sp|Q60899|ELAV2_MOUSE | ELAV-like protein 2 OS=Mus musculus GN=Elavl2 PE=2 SV=1 | 8 | 327 | 3.0E-15 |
| sp|Q14576|ELAV3_HUMAN | ELAV-like protein 3 OS=Homo sapiens GN=ELAVL3 PE=2 SV=3 | 22 | 331 | 5.0E-15 |
| sp|Q6DRG1|RBM42_DANRE | RNA-binding protein 42 OS=Danio rerio GN=rbm42 PE=2 SV=2 | 103 | 205 | 5.0E-15 |
| sp|Q66KL9|RBM42_XENTR | RNA-binding protein 42 OS=Xenopus tropicalis GN=rbm42 PE=2 SV=1 | 104 | 205 | 5.0E-15 |
| sp|Q6GR16|EPABB_XENLA | Embryonic polyadenylate-binding protein B OS=Xenopus laevis GN=epabp-b PE=2 SV=1 | 31 | 338 | 5.0E-15 |
| sp|Q5B630|PABP_EMENI | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=pab1 PE=2 SV=2 | 5 | 331 | 5.0E-15 |
| sp|Q6CSV3|PABP_KLULA | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=PAB1 PE=3 SV=1 | 25 | 331 | 7.0E-15 |
| sp|Q15717|ELAV1_HUMAN | ELAV-like protein 1 OS=Homo sapiens GN=ELAVL1 PE=1 SV=2 | 28 | 327 | 8.0E-15 |
| sp|A2Q848|PABP_ASPNC | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pab1 PE=3 SV=1 | 10 | 331 | 8.0E-15 |
| sp|Q0U1G2|PABP_PHANO | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=PAB1 PE=3 SV=3 | 5 | 331 | 9.0E-15 |
| sp|Q8CH84|ELAV2_RAT | ELAV-like protein 2 OS=Rattus norvegicus GN=Elavl2 PE=1 SV=1 | 8 | 327 | 9.0E-15 |
| sp|A4QUF0|PABP_MAGO7 | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=PAB1 PE=3 SV=1 | 7 | 313 | 1.0E-14 |
| sp|Q0P5L0|RBM42_BOVIN | RNA-binding protein 42 OS=Bos taurus GN=RBM42 PE=2 SV=1 | 121 | 204 | 1.0E-14 |
| sp|Q9BTD8|RBM42_HUMAN | RNA-binding protein 42 OS=Homo sapiens GN=RBM42 PE=1 SV=1 | 121 | 204 | 1.0E-14 |
| sp|P31209|PABP_SCHPO | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pab1 PE=1 SV=2 | 7 | 331 | 1.0E-14 |
| sp|Q60900|ELAV3_MOUSE | ELAV-like protein 3 OS=Mus musculus GN=Elavl3 PE=1 SV=1 | 22 | 331 | 1.0E-14 |
| sp|P70372|ELAV1_MOUSE | ELAV-like protein 1 OS=Mus musculus GN=Elavl1 PE=1 SV=2 | 28 | 327 | 1.0E-14 |
| sp|Q91V81|RBM42_MOUSE | RNA-binding protein 42 OS=Mus musculus GN=Rbm42 PE=1 SV=1 | 121 | 204 | 1.0E-14 |
| sp|Q6AXT7|RBM42_RAT | RNA-binding protein 42 OS=Rattus norvegicus GN=Rbm42 PE=1 SV=1 | 121 | 204 | 2.0E-14 |
| sp|Q91903|ELAV2_XENLA | ELAV-like protein 2 OS=Xenopus laevis GN=elavl2 PE=1 SV=2 | 13 | 331 | 2.0E-14 |
| sp|A2VDB3|RBM42_XENLA | RNA-binding protein 42 OS=Xenopus laevis GN=rbm42 PE=2 SV=1 | 104 | 205 | 2.0E-14 |
| sp|Q28FX0|ELAV3_XENTR | ELAV-like protein 3 OS=Xenopus tropicalis GN=elavl3 PE=2 SV=1 | 22 | 331 | 2.0E-14 |
| sp|Q4VXU2|PAP1L_HUMAN | Polyadenylate-binding protein 1-like OS=Homo sapiens GN=PABPC1L PE=2 SV=1 | 31 | 386 | 2.0E-14 |
| sp|Q09442|SF3B4_CAEEL | Splicing factor 3B subunit 4 OS=Caenorhabditis elegans GN=sap-49 PE=1 SV=2 | 29 | 210 | 4.0E-14 |
| sp|Q0CR95|PABP_ASPTN | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pab1 PE=3 SV=1 | 29 | 331 | 6.0E-14 |
| sp|P04147|PABP_YEAST | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PAB1 PE=1 SV=4 | 25 | 332 | 1.0E-13 |
| sp|P29341|PABP1_MOUSE | Polyadenylate-binding protein 1 OS=Mus musculus GN=Pabpc1 PE=1 SV=2 | 27 | 333 | 1.0E-13 |
| sp|P11940|PABP1_HUMAN | Polyadenylate-binding protein 1 OS=Homo sapiens GN=PABPC1 PE=1 SV=2 | 27 | 333 | 1.0E-13 |
| sp|P61286|PABP1_BOVIN | Polyadenylate-binding protein 1 OS=Bos taurus GN=PABPC1 PE=2 SV=1 | 27 | 333 | 1.0E-13 |
| sp|Q2GSX8|PABP_CHAGB | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=PAB1 PE=3 SV=1 | 12 | 315 | 1.0E-13 |
| sp|Q86U06|RBM23_HUMAN | Probable RNA-binding protein 23 OS=Homo sapiens GN=RBM23 PE=1 SV=1 | 23 | 205 | 1.0E-13 |
| sp|Q9EPH8|PABP1_RAT | Polyadenylate-binding protein 1 OS=Rattus norvegicus GN=Pabpc1 PE=1 SV=1 | 27 | 333 | 1.0E-13 |
| sp|Q5R8F7|PABP1_PONAB | Polyadenylate-binding protein 1 OS=Pongo abelii GN=PABPC1 PE=2 SV=1 | 27 | 333 | 2.0E-13 |
| sp|P42731|PABP2_ARATH | Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1 | 4 | 341 | 3.0E-13 |
| sp|Q1DXH0|PABP_COCIM | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Coccidioides immitis (strain RS) GN=PAB1 PE=3 SV=1 | 30 | 331 | 4.0E-13 |
| sp|Q9C652|RBP1_ARATH | RNA-binding protein 1 OS=Arabidopsis thaliana GN=RBP1 PE=2 SV=1 | 122 | 376 | 5.0E-13 |
| sp|Q6DEY7|EPAB_XENTR | Embryonic polyadenylate-binding protein OS=Xenopus tropicalis GN=epabp PE=2 SV=1 | 27 | 331 | 6.0E-13 |
| sp|P21187|PABP_DROME | Polyadenylate-binding protein OS=Drosophila melanogaster GN=pAbp PE=1 SV=3 | 30 | 334 | 6.0E-13 |
| sp|Q6GR16|EPABB_XENLA | Embryonic polyadenylate-binding protein B OS=Xenopus laevis GN=epabp-b PE=2 SV=1 | 25 | 332 | 7.0E-13 |
| sp|Q5RC80|RBM39_PONAB | RNA-binding protein 39 OS=Pongo abelii GN=RBM39 PE=2 SV=1 | 23 | 203 | 8.0E-13 |
| sp|Q14498|RBM39_HUMAN | RNA-binding protein 39 OS=Homo sapiens GN=RBM39 PE=1 SV=2 | 23 | 203 | 9.0E-13 |
| sp|Q8VH51|RBM39_MOUSE | RNA-binding protein 39 OS=Mus musculus GN=Rbm39 PE=1 SV=2 | 23 | 203 | 9.0E-13 |
| sp|Q74ZS6|PABP_ASHGO | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PAB1 PE=3 SV=1 | 19 | 333 | 1.0E-12 |
| sp|Q6FKG4|PABP_CANGA | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=PAB1 PE=3 SV=1 | 25 | 331 | 1.0E-12 |
| sp|Q6CDH3|PABP_YARLI | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=PAB1 PE=3 SV=1 | 30 | 330 | 1.0E-12 |
| sp|Q5B630|PABP_EMENI | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=pab1 PE=2 SV=2 | 31 | 289 | 2.0E-12 |
| sp|Q9FXA2|PABP8_ARATH | Polyadenylate-binding protein 8 OS=Arabidopsis thaliana GN=PAB8 PE=1 SV=1 | 25 | 341 | 2.0E-12 |
| sp|Q98SP8|EPABA_XENLA | Embryonic polyadenylate-binding protein A OS=Xenopus laevis GN=epabp-a PE=1 SV=2 | 27 | 332 | 4.0E-12 |
| sp|O09032|ELAV4_RAT | ELAV-like protein 4 OS=Rattus norvegicus GN=Elavl4 PE=1 SV=1 | 21 | 327 | 4.0E-12 |
| sp|Q6IP09|PABPB_XENLA | Polyadenylate-binding protein 1-B OS=Xenopus laevis GN=pabpc1-b PE=2 SV=1 | 27 | 333 | 5.0E-12 |
| sp|P26378|ELAV4_HUMAN | ELAV-like protein 4 OS=Homo sapiens GN=ELAVL4 PE=1 SV=2 | 21 | 327 | 5.0E-12 |
| sp|Q61701|ELAV4_MOUSE | ELAV-like protein 4 OS=Mus musculus GN=Elavl4 PE=1 SV=1 | 21 | 327 | 7.0E-12 |
| sp|Q13310|PABP4_HUMAN | Polyadenylate-binding protein 4 OS=Homo sapiens GN=PABPC4 PE=1 SV=1 | 22 | 218 | 1.0E-11 |
| sp|Q5AI15|PABP_CANAL | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PAB1 PE=3 SV=1 | 30 | 331 | 1.0E-11 |
| sp|P20965|PABPA_XENLA | Polyadenylate-binding protein 1-A OS=Xenopus laevis GN=pabpc1-a PE=1 SV=3 | 27 | 315 | 1.0E-11 |
| sp|Q9LNV5|C3H4_ARATH | Zinc finger CCCH domain-containing protein 4 OS=Arabidopsis thaliana GN=At1g07360 PE=2 SV=1 | 171 | 329 | 1.0E-11 |
| sp|Q6P616|RBM22_XENTR | Pre-mRNA-splicing factor RBM22 OS=Xenopus tropicalis GN=rbm22 PE=2 SV=1 | 254 | 335 | 1.0E-11 |
| sp|A1CRM1|PABP_ASPCL | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=pab1 PE=3 SV=1 | 31 | 289 | 2.0E-11 |
| sp|Q4P8R9|PABP_USTMA | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ustilago maydis (strain 521 / FGSC 9021) GN=PAB1 PE=3 SV=1 | 29 | 334 | 2.0E-11 |
| sp|A1D4K4|PABP_NEOFI | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pab1 PE=3 SV=1 | 31 | 289 | 3.0E-11 |
| sp|P28644|ROC1_SPIOL | 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea PE=1 SV=1 | 23 | 204 | 3.0E-11 |
| sp|Q9H361|PABP3_HUMAN | Polyadenylate-binding protein 3 OS=Homo sapiens GN=PABPC3 PE=1 SV=2 | 27 | 333 | 3.0E-11 |
| sp|Q4WK03|PABP_ASPFU | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pab1 PE=3 SV=1 | 31 | 289 | 4.0E-11 |
| sp|Q13310|PABP4_HUMAN | Polyadenylate-binding protein 4 OS=Homo sapiens GN=PABPC4 PE=1 SV=1 | 27 | 333 | 4.0E-11 |
| sp|A3LXL0|PABP_PICST | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=PAB1 PE=3 SV=1 | 30 | 331 | 4.0E-11 |
| sp|Q6NZZ9|RBM22_DANRE | Pre-mRNA-splicing factor RBM22 OS=Danio rerio GN=rbm22 PE=2 SV=1 | 254 | 337 | 4.0E-11 |
| sp|Q54BM2|PAP1A_DICDI | Polyadenylate-binding protein 1-A OS=Dictyostelium discoideum GN=pabpc1A PE=1 SV=1 | 29 | 363 | 5.0E-11 |
| sp|Q3B7L8|RBM22_BOVIN | Pre-mRNA-splicing factor RBM22 OS=Bos taurus GN=RBM22 PE=2 SV=1 | 254 | 335 | 5.0E-11 |
| sp|Q5ZM16|RBM22_CHICK | Pre-mRNA-splicing factor RBM22 OS=Gallus gallus GN=RBM22 PE=2 SV=1 | 254 | 335 | 5.0E-11 |
| sp|Q4V7D7|RBM22_RAT | Pre-mRNA-splicing factor RBM22 OS=Rattus norvegicus GN=Rbm22 PE=2 SV=1 | 254 | 335 | 5.0E-11 |
| sp|Q8BHS3|RBM22_MOUSE | Pre-mRNA-splicing factor RBM22 OS=Mus musculus GN=Rbm22 PE=1 SV=1 | 254 | 335 | 7.0E-11 |
| sp|Q4R4J1|RBM22_MACFA | Pre-mRNA-splicing factor RBM22 OS=Macaca fascicularis GN=RBM22 PE=2 SV=1 | 254 | 335 | 7.0E-11 |
| sp|Q9NW64|RBM22_HUMAN | Pre-mRNA-splicing factor RBM22 OS=Homo sapiens GN=RBM22 PE=1 SV=1 | 254 | 335 | 7.0E-11 |
| sp|P16914|ELAV_DROME | Protein elav OS=Drosophila melanogaster GN=elav PE=2 SV=1 | 26 | 327 | 7.0E-11 |
| sp|Q5RAY5|RBM22_PONAB | Pre-mRNA-splicing factor RBM22 OS=Pongo abelii GN=RBM22 PE=2 SV=1 | 254 | 335 | 8.0E-11 |
| sp|A2Q848|PABP_ASPNC | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pab1 PE=3 SV=1 | 31 | 289 | 1.0E-10 |
| sp|Q0CR95|PABP_ASPTN | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pab1 PE=3 SV=1 | 31 | 289 | 1.0E-10 |
| sp|A5DM21|PABP_PICGU | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=PAB1 PE=3 SV=2 | 31 | 331 | 1.0E-10 |
| sp|Q4VXU2|PAP1L_HUMAN | Polyadenylate-binding protein 1-like OS=Homo sapiens GN=PABPC1L PE=2 SV=1 | 27 | 332 | 2.0E-10 |
| sp|O14102|SAP49_SCHPO | Spliceosome-associated protein 49 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sap49 PE=3 SV=2 | 30 | 199 | 2.0E-10 |
| sp|P27476|NSR1_YEAST | Nuclear localization sequence-binding protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NSR1 PE=1 SV=1 | 25 | 202 | 2.0E-10 |
| sp|Q7ZXB5|RBM22_XENLA | Pre-mRNA-splicing factor RBM22 OS=Xenopus laevis GN=rbm22 PE=2 SV=1 | 254 | 335 | 2.0E-10 |
| sp|Q5U259|ELV1B_XENLA | ELAV-like protein 1-B OS=Xenopus laevis GN=elavl1-b PE=1 SV=1 | 28 | 333 | 2.0E-10 |
| sp|P0CB38|PAB4L_HUMAN | Polyadenylate-binding protein 4-like OS=Homo sapiens GN=PABPC4L PE=2 SV=1 | 30 | 318 | 2.0E-10 |
| sp|Q1JQ73|ELV1A_XENLA | ELAV-like protein 1-A OS=Xenopus laevis GN=elavl1-a PE=1 SV=1 | 28 | 333 | 3.0E-10 |
| sp|Q6GLB5|ELAV1_XENTR | ELAV-like protein 1 OS=Xenopus tropicalis GN=elavl1 PE=2 SV=1 | 28 | 333 | 4.0E-10 |
| sp|P0CP46|PABP_CRYNJ | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=PAB1 PE=3 SV=1 | 35 | 245 | 5.0E-10 |
| sp|P0CP47|PABP_CRYNB | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN=PAB1 PE=3 SV=1 | 35 | 245 | 5.0E-10 |
| sp|P0CB38|PAB4L_HUMAN | Polyadenylate-binding protein 4-like OS=Homo sapiens GN=PABPC4L PE=2 SV=1 | 29 | 199 | 6.0E-10 |
| sp|A4QNI8|ELAV4_XENTR | ELAV-like protein 4 OS=Xenopus tropicalis GN=elavl4 PE=2 SV=1 | 21 | 327 | 6.0E-10 |
| sp|Q9ZW36|C3H25_ARATH | Zinc finger CCCH domain-containing protein 25 OS=Arabidopsis thaliana GN=At2g29580 PE=2 SV=1 | 171 | 331 | 7.0E-10 |
| sp|Q7SZT7|ELAV4_XENLA | ELAV-like protein 4 OS=Xenopus laevis GN=elavl4 PE=2 SV=1 | 21 | 327 | 7.0E-10 |
| sp|P41891|GAR2_SCHPO | Protein gar2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gar2 PE=1 SV=2 | 30 | 202 | 1.0E-09 |
| sp|Q5SNN4|C3H40_ORYSJ | Zinc finger CCCH domain-containing protein 40 OS=Oryza sativa subsp. japonica GN=Os06g0170500 PE=2 SV=1 | 171 | 331 | 1.0E-09 |
| sp|Q7S6N6|PABP_NEUCR | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=pabp-1 PE=3 SV=1 | 31 | 289 | 2.0E-09 |
| sp|Q4VXU2|PAP1L_HUMAN | Polyadenylate-binding protein 1-like OS=Homo sapiens GN=PABPC1L PE=2 SV=1 | 29 | 202 | 2.0E-09 |
| sp|Q2GSX8|PABP_CHAGB | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=PAB1 PE=3 SV=1 | 31 | 289 | 3.0E-09 |
| sp|O22173|PABP4_ARATH | Polyadenylate-binding protein 4 OS=Arabidopsis thaliana GN=PAB4 PE=1 SV=1 | 29 | 202 | 3.0E-09 |
| sp|P49314|ROC2_NICPL | 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1 | 121 | 326 | 3.0E-09 |
| sp|Q08937|ROC2_NICSY | 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1 | 121 | 326 | 4.0E-09 |
| sp|O04425|FCA_ARATH | Flowering time control protein FCA OS=Arabidopsis thaliana GN=FCA PE=1 SV=2 | 31 | 202 | 4.0E-09 |
| sp|P60050|PABP5_PONPY | Polyadenylate-binding protein 5 OS=Pongo pygmaeus GN=PABPC5 PE=3 SV=1 | 29 | 204 | 5.0E-09 |
| sp|P60049|PABP5_PANTR | Polyadenylate-binding protein 5 OS=Pan troglodytes GN=PABPC5 PE=3 SV=1 | 29 | 204 | 5.0E-09 |
| sp|P60048|PABP5_HYLLA | Polyadenylate-binding protein 5 OS=Hylobates lar GN=PABPC5 PE=3 SV=1 | 29 | 204 | 5.0E-09 |
| sp|Q96DU9|PABP5_HUMAN | Polyadenylate-binding protein 5 OS=Homo sapiens GN=PABPC5 PE=2 SV=1 | 29 | 204 | 5.0E-09 |
| sp|P60047|PABP5_GORGO | Polyadenylate-binding protein 5 OS=Gorilla gorilla gorilla GN=PABPC5 PE=3 SV=1 | 29 | 204 | 5.0E-09 |
| sp|Q6Z358|C3H49_ORYSJ | Zinc finger CCCH domain-containing protein 49 OS=Oryza sativa subsp. japonica GN=Os07g0281000 PE=2 SV=1 | 171 | 331 | 5.0E-09 |
| sp|Q7JGR2|PABP5_MACMU | Polyadenylate-binding protein 5 OS=Macaca mulatta GN=PABPC5 PE=3 SV=1 | 29 | 204 | 6.0E-09 |
| sp|Q5JQF8|PAP1M_HUMAN | Polyadenylate-binding protein 1-like 2 OS=Homo sapiens GN=PABPC1L2A PE=2 SV=1 | 30 | 194 | 6.0E-09 |
| sp|P11940|PABP1_HUMAN | Polyadenylate-binding protein 1 OS=Homo sapiens GN=PABPC1 PE=1 SV=2 | 29 | 202 | 7.0E-09 |
| sp|P61286|PABP1_BOVIN | Polyadenylate-binding protein 1 OS=Bos taurus GN=PABPC1 PE=2 SV=1 | 29 | 202 | 7.0E-09 |
| sp|Q5R8F7|PABP1_PONAB | Polyadenylate-binding protein 1 OS=Pongo abelii GN=PABPC1 PE=2 SV=1 | 29 | 202 | 7.0E-09 |
| sp|Q98SP8|EPABA_XENLA | Embryonic polyadenylate-binding protein A OS=Xenopus laevis GN=epabp-a PE=1 SV=2 | 29 | 202 | 8.0E-09 |
| sp|Q6Z1C0|NUCL1_ORYSJ | Nucleolin 1 OS=Oryza sativa subsp. japonica GN=Os08g0192900 PE=2 SV=1 | 7 | 202 | 8.0E-09 |
| sp|P29341|PABP1_MOUSE | Polyadenylate-binding protein 1 OS=Mus musculus GN=Pabpc1 PE=1 SV=2 | 29 | 202 | 9.0E-09 |
| sp|Q9UPN6|SCAF8_HUMAN | Protein SCAF8 OS=Homo sapiens GN=SCAF8 PE=1 SV=1 | 257 | 341 | 9.0E-09 |
| sp|Q9EPH8|PABP1_RAT | Polyadenylate-binding protein 1 OS=Rattus norvegicus GN=Pabpc1 PE=1 SV=1 | 29 | 202 | 1.0E-08 |
| sp|Q6DEY7|EPAB_XENTR | Embryonic polyadenylate-binding protein OS=Xenopus tropicalis GN=epabp PE=2 SV=1 | 29 | 202 | 1.0E-08 |
| sp|Q4P8R9|PABP_USTMA | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ustilago maydis (strain 521 / FGSC 9021) GN=PAB1 PE=3 SV=1 | 31 | 332 | 1.0E-08 |
| sp|F4HT49|PABP1_ARATH | Polyadenylate-binding protein 1 OS=Arabidopsis thaliana GN=PAB1 PE=2 SV=2 | 29 | 202 | 1.0E-08 |
| sp|Q6DID3|SCAF8_MOUSE | Protein SCAF8 OS=Mus musculus GN=Scaf8 PE=1 SV=1 | 257 | 341 | 1.0E-08 |
| sp|Q9H361|PABP3_HUMAN | Polyadenylate-binding protein 3 OS=Homo sapiens GN=PABPC3 PE=1 SV=2 | 40 | 202 | 2.0E-08 |
| sp|P19339|SXL_DROME | Protein sex-lethal OS=Drosophila melanogaster GN=Sxl PE=1 SV=1 | 103 | 313 | 2.0E-08 |
| sp|P19682|ROC3_NICSY | 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1 | 23 | 206 | 2.0E-08 |
| sp|Q10355|YDB2_SCHPO | Uncharacterized RNA-binding protein C22E12.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC22E12.02 PE=3 SV=1 | 122 | 200 | 2.0E-08 |
| sp|Q63623|SCAF8_RAT | Protein SCAF8 OS=Rattus norvegicus GN=Scaf8 PE=1 SV=1 | 257 | 341 | 2.0E-08 |
| sp|Q7JGR2|PABP5_MACMU | Polyadenylate-binding protein 5 OS=Macaca mulatta GN=PABPC5 PE=3 SV=1 | 19 | 331 | 3.0E-08 |
| sp|P60050|PABP5_PONPY | Polyadenylate-binding protein 5 OS=Pongo pygmaeus GN=PABPC5 PE=3 SV=1 | 19 | 331 | 3.0E-08 |
| sp|P60049|PABP5_PANTR | Polyadenylate-binding protein 5 OS=Pan troglodytes GN=PABPC5 PE=3 SV=1 | 19 | 331 | 3.0E-08 |
| sp|P60048|PABP5_HYLLA | Polyadenylate-binding protein 5 OS=Hylobates lar GN=PABPC5 PE=3 SV=1 | 19 | 331 | 3.0E-08 |
| sp|Q96DU9|PABP5_HUMAN | Polyadenylate-binding protein 5 OS=Homo sapiens GN=PABPC5 PE=2 SV=1 | 19 | 331 | 3.0E-08 |
| sp|P60047|PABP5_GORGO | Polyadenylate-binding protein 5 OS=Gorilla gorilla gorilla GN=PABPC5 PE=3 SV=1 | 19 | 331 | 3.0E-08 |
| sp|Q6IP09|PABPB_XENLA | Polyadenylate-binding protein 1-B OS=Xenopus laevis GN=pabpc1-b PE=2 SV=1 | 22 | 202 | 3.0E-08 |
| sp|Q24668|SXL_DROSU | Protein sex-lethal OS=Drosophila subobscura GN=Sxl PE=2 SV=2 | 116 | 313 | 4.0E-08 |
| sp|Q9P3U1|YKX5_SCHPO | Uncharacterized RNA-binding protein C328.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC328.05 PE=3 SV=3 | 49 | 328 | 5.0E-08 |
| sp|P21187|PABP_DROME | Polyadenylate-binding protein OS=Drosophila melanogaster GN=pAbp PE=1 SV=3 | 29 | 232 | 6.0E-08 |
| sp|Q54BM2|PAP1A_DICDI | Polyadenylate-binding protein 1-A OS=Dictyostelium discoideum GN=pabpc1A PE=1 SV=1 | 21 | 203 | 6.0E-08 |
| sp|O64380|PABP3_ARATH | Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3 PE=2 SV=1 | 29 | 222 | 7.0E-08 |
| sp|Q9FXA2|PABP8_ARATH | Polyadenylate-binding protein 8 OS=Arabidopsis thaliana GN=PAB8 PE=1 SV=1 | 29 | 202 | 7.0E-08 |
| sp|P20965|PABPA_XENLA | Polyadenylate-binding protein 1-A OS=Xenopus laevis GN=pabpc1-a PE=1 SV=3 | 29 | 202 | 7.0E-08 |
| sp|Q55GD6|SF3B4_DICDI | Splicing factor 3B subunit 4 OS=Dictyostelium discoideum GN=sf3b4 PE=3 SV=1 | 23 | 203 | 8.0E-08 |
| sp|Q8T6B9|PUF68_DROME | Poly(U)-binding-splicing factor half pint OS=Drosophila melanogaster GN=pUf68 PE=1 SV=2 | 124 | 330 | 8.0E-08 |
| sp|Q08937|ROC2_NICSY | 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1 | 25 | 204 | 1.0E-07 |
| sp|Q05196|PABP5_ARATH | Polyadenylate-binding protein 5 OS=Arabidopsis thaliana GN=PAB5 PE=1 SV=3 | 29 | 202 | 2.0E-07 |
| sp|P49314|ROC2_NICPL | 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1 | 25 | 204 | 2.0E-07 |
| sp|P48809|RB27C_DROME | Heterogeneous nuclear ribonucleoprotein 27C OS=Drosophila melanogaster GN=Hrb27C PE=1 SV=2 | 114 | 382 | 2.0E-07 |
| sp|O61374|SXL_CERCA | Sex-lethal homolog OS=Ceratitis capitata GN=SXL PE=2 SV=2 | 123 | 313 | 3.0E-07 |
| sp|O94432|YHKF_SCHPO | Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC660.15 PE=3 SV=1 | 49 | 235 | 3.0E-07 |
| sp|Q8RWN5|RZ1C_ARATH | Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana GN=RZ1C PE=1 SV=1 | 124 | 202 | 3.0E-07 |
| sp|Q4R4J7|NUCL_MACFA | Nucleolin OS=Macaca fascicularis GN=NCL PE=2 SV=3 | 28 | 202 | 4.0E-07 |
| sp|P19338|NUCL_HUMAN | Nucleolin OS=Homo sapiens GN=NCL PE=1 SV=3 | 30 | 202 | 4.0E-07 |
| sp|Q5RF26|NUCL_PONAB | Nucleolin OS=Pongo abelii GN=NCL PE=2 SV=3 | 30 | 202 | 4.0E-07 |
| sp|O22703|RZ1B_ARATH | Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana GN=RZ1B PE=2 SV=1 | 258 | 326 | 5.0E-07 |
| sp|Q9JII5|DAZP1_MOUSE | DAZ-associated protein 1 OS=Mus musculus GN=Dazap1 PE=1 SV=2 | 31 | 207 | 7.0E-07 |
| sp|P15771|NUCL_CHICK | Nucleolin OS=Gallus gallus GN=NCL PE=1 SV=1 | 24 | 329 | 7.0E-07 |
| sp|P08199|NUCL_MESAU | Nucleolin OS=Mesocricetus auratus GN=NCL PE=1 SV=2 | 30 | 192 | 8.0E-07 |
| sp|Q9SX79|RB47C_ARATH | Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana GN=RBP47C PE=2 SV=1 | 27 | 197 | 1.0E-06 |
| sp|P32588|PUB1_YEAST | Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PUB1 PE=1 SV=4 | 255 | 333 | 1.0E-06 |
| sp|A5DW14|PABP_LODEL | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=PAB1 PE=3 SV=1 | 29 | 249 | 1.0E-06 |
| sp|P16914|ELAV_DROME | Protein elav OS=Drosophila melanogaster GN=elav PE=2 SV=1 | 119 | 204 | 1.0E-06 |
| sp|O22703|RZ1B_ARATH | Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis thaliana GN=RZ1B PE=2 SV=1 | 111 | 202 | 1.0E-06 |
| sp|P15771|NUCL_CHICK | Nucleolin OS=Gallus gallus GN=NCL PE=1 SV=1 | 25 | 202 | 1.0E-06 |
| sp|Q9FGS0|CP31B_ARATH | RNA-binding protein CP31B, chloroplastic OS=Arabidopsis thaliana GN=CP31B PE=1 SV=1 | 21 | 204 | 1.0E-06 |
| sp|P23241|ELAV_DROVI | Protein elav OS=Drosophila virilis GN=elav PE=3 SV=1 | 119 | 204 | 1.0E-06 |
| sp|P19683|ROC4_NICSY | 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1 | 31 | 206 | 1.0E-06 |
| sp|Q4P8R9|PABP_USTMA | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ustilago maydis (strain 521 / FGSC 9021) GN=PAB1 PE=3 SV=1 | 106 | 323 | 2.0E-06 |
| sp|P19684|ROC5_NICSY | 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1 | 31 | 202 | 2.0E-06 |
| sp|P09405|NUCL_MOUSE | Nucleolin OS=Mus musculus GN=Ncl PE=1 SV=2 | 28 | 192 | 2.0E-06 |
| sp|P13383|NUCL_RAT | Nucleolin OS=Rattus norvegicus GN=Ncl PE=1 SV=3 | 30 | 202 | 2.0E-06 |
| sp|Q96EP5|DAZP1_HUMAN | DAZ-associated protein 1 OS=Homo sapiens GN=DAZAP1 PE=1 SV=1 | 31 | 203 | 2.0E-06 |
| sp|P49313|ROC1_NICPL | 30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1 | 119 | 326 | 2.0E-06 |
| sp|Q39061|CP33_ARATH | RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana GN=CP33 PE=2 SV=1 | 31 | 204 | 3.0E-06 |
| sp|Q9NEW6|RSP3_CAEEL | Probable splicing factor, arginine/serine-rich 3 OS=Caenorhabditis elegans GN=rsp-3 PE=1 SV=2 | 256 | 327 | 4.0E-06 |
| sp|Q99070|GRP2_SORBI | Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor GN=GRP2 PE=2 SV=1 | 121 | 199 | 9.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003723 | RNA binding | Yes |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0005488 | binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0003676 | nucleic acid binding | No |
| GO:0003674 | molecular_function | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | Nuclear localization signal | 0.6583 | 0.7805 | 0.0794 | 0.063 | 0.1099 | 0.0031 | 0.1747 | 0.0959 | 0.0863 | 0.0015 |
| Orthofinder run ID | 4 |
| Orthogroup | 4290 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|877 MSFPNGTPPATDMSAVAPPPGGPQEQPKTTLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSGNAGYCFV EFQTPEAATKALGLNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFPSCK SAKIMTDAMSGQSRGYGFVRFSDENDQQRALVDMQGVFCGNRPMRISTATPKNRGNHQFGGHGHHAGGPMMGAGM PQQHQMWGGMQGFPYGGYNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQF VHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNSGVGTPYRPAPPPPHYMGMPSHGPGPYGPQHFGAPAPGLQGP PGPPGPPGPAGPPQVRRAKQSEREREREGEGRAAEG* |
| Coding | >Hirsu2|877 ATGTCTTTTCCCAACGGCACCCCACCGGCCACTGACATGTCGGCTGTGGCCCCCCCTCCTGGCGGCCCCCAGGAG CAGCCGAAGACGACCCTCTGGATGGGTGAGCTGGAGCCGTGGATGGATGAGAACTTCATCAAGGGCGTCTTCCTC TCGGCTGCAGGCGAGACTGTCAATGTTAAGGTCATCCGCGACAAGAACTCTGGAAACGCCGGTTATTGTTTTGTA GAGTTTCAGACTCCCGAGGCGGCGACCAAGGCCCTCGGCCTGAACGGCACCCCGGTCCCCAACAGCTCCCGCCAG TTCAAGCTCAACTGGGCCTCGGGCGGCGGCCTCGTCGACCGACGGGATGACCGTGGACCCGAGTACAGCATTTTT GTGGGCGACCTCGGCCCCGAGGTCAACGAGTACGTGCTGGTCTCGCTGTTCCAGGCGCGCTTCCCGTCGTGCAAG TCGGCCAAGATCATGACGGACGCCATGTCGGGCCAGAGCCGGGGCTACGGCTTCGTCCGCTTCTCGGACGAAAAC GACCAGCAACGCGCCCTGGTCGACATGCAGGGCGTGTTCTGTGGTAACAGACCTATGAGGATCTCTACCGCCACT CCCAAGAACCGCGGCAACCACCAATTCGGCGGACACGGCCACCACGCCGGCGGGCCCATGATGGGCGCCGGCATG CCGCAGCAGCACCAGATGTGGGGTGGCATGCAGGGCTTCCCCTACGGCGGCTATAACCCCGCCACGCAGATGAAC CAGTTCACGGATCCCAACAACACGACCGTCTTCGTCGGCGGCCTGTCGGGCTACGTGACCGAGGACGAGCTCCGG TCCTTCTTCCAGGGCTTCGGCGAGATCACCTACGTCAAGATCCCGCCGGGCAAGGGCTGCGGCTTCGTGCAGTTC GTGCACCGCCACGCGGCCGAGATGGCCATCAACCAGATGCAGGGCTACCCCATCGGCAACTCGCGCGTCCGCCTC AGCTGGGGCCGGTCGCAGAACAACTCGGGCGTCGGCACCCCGTACCGGCCGGCCCCGCCGCCGCCGCACTACATG GGCATGCCGAGCCACGGCCCGGGCCCGTACGGCCCCCAGCACTTTGGCGCCCCGGCCCCTGGTCTCCAGGGACCG CCCGGACCGCCCGGCCCTCCCGGCCCCGCCGGGCCCCCTCAGGTAAGGCGTGCGAAACAGAGCGAGAGAGAGAGA GAGAGAGAGGGAGAGGGACGCGCAGCAGAGGGGTGA |
| Transcript | >Hirsu2|877 ATGTCTTTTCCCAACGGCACCCCACCGGCCACTGACATGTCGGCTGTGGCCCCCCCTCCTGGCGGCCCCCAGGAG CAGCCGAAGACGACCCTCTGGATGGGTGAGCTGGAGCCGTGGATGGATGAGAACTTCATCAAGGGCGTCTTCCTC TCGGCTGCAGGCGAGACTGTCAATGTTAAGGTCATCCGCGACAAGAACTCTGGAAACGCCGGTTATTGTTTTGTA GAGTTTCAGACTCCCGAGGCGGCGACCAAGGCCCTCGGCCTGAACGGCACCCCGGTCCCCAACAGCTCCCGCCAG TTCAAGCTCAACTGGGCCTCGGGCGGCGGCCTCGTCGACCGACGGGATGACCGTGGACCCGAGTACAGCATTTTT GTGGGCGACCTCGGCCCCGAGGTCAACGAGTACGTGCTGGTCTCGCTGTTCCAGGCGCGCTTCCCGTCGTGCAAG TCGGCCAAGATCATGACGGACGCCATGTCGGGCCAGAGCCGGGGCTACGGCTTCGTCCGCTTCTCGGACGAAAAC GACCAGCAACGCGCCCTGGTCGACATGCAGGGCGTGTTCTGTGGTAACAGACCTATGAGGATCTCTACCGCCACT CCCAAGAACCGCGGCAACCACCAATTCGGCGGACACGGCCACCACGCCGGCGGGCCCATGATGGGCGCCGGCATG CCGCAGCAGCACCAGATGTGGGGTGGCATGCAGGGCTTCCCCTACGGCGGCTATAACCCCGCCACGCAGATGAAC CAGTTCACGGATCCCAACAACACGACCGTCTTCGTCGGCGGCCTGTCGGGCTACGTGACCGAGGACGAGCTCCGG TCCTTCTTCCAGGGCTTCGGCGAGATCACCTACGTCAAGATCCCGCCGGGCAAGGGCTGCGGCTTCGTGCAGTTC GTGCACCGCCACGCGGCCGAGATGGCCATCAACCAGATGCAGGGCTACCCCATCGGCAACTCGCGCGTCCGCCTC AGCTGGGGCCGGTCGCAGAACAACTCGGGCGTCGGCACCCCGTACCGGCCGGCCCCGCCGCCGCCGCACTACATG GGCATGCCGAGCCACGGCCCGGGCCCGTACGGCCCCCAGCACTTTGGCGCCCCGGCCCCTGGTCTCCAGGGACCG CCCGGACCGCCCGGCCCTCCCGGCCCCGCCGGGCCCCCTCAGGTAAGGCGTGCGAAACAGAGCGAGAGAGAGAGA GAGAGAGAGGGAGAGGGACGCGCAGCAGAGGGGTGA |
| Gene | >Hirsu2|877 ATGTCTTTTCCCAACGGCACCCCACCGGCCACTGACATGTCGGCTGTGGCCCCCCCTCCTGGCGGCCCCCAGGAG CAGCCGAAGACGACCCTCTGGTGAGCAACCTCTGCGACGGACCGCACGGCCGAATGCTGAGCAGAAGCGTCAGGA TGGGTGAGCTGGAGCCGTGGATGGATGAGAACTTCATCAAGGGCGTCTTCCTCTCGGCTGCAGGCGAGACTGTCA ATGTTAAGGTCATCCGCGACAAGAACTCTGGGTAGGTCCAAGCCCGGTGGTCGTCGGACGCTGCGAGCGCCCGTC CGTCGCGGGAGACGGCTGACGGGTGGCGCAGAAACGCCGGTTATTGTTTTGTAGAGTTTCAGACTCCCGAGGCGG CGACCAAGGCCCTCGGCCTGAACGGCACCCCGGTCCCCAACAGCTCCCGCCAGTTCAAGCTCAACTGGGCCTCGG GCGGCGGCCTCGTCGACCGACGGTAAGCCTTGTCTGGCTGGCGGCTGCCCTGATCGTGTCGGCGACAGTGCTGAC GGCGTGCTTTCCGTCGCAGGGATGACCGTGGACCCGAGTACAGCATTTTTGTGGGCGACCTCGGCCCCGAGGTCA ACGAGTACGTGCTGGTCTCGCTGTTCCAGGCGCGCTTCCCGTCGTGCAAGTCGGCCAAGATCATGACGGACGCCA TGTCGGGCCAGAGCCGGGGCTACGGCTTCGTCCGCTTCTCGGACGAAAACGACCAGCAACGCGCCCTGGTCGACA TGCAGGGCGTGTTCTGTGGTAACAGACCTATGAGGATCTCTACCGCCACTCCCAAGAACCGGTATGCGACGTCGA ACCACCCCGGCCCGTCAGCCGCGGACGGGCGGACGGCTAACGGCGAGGTGTCCAGCGGCAACCACCAATTCGGCG GACACGGCCACCACGCCGGCGGGCCCATGATGGGCGCCGGCATGCCGCAGCAGCACCAGATGTGGGGTGGCATGC AGGGCTTCCCCTACGGCGGCTATAACCCCGCCACGCAGATGAACCAGTTCACGGATCCCAACAACACGACCGTCT TCGTCGGCGGCCTGTCGGGCTACGTGACCGAGGACGAGCTCCGGTCCTTCTTCCAGGGCTTCGGCGAGATCACCT ACGTCAAGATCCCGCCGGGCAAGGGCTGCGGCTTCGTGCAGTTCGTGCACCGCCACGCGGCCGAGATGGCCATCA ACCAGATGCAGGGCTACCCCATCGGCAACTCGCGCGTCCGCCTCAGCTGGGGCCGGTCGCAGAACAACTCGGGCG TCGGCACCCCGTACCGGCCGGCCCCGCCGCCGCCGCACTACATGGGCATGCCGAGCCACGGCCCGGGCCCGTACG GCCCCCAGCACTTTGGCGCCCCGGCCCCTGGTCTCCAGGGACCGCCCGGACCGCCCGGCCCTCCCGGCCCCGCCG GGCCCCCTCAGGTAAGGCGTGCGAAACAGAGCGAGAGAGAGAGAGAGAGAGAGGGAGAGGGACGCGCAGCAGAGG GGTGA |