Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8747
Gene name
LocationContig_591:5434..7143
Strand-
Gene length (bp)1709
Transcript length (bp)1575
Coding sequence length (bp)1575
Protein length (aa) 525

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01169 UPF0016 Uncharacterized protein family UPF0016 5.0E-20 263 336
PF01169 UPF0016 Uncharacterized protein family UPF0016 1.2E-19 441 514

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P38301|GDT1_YEAST GCR1-dependent translation factor 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GDT1 PE=1 SV=1 260 522 3.0E-60
sp|Q9HC07|TM165_HUMAN Transmembrane protein 165 OS=Homo sapiens GN=TMEM165 PE=1 SV=1 259 515 3.0E-52
sp|Q10320|YD68_SCHPO GDT1-like protein C17G8.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17G8.08c PE=3 SV=1 260 522 3.0E-51
sp|Q4V899|TM165_RAT Transmembrane protein 165 OS=Rattus norvegicus GN=Tmem165 PE=2 SV=1 211 515 2.0E-49
sp|P52875|TM165_MOUSE Transmembrane protein 165 OS=Mus musculus GN=Tmem165 PE=1 SV=2 211 515 2.0E-49
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Swissprot ID Swissprot Description Start End E-value
sp|P38301|GDT1_YEAST GCR1-dependent translation factor 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GDT1 PE=1 SV=1 260 522 3.0E-60
sp|Q9HC07|TM165_HUMAN Transmembrane protein 165 OS=Homo sapiens GN=TMEM165 PE=1 SV=1 259 515 3.0E-52
sp|Q10320|YD68_SCHPO GDT1-like protein C17G8.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17G8.08c PE=3 SV=1 260 522 3.0E-51
sp|Q4V899|TM165_RAT Transmembrane protein 165 OS=Rattus norvegicus GN=Tmem165 PE=2 SV=1 211 515 2.0E-49
sp|P52875|TM165_MOUSE Transmembrane protein 165 OS=Mus musculus GN=Tmem165 PE=1 SV=2 211 515 2.0E-49
sp|Q9P7Q0|YLY5_SCHPO GDT1-like protein C186.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC186.05c PE=3 SV=1 263 522 1.0E-38
sp|Q2R4J1|GDT13_ORYSJ GDT1-like protein 3 OS=Oryza sativa subsp. japonica GN=Os11g0472500 PE=2 SV=1 258 514 9.0E-37
sp|A2ZE50|GDT13_ORYSI GDT1-like protein 3 OS=Oryza sativa subsp. indica GN=OsI_36063 PE=3 SV=1 258 514 9.0E-37
sp|B9G125|GDT15_ORYSJ GDT1-like protein 5 OS=Oryza sativa subsp. japonica GN=Os08g0433100 PE=2 SV=1 261 519 4.0E-32
sp|Q9C6M1|GDT14_ARATH GDT1-like protein 4 OS=Arabidopsis thaliana GN=At1g25520 PE=2 SV=1 259 524 1.0E-31
sp|Q6ZIB9|GDT14_ORYSJ GDT1-like protein 4 OS=Oryza sativa subsp. japonica GN=Os08g0528500 PE=2 SV=1 227 514 3.0E-31
sp|A2YXC7|GDT14_ORYSI GDT1-like protein 4 OS=Oryza sativa subsp. indica GN=OsI_29993 PE=3 SV=1 227 514 3.0E-31
sp|Q9SX28|GDT15_ARATH GDT1-like protein 5 OS=Arabidopsis thaliana GN=At1g68650 PE=1 SV=1 259 513 8.0E-30
sp|Q9T0H9|GDT12_ARATH GDT1-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=At4g13590 PE=1 SV=2 261 514 1.0E-23
sp|P52876|Y615_SYNY3 GDT1-like protein sll0615 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0615 PE=3 SV=1 440 516 4.0E-19
sp|Q93Y38|GDT13_ARATH GDT1-like protein 3 OS=Arabidopsis thaliana GN=At5g36290 PE=2 SV=1 430 514 4.0E-17
sp|Q93Y38|GDT13_ARATH GDT1-like protein 3 OS=Arabidopsis thaliana GN=At5g36290 PE=2 SV=1 248 340 2.0E-15
sp|Q5NAY7|GDT11_ORYSJ GDT1-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0221700 PE=3 SV=2 230 524 2.0E-15
sp|B8AAM2|GDT11_ORYSI GDT1-like protein 1, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_00941 PE=3 SV=2 230 524 5.0E-15
sp|Q94AX5|GDT11_ARATH GDT1-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=At1g64150 PE=2 SV=2 261 514 1.0E-14
sp|P52876|Y615_SYNY3 GDT1-like protein sll0615 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0615 PE=3 SV=1 260 376 9.0E-14
sp|Q2R2Z4|GDT12_ORYSJ GDT1-like protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0544500 PE=2 SV=1 441 518 2.0E-12
sp|Q2R2Z4|GDT12_ORYSJ GDT1-like protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0544500 PE=2 SV=1 261 368 2.0E-09
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GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum Signal peptide|Transmembrane domain 0.1217 0.0736 0.271 0.3271 0.3862 0.0377 0.5258 0.5012 0.4331 0.0619

SignalP

SignalP signal predicted Location Score
Yes 1 - 20 0.852844

Transmembrane Domains

Domain # Start End Length
1 291 313 22
2 323 340 17
3 426 448 22
4 468 490 22
5 497 519 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup4280
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3656
Ophiocordyceps australis map64 (Brazil) OphauB2|314
Ophiocordyceps camponoti-floridani Ophcf2|06256
Ophiocordyceps camponoti-rufipedis Ophun1|6269
Ophiocordyceps kimflemingae Ophio5|3255
Ophiocordyceps subramaniannii Hirsu2|8747 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8747
MKLRARRSALPLLLLLPSLAATVAPDKVDDAVASASGNVKARHDRPTEAAPVDGKDGKPHSGPFVETKRSAADSN
RPGLPRLKDRPEDPTVVDGKKIPEWNDSVMFDKNRERPQEGTTGTEGGVTEKAKARKAMEGETGEKVLTQPKSPK
EQPPLPHSEEQKLQTDDGKDKDGKVKSKQLSEKDKIRLKAWSDKDEDNTDYTGLDKPGDLPEAPHDKTNPLPKSA
VKDHLQTSKSAPGSSQTGSKDGLDNDDGIIRPFHSFVLSLTMILVSEVGDKTFLVAALMAMKHDRLVVFSAAFGA
LLVMTVLSAVLGHAVPTLIPKRLTSFLAAGLFLVFGIKLLREGMKMDPEEGVSAEMHEVEQELAEKEKEQGHLGR
GSISAQSLEMGLKGRASRSKGRFPSPARSPSRSPSRSPSRGSRSADNFIHGISNLCSLLLSPAWVQTFAMTFLGE
WGDRSQIATIAMAAGQDYWWVTLGAMCGHAVCTGVAVVGGRAIAGRVSLKVVTVGGAIAFLLFAFIYFVEALHA*
Coding >Hirsu2|8747
ATGAAGCTTCGCGCTCGGCGCTCAGCTCTCCCGCTGCTGCTCCTTCTGCCTTCGCTCGCCGCCACTGTCGCACCT
GACAAGGTCGACGACGCCGTTGCCAGCGCTTCTGGGAACGTCAAAGCCCGGCATGACCGGCCCACCGAGGCCGCA
CCCGTGGATGGAAAGGACGGCAAGCCTCACAGTGGCCCCTTCGTCGAGACCAAGCGCAGCGCGGCCGACTCGAAC
CGCCCGGGGCTGCCTCGCCTCAAAGACCGGCCCGAGGACCCAACTGTGGTGGACGGCAAGAAGATACCGGAATGG
AACGACAGCGTCATGTTCGACAAGAACCGCGAACGACCGCAAGAGGGCACCACCGGTACCGAGGGCGGTGTGACG
GAGAAAGCCAAGGCTCGCAAGGCCATGGAGGGCGAGACGGGTGAAAAAGTTCTTACCCAACCTAAGTCGCCCAAG
GAGCAGCCTCCTCTACCGCACAGCGAAGAGCAGAAGCTACAGACGGACGACGGCAAGGACAAGGACGGCAAGGTC
AAGTCAAAACAGTTGTCGGAAAAGGACAAGATTCGGTTGAAAGCATGGTCCGACAAGGATGAAGACAACACCGAT
TACACGGGGCTTGATAAACCAGGCGATCTGCCAGAGGCCCCGCACGACAAGACCAACCCTCTCCCCAAATCGGCG
GTCAAGGACCACCTCCAGACGTCCAAGTCTGCACCGGGTTCTTCGCAGACGGGGAGCAAGGACGGCCTCGACAAC
GACGACGGCATCATCCGACCCTTCCACTCGTTCGTTCTCTCCTTGACCATGATTCTGGTGTCGGAAGTGGGCGAT
AAGACCTTCCTCGTGGCGGCTCTCATGGCGATGAAGCACGATCGGCTGGTTGTCTTCTCGGCAGCCTTCGGGGCG
CTCCTCGTCATGACTGTCCTATCTGCCGTGCTCGGGCACGCCGTGCCGACCCTGATACCGAAGCGTCTGACAAGC
TTCCTGGCCGCCGGCCTGTTCCTCGTCTTCGGAATCAAGCTCCTGCGCGAGGGCATGAAGATGGATCCGGAAGAA
GGAGTGTCGGCCGAGATGCACGAGGTCGAGCAGGAACTGGCGGAGAAGGAAAAGGAGCAGGGCCATCTCGGCCGC
GGCTCCATCTCGGCACAGTCGCTGGAGATGGGGCTCAAGGGCAGGGCCTCGCGGTCCAAGGGCCGATTCCCATCA
CCGGCTCGATCGCCGTCGCGATCTCCGTCCCGGAGCCCGTCGCGTGGATCCAGGTCGGCCGACAACTTCATACAC
GGCATCAGCAACCTCTGCTCGTTGCTCCTGAGCCCGGCTTGGGTGCAGACGTTTGCCATGACGTTTCTGGGGGAA
TGGGGCGACCGCAGCCAGATCGCGACGATTGCCATGGCTGCCGGTCAAGACTACTGGTGGGTGACTCTGGGAGCC
ATGTGCGGCCACGCCGTGTGCACAGGCGTCGCCGTCGTCGGCGGCCGGGCCATTGCCGGGCGTGTCAGCCTCAAA
GTCGTCACGGTCGGCGGTGCGATTGCGTTCCTGCTGTTCGCCTTCATCTACTTTGTCGAGGCTCTGCATGCGTAG
Transcript >Hirsu2|8747
ATGAAGCTTCGCGCTCGGCGCTCAGCTCTCCCGCTGCTGCTCCTTCTGCCTTCGCTCGCCGCCACTGTCGCACCT
GACAAGGTCGACGACGCCGTTGCCAGCGCTTCTGGGAACGTCAAAGCCCGGCATGACCGGCCCACCGAGGCCGCA
CCCGTGGATGGAAAGGACGGCAAGCCTCACAGTGGCCCCTTCGTCGAGACCAAGCGCAGCGCGGCCGACTCGAAC
CGCCCGGGGCTGCCTCGCCTCAAAGACCGGCCCGAGGACCCAACTGTGGTGGACGGCAAGAAGATACCGGAATGG
AACGACAGCGTCATGTTCGACAAGAACCGCGAACGACCGCAAGAGGGCACCACCGGTACCGAGGGCGGTGTGACG
GAGAAAGCCAAGGCTCGCAAGGCCATGGAGGGCGAGACGGGTGAAAAAGTTCTTACCCAACCTAAGTCGCCCAAG
GAGCAGCCTCCTCTACCGCACAGCGAAGAGCAGAAGCTACAGACGGACGACGGCAAGGACAAGGACGGCAAGGTC
AAGTCAAAACAGTTGTCGGAAAAGGACAAGATTCGGTTGAAAGCATGGTCCGACAAGGATGAAGACAACACCGAT
TACACGGGGCTTGATAAACCAGGCGATCTGCCAGAGGCCCCGCACGACAAGACCAACCCTCTCCCCAAATCGGCG
GTCAAGGACCACCTCCAGACGTCCAAGTCTGCACCGGGTTCTTCGCAGACGGGGAGCAAGGACGGCCTCGACAAC
GACGACGGCATCATCCGACCCTTCCACTCGTTCGTTCTCTCCTTGACCATGATTCTGGTGTCGGAAGTGGGCGAT
AAGACCTTCCTCGTGGCGGCTCTCATGGCGATGAAGCACGATCGGCTGGTTGTCTTCTCGGCAGCCTTCGGGGCG
CTCCTCGTCATGACTGTCCTATCTGCCGTGCTCGGGCACGCCGTGCCGACCCTGATACCGAAGCGTCTGACAAGC
TTCCTGGCCGCCGGCCTGTTCCTCGTCTTCGGAATCAAGCTCCTGCGCGAGGGCATGAAGATGGATCCGGAAGAA
GGAGTGTCGGCCGAGATGCACGAGGTCGAGCAGGAACTGGCGGAGAAGGAAAAGGAGCAGGGCCATCTCGGCCGC
GGCTCCATCTCGGCACAGTCGCTGGAGATGGGGCTCAAGGGCAGGGCCTCGCGGTCCAAGGGCCGATTCCCATCA
CCGGCTCGATCGCCGTCGCGATCTCCGTCCCGGAGCCCGTCGCGTGGATCCAGGTCGGCCGACAACTTCATACAC
GGCATCAGCAACCTCTGCTCGTTGCTCCTGAGCCCGGCTTGGGTGCAGACGTTTGCCATGACGTTTCTGGGGGAA
TGGGGCGACCGCAGCCAGATCGCGACGATTGCCATGGCTGCCGGTCAAGACTACTGGTGGGTGACTCTGGGAGCC
ATGTGCGGCCACGCCGTGTGCACAGGCGTCGCCGTCGTCGGCGGCCGGGCCATTGCCGGGCGTGTCAGCCTCAAA
GTCGTCACGGTCGGCGGTGCGATTGCGTTCCTGCTGTTCGCCTTCATCTACTTTGTCGAGGCTCTGCATGCGTAG
Gene >Hirsu2|8747
ATGAAGCTTCGCGCTCGGCGCTCAGCTCTCCCGCTGCTGCTCCTTCTGCCTTCGCTCGCCGCCACTGTCGCACCT
GACAAGGTCGACGACGCCGTTGCCAGCGCTTCTGGGAACGTCAAAGCCCGGCATGACCGGCCCACCGAGGCCGCA
CCCGTGGATGGAAAGGACGGCAAGCCTCACAGTGGCCCCTTCGTCGAGACCAAGCGCAGCGCGGCCGACTCGAAC
CGCCCGGGGCTGCCTCGCCTCAAAGACCGGCCCGAGGACCCAACTGTGGTGGACGGCAAGAAGATACCGGAATGG
AACGACAGCGTCATGTTCGACAAGAACCGCGAACGACCGCAAGAGGGCACCACCGGTACCGAGGGCGGTGTGACG
GAGAAAGCCAAGGCTCGCAAGGCCATGGAGGGCGAGACGGGTGAAAAAGTTCTTACCCAACCTAAGTCGCCCAAG
GAGCAGCCTCCTCTACCGCACAGCGAAGAGCAGAAGCTACAGACGGACGACGGCAAGGACAAGGACGGCAAGGTC
AAGTCAAAACAGTTGTCGGAAAAGGACAAGATTCGGTTGAAAGCATGGTCCGACAAGGATGAAGACAACACCGAT
TACACGGGGCTTGATGTAAGACACCCTCACCCCATCTTGATGGCGTGGCGGCCCAGGCACTTGGGTACGACTGAC
GGGACCTATTGTACAGAAACCAGGCGATCTGCCAGAGGCCCCGCACGACAAGACCAACCCTCTCCCCAAATCGGC
GGTCAAGGACCACCTCCAGACGTCCAAGTCTGCACCGGGTTCTTCGCAGACGGGGAGCAAGGACGGCCTCGACAA
CGACGACGGCATCATCCGACCCTTCCACTCGTTCGTTCTCTCCTTGACCATGATTCTGGTGTCGGAAGTGGGCGA
TAAGACCTTCCTCGTGGCGGCTCTCATGGCGATGAAGCACGATCGGCTGGTTGTCTTCTCGGCAGCCTTCGGGGC
GCTCCTCGTCATGACTGTCCTATCTGCCGTGCTCGGGCACGCCGTGCCGACCCTGATACCGAAGCGTCTGACAAG
CTTCCTGGCCGCCGGCCTGTTCCTCGTCTTCGGAATCAAGCTCCTGCGCGAGGGCATGAAGATGGATCCGGAAGA
AGGAGTGTCGGCCGAGATGCACGAGGTCGAGCAGGAACTGGCGGAGAAGGAAAAGGAGCAGGGCCATCTCGGCCG
CGGCTCCATCTCGGCACAGTCGCTGGAGATGGGGCTCAAGGGCAGGGCCTCGCGGTCCAAGGGCCGATTCCCATC
ACCGGCTCGATCGCCGTCGCGATCTCCGTCCCGGAGCCCGTCGCGTGGATCCAGGTCGGCCGACAACTTCATACA
CGGCATCAGCAACCTCTGCTCGTTGCTCCTGAGCCCGGCTTGGGTGCAGACGTTTGCCATGACGTTTCTGGGGGA
ATGGGGCGACCGCAGCCAGATCGCGACGATTGCCATGGCTGCCGGTCAAGACTACTGGTGGGTGACTCTGGGAGC
CATGTGCGGCCACGCCGTGTGCACAGGCGTCGCCGTCGTCGGCGGCCGGGCCATTGCCGGGCGTGTCAGCCTCAA
AGTCGGTGAGTGGAAGGACGGGCTTGTGTGTTGGGGATCACGGAAAGCTAACCGGATGCTCAGTCACGGTCGGCG
GTGCGATTGCGTTCCTGCTGTTCGCCTTCATCTACTTTGTCGAGGCTCTGCATGCGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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