Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8769
Gene name
LocationContig_596:1414..3236
Strand-
Gene length (bp)1822
Transcript length (bp)1563
Coding sequence length (bp)1563
Protein length (aa) 521

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05224 NDT80_PhoG NDT80 / PhoG like DNA-binding family 1.5E-35 149 310

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q05534|PHOG_EMENI Protein pacG OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=pacG PE=3 SV=3 29 520 8.0E-86
sp|Q9C2N1|VIB1_NEUCR Transcription factor vib-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=vib-1 PE=3 SV=1 97 342 4.0E-48

GO

GO Term Description Terminal node
GO:0003677 DNA binding Yes
GO:1901363 heterocyclic compound binding No
GO:0097159 organic cyclic compound binding No
GO:0003676 nucleic acid binding No
GO:0003674 molecular_function No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 25 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8769
MATFNSMPAMTAAAASDHMAIANGTQPVAMDHFDQGLNFDESLLDGGALAPLPFTPAYDFDNFATTFEDPFCYSS
RAFEPTPNPDALNEASSPQELDNKLLGFSDPIRSFNVLDETGSIAELHLSAELYGMFFVAEDVFGGENTGRPLEL
TCYRRNLWQCSGQITLPRAVSHLMDEQGRQFPIFELAASITALESIEGKATEIISIPWKSSNPQANEENKVACAP
PQIPLDLGTAQELDATRVSLPVSWKRLQFKHATANNGRRKGLQQHYVVQINLLGKAKSGDMVKIAEIQSGPVIVR
GRSPRNFDSRRDVHLTGEKRLERKGTVNAENVAVKPDRDNPPTSIQRFPTPGNASTPSAEWTGHQPAPPQTSLSP
RPSKRMAASPHITKPPVPAWTADAGAAPRTTPTSGQPHRGQNSRHNSAMPINLSLSEDEKSPNRSSAELQSPQFG
KVLPAMCQNAANSPAEDPDPLYEYFPLTVDDWMPPVDAVYRPHVVHHTIVPPEIKAQQVRSKAKRYFAAE*
Coding >Hirsu2|8769
ATGGCCACGTTCAACTCGATGCCGGCCATGACAGCCGCTGCCGCCAGTGACCACATGGCCATCGCCAACGGCACC
CAGCCCGTGGCCATGGACCATTTCGATCAGGGCCTCAACTTCGACGAGTCGCTTCTCGACGGCGGCGCCCTCGCC
CCTCTCCCCTTCACGCCCGCCTATGACTTTGACAACTTCGCCACCACATTCGAAGACCCCTTCTGCTACTCCTCC
CGCGCCTTCGAGCCGACGCCGAACCCGGACGCCCTCAACGAGGCCTCGTCCCCGCAGGAGCTCGACAACAAGCTC
CTCGGCTTCTCAGACCCCATCCGCAGCTTCAACGTCCTCGACGAGACGGGCAGCATCGCCGAGCTGCACCTGAGC
GCCGAGCTGTACGGCATGTTCTTCGTGGCCGAGGACGTCTTCGGCGGCGAGAACACGGGCCGGCCGCTCGAGCTG
ACCTGCTACCGCCGCAACCTCTGGCAGTGCTCGGGCCAGATCACCCTGCCCCGCGCCGTCTCCCACCTCATGGAC
GAGCAGGGGCGCCAGTTTCCCATCTTCGAGCTGGCCGCCTCCATCACCGCGCTCGAGTCCATCGAGGGCAAGGCG
ACCGAGATCATCTCGATCCCCTGGAAGAGCTCCAACCCGCAAGCCAACGAGGAGAACAAGGTGGCCTGCGCGCCG
CCCCAGATCCCGCTGGACCTCGGCACCGCCCAGGAGCTGGACGCCACCCGCGTCTCTCTGCCCGTCTCCTGGAAG
CGGCTGCAGTTCAAGCACGCCACCGCTAACAACGGCCGGAGAAAGGGCCTGCAGCAGCACTACGTCGTCCAGATC
AACCTTCTCGGCAAGGCCAAATCCGGCGACATGGTCAAGATTGCCGAGATCCAGTCGGGGCCGGTCATCGTGCGA
GGGCGCAGTCCTCGCAACTTTGACAGCCGGAGGGACGTCCACCTGACGGGCGAGAAGAGGCTGGAGCGGAAAGGC
ACGGTCAACGCGGAGAACGTGGCCGTCAAGCCGGATCGCGACAACCCGCCAACCTCGATACAGCGGTTTCCCACC
CCGGGGAACGCATCGACACCGTCCGCCGAGTGGACAGGCCACCAGCCAGCGCCGCCGCAGACGAGCCTAAGTCCT
CGCCCGTCCAAGAGAATGGCCGCGTCGCCGCACATCACGAAGCCGCCGGTCCCTGCCTGGACGGCGGATGCCGGC
GCGGCCCCGAGGACGACGCCGACGTCCGGACAGCCTCACCGCGGCCAAAACAGCCGACACAACTCGGCCATGCCC
ATCAACCTCTCGCTGTCGGAGGACGAGAAGAGCCCGAATCGGTCAAGCGCGGAGCTGCAGAGCCCGCAGTTCGGA
AAGGTGTTACCGGCCATGTGCCAAAATGCTGCAAACAGCCCCGCCGAGGATCCTGATCCGCTGTACGAATACTTT
CCCTTGACGGTCGATGACTGGATGCCTCCTGTAGATGCTGTCTACAGACCGCACGTTGTCCACCACACCATTGTG
CCACCCGAGATCAAGGCGCAACAGGTCCGGAGTAAGGCGAAGCGGTATTTCGCGGCCGAGTAG
Transcript >Hirsu2|8769
ATGGCCACGTTCAACTCGATGCCGGCCATGACAGCCGCTGCCGCCAGTGACCACATGGCCATCGCCAACGGCACC
CAGCCCGTGGCCATGGACCATTTCGATCAGGGCCTCAACTTCGACGAGTCGCTTCTCGACGGCGGCGCCCTCGCC
CCTCTCCCCTTCACGCCCGCCTATGACTTTGACAACTTCGCCACCACATTCGAAGACCCCTTCTGCTACTCCTCC
CGCGCCTTCGAGCCGACGCCGAACCCGGACGCCCTCAACGAGGCCTCGTCCCCGCAGGAGCTCGACAACAAGCTC
CTCGGCTTCTCAGACCCCATCCGCAGCTTCAACGTCCTCGACGAGACGGGCAGCATCGCCGAGCTGCACCTGAGC
GCCGAGCTGTACGGCATGTTCTTCGTGGCCGAGGACGTCTTCGGCGGCGAGAACACGGGCCGGCCGCTCGAGCTG
ACCTGCTACCGCCGCAACCTCTGGCAGTGCTCGGGCCAGATCACCCTGCCCCGCGCCGTCTCCCACCTCATGGAC
GAGCAGGGGCGCCAGTTTCCCATCTTCGAGCTGGCCGCCTCCATCACCGCGCTCGAGTCCATCGAGGGCAAGGCG
ACCGAGATCATCTCGATCCCCTGGAAGAGCTCCAACCCGCAAGCCAACGAGGAGAACAAGGTGGCCTGCGCGCCG
CCCCAGATCCCGCTGGACCTCGGCACCGCCCAGGAGCTGGACGCCACCCGCGTCTCTCTGCCCGTCTCCTGGAAG
CGGCTGCAGTTCAAGCACGCCACCGCTAACAACGGCCGGAGAAAGGGCCTGCAGCAGCACTACGTCGTCCAGATC
AACCTTCTCGGCAAGGCCAAATCCGGCGACATGGTCAAGATTGCCGAGATCCAGTCGGGGCCGGTCATCGTGCGA
GGGCGCAGTCCTCGCAACTTTGACAGCCGGAGGGACGTCCACCTGACGGGCGAGAAGAGGCTGGAGCGGAAAGGC
ACGGTCAACGCGGAGAACGTGGCCGTCAAGCCGGATCGCGACAACCCGCCAACCTCGATACAGCGGTTTCCCACC
CCGGGGAACGCATCGACACCGTCCGCCGAGTGGACAGGCCACCAGCCAGCGCCGCCGCAGACGAGCCTAAGTCCT
CGCCCGTCCAAGAGAATGGCCGCGTCGCCGCACATCACGAAGCCGCCGGTCCCTGCCTGGACGGCGGATGCCGGC
GCGGCCCCGAGGACGACGCCGACGTCCGGACAGCCTCACCGCGGCCAAAACAGCCGACACAACTCGGCCATGCCC
ATCAACCTCTCGCTGTCGGAGGACGAGAAGAGCCCGAATCGGTCAAGCGCGGAGCTGCAGAGCCCGCAGTTCGGA
AAGGTGTTACCGGCCATGTGCCAAAATGCTGCAAACAGCCCCGCCGAGGATCCTGATCCGCTGTACGAATACTTT
CCCTTGACGGTCGATGACTGGATGCCTCCTGTAGATGCTGTCTACAGACCGCACGTTGTCCACCACACCATTGTG
CCACCCGAGATCAAGGCGCAACAGGTCCGGAGTAAGGCGAAGCGGTATTTCGCGGCCGAGTAG
Gene >Hirsu2|8769
ATGGCCACGTTCAACTCGATGCCGGCCATGACAGCCGCTGCCGCCAGTGACCACATGGCCATCGCCAACGGCACC
CAGCCCGTGGCCATGGACCATTTCGATCAGGGCCTCAACTTCGACGAGTCGCTTCTGTGAGTGAGAGCCCCTGCC
CCGCCTCTTCTCCCTCGCCCCCTGACCTTGGCCTCCGACCGTCGGCGGCCTGCACCGTGCACCGCGCTGACCGTG
ATACTCCTCGCCCGGCAGCGACGGCGGCGCCCTCGCCCCTCTCCCCTTCACGCCCGCCTATGACTTTGACAACTT
CGCCACCACATTCGAAGACCCCTTCTGCTACTCCTCCCGCGCCTTCGAGCCGACGCCGAACCCGGACGCCCTCAA
CGAGGCCTCGTCCCCGCAGGAGCTCGACAACAAGCTCCTCGGCTTCTCAGACCCCATCCGCAGCTTCAACGTCCT
CGACGAGACGGGCAGCATCGCCGAGCTGCACCTGAGCGCCGAGCTGTACGGCATGTTCTTCGTGGCCGAGGACGT
CTTCGGCGGCGAGAACACGGGCCGGCCGCTCGAGCTGACCTGCTACCGCCGCAACCTCTGGCAGTGCTCGGGCCA
GATCACCCTGCCCCGCGCCGTCTCCCACCTCATGGACGAGCAGGGGCGCCAGTTTCCCATCTTCGAGCTGGCCGC
CTCCATCACCGCGCTCGAGTCCATCGAGGGCAAGGCGACCGAGATCATCTCGATCCCCTGGAAGAGCTCCAACCC
GCAAGCCAACGAGGAGAACAAGGTGGCCTGCGCGCCGCCCCAGATCCCGCTGGACCTCGGCACCGCCCAGGAGCT
GGACGCCACCCGCGTCTCTCTGCCCGTCTCCTGGAAGCGGCTGCAGTTCAAGCACGCCACCGCTAACAACGGCCG
GAGAAAGGGCCTGCAGCAGCACTACGTCGTCCAGATCAACCTTCTCGGCAAGGCCAAATCCGGCGACATGGTCAA
GATTGCCGAGATCCAGTCGGGGCCGGTCATCGTGCGAGGGCGCAGTCCTCGCAACTTTGACAGCCGGAGGGACGT
CCACCTGACGGGCGAGAAGAGGCTGGAGCGGAAAGGCACGGTCAACGCGGAGAACGTGGCCGTCAAGCCGGATCG
CGACAACCCGCCAACCTCGATACAGCGGTTTCCCACCCCGGGGAACGCATCGGTATGTTTTTTTTTTTGAAGCTG
CCGCGCCGGCTCAGCCGCAGAACTGACGAGTGACTGACCGGGACGCAAGACACCGTCCGCCGAGTGGACAGGCCA
CCAGCCAGCGCCGCCGCAGACGAGCCTAAGTCCTCGCCCGTCCAAGAGAATGGCCGCGTCGCCGCACATCACGAA
GCCGCCGGTCCCTGCCTGGACGGCGGATGCCGGCGCGGCCCCGAGGACGACGCCGACGTCCGGACAGCCTCACCG
CGGCCAAAACAGCCGACACAACTCGGCCATGCCCATCAACCTCTCGCTGTCGGAGGACGAGAAGAGCCCGAATCG
GTCAAGCGCGGAGCTGCAGAGCCCGCAGTTCGGAAAGGTGTTACCGGCCATGTGCCAAAATGCTGCAAACAGCCC
CGCCGAGGATCCTGATCCGCTGTACGAATACTTTCCCTTGACGGTCGATGACTGGTACGTGCCATCTCAAACACC
TTCGGCCTTGTAAGGCTGCCCGTGTACTGACTCGGACTTCCCCCCCCTCGCCAGGATGCCTCCTGTAGATGCTGT
CTACAGACCGCACGTTGTCCACCACACCATTGTGCCACCCGAGATCAAGGCGCAACAGGTCCGGAGTAAGGCGAA
GCGGTATTTCGCGGCCGAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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