Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8747
Gene name
LocationContig_591:5434..7143
Strand-
Gene length (bp)1709
Transcript length (bp)1575
Coding sequence length (bp)1575
Protein length (aa) 525

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01169 UPF0016 Uncharacterized protein family UPF0016 4.4E-20 263 336
PF01169 UPF0016 Uncharacterized protein family UPF0016 1.1E-19 440 514

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P38301|GDT1_YEAST GCR1-dependent translation factor 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GDT1 PE=1 SV=1 260 522 3.0E-60
sp|Q9HC07|TM165_HUMAN Transmembrane protein 165 OS=Homo sapiens GN=TMEM165 PE=1 SV=1 259 515 3.0E-52
sp|Q10320|YD68_SCHPO GDT1-like protein C17G8.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17G8.08c PE=3 SV=1 260 522 3.0E-51
sp|Q4V899|TM165_RAT Transmembrane protein 165 OS=Rattus norvegicus GN=Tmem165 PE=2 SV=1 211 515 2.0E-49
sp|P52875|TM165_MOUSE Transmembrane protein 165 OS=Mus musculus GN=Tmem165 PE=1 SV=2 211 515 2.0E-49
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Swissprot ID Swissprot Description Start End E-value
sp|P38301|GDT1_YEAST GCR1-dependent translation factor 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GDT1 PE=1 SV=1 260 522 3.0E-60
sp|Q9HC07|TM165_HUMAN Transmembrane protein 165 OS=Homo sapiens GN=TMEM165 PE=1 SV=1 259 515 3.0E-52
sp|Q10320|YD68_SCHPO GDT1-like protein C17G8.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17G8.08c PE=3 SV=1 260 522 3.0E-51
sp|Q4V899|TM165_RAT Transmembrane protein 165 OS=Rattus norvegicus GN=Tmem165 PE=2 SV=1 211 515 2.0E-49
sp|P52875|TM165_MOUSE Transmembrane protein 165 OS=Mus musculus GN=Tmem165 PE=1 SV=2 211 515 2.0E-49
sp|Q9P7Q0|YLY5_SCHPO GDT1-like protein C186.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC186.05c PE=3 SV=1 263 522 1.0E-38
sp|Q2R4J1|GDT13_ORYSJ GDT1-like protein 3 OS=Oryza sativa subsp. japonica GN=Os11g0472500 PE=2 SV=1 258 514 9.0E-37
sp|A2ZE50|GDT13_ORYSI GDT1-like protein 3 OS=Oryza sativa subsp. indica GN=OsI_36063 PE=3 SV=1 258 514 9.0E-37
sp|B9G125|GDT15_ORYSJ GDT1-like protein 5 OS=Oryza sativa subsp. japonica GN=Os08g0433100 PE=2 SV=1 261 519 4.0E-32
sp|Q9C6M1|GDT14_ARATH GDT1-like protein 4 OS=Arabidopsis thaliana GN=At1g25520 PE=2 SV=1 259 524 1.0E-31
sp|A2YXC7|GDT14_ORYSI GDT1-like protein 4 OS=Oryza sativa subsp. indica GN=OsI_29993 PE=3 SV=1 227 514 3.0E-31
sp|Q6ZIB9|GDT14_ORYSJ GDT1-like protein 4 OS=Oryza sativa subsp. japonica GN=Os08g0528500 PE=2 SV=1 227 514 3.0E-31
sp|Q9SX28|GDT15_ARATH GDT1-like protein 5 OS=Arabidopsis thaliana GN=At1g68650 PE=1 SV=1 259 513 8.0E-30
sp|Q9T0H9|GDT12_ARATH GDT1-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=At4g13590 PE=1 SV=2 261 514 1.0E-23
sp|P52876|Y615_SYNY3 GDT1-like protein sll0615 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0615 PE=3 SV=1 440 516 4.0E-19
sp|Q93Y38|GDT13_ARATH GDT1-like protein 3 OS=Arabidopsis thaliana GN=At5g36290 PE=2 SV=1 430 514 4.0E-17
sp|Q93Y38|GDT13_ARATH GDT1-like protein 3 OS=Arabidopsis thaliana GN=At5g36290 PE=2 SV=1 248 340 2.0E-15
sp|Q5NAY7|GDT11_ORYSJ GDT1-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0221700 PE=3 SV=2 230 524 2.0E-15
sp|B8AAM2|GDT11_ORYSI GDT1-like protein 1, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_00941 PE=3 SV=2 230 524 5.0E-15
sp|Q94AX5|GDT11_ARATH GDT1-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=At1g64150 PE=2 SV=2 261 514 1.0E-14
sp|P52876|Y615_SYNY3 GDT1-like protein sll0615 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0615 PE=3 SV=1 260 376 9.0E-14
sp|Q2R2Z4|GDT12_ORYSJ GDT1-like protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0544500 PE=2 SV=1 441 518 2.0E-12
sp|Q2R2Z4|GDT12_ORYSJ GDT1-like protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0544500 PE=2 SV=1 261 368 2.0E-09
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 26 0.45

Transmembrane Domains

Domain # Start End Length
1 291 313 22
2 323 340 17
3 426 448 22
4 468 490 22
5 497 519 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8747
MKLRARRSALPLLLLLPSLAATVAPDKVDDAVASASGNVKARHDRPTEAAPVDGKDGKPHSGPFVETKRSAADSN
RPGLPRLKDRPEDPTVVDGKKIPEWNDSVMFDKNRERPQEGTTGTEGGVTEKAKARKAMEGETGEKVLTQPKSPK
EQPPLPHSEEQKLQTDDGKDKDGKVKSKQLSEKDKIRLKAWSDKDEDNTDYTGLDKPGDLPEAPHDKTNPLPKSA
VKDHLQTSKSAPGSSQTGSKDGLDNDDGIIRPFHSFVLSLTMILVSEVGDKTFLVAALMAMKHDRLVVFSAAFGA
LLVMTVLSAVLGHAVPTLIPKRLTSFLAAGLFLVFGIKLLREGMKMDPEEGVSAEMHEVEQELAEKEKEQGHLGR
GSISAQSLEMGLKGRASRSKGRFPSPARSPSRSPSRSPSRGSRSADNFIHGISNLCSLLLSPAWVQTFAMTFLGE
WGDRSQIATIAMAAGQDYWWVTLGAMCGHAVCTGVAVVGGRAIAGRVSLKVVTVGGAIAFLLFAFIYFVEALHA*
Coding >Hirsu2|8747
ATGAAGCTTCGCGCTCGGCGCTCAGCTCTCCCGCTGCTGCTCCTTCTGCCTTCGCTCGCCGCCACTGTCGCACCT
GACAAGGTCGACGACGCCGTTGCCAGCGCTTCTGGGAACGTCAAAGCCCGGCATGACCGGCCCACCGAGGCCGCA
CCCGTGGATGGAAAGGACGGCAAGCCTCACAGTGGCCCCTTCGTCGAGACCAAGCGCAGCGCGGCCGACTCGAAC
CGCCCGGGGCTGCCTCGCCTCAAAGACCGGCCCGAGGACCCAACTGTGGTGGACGGCAAGAAGATACCGGAATGG
AACGACAGCGTCATGTTCGACAAGAACCGCGAACGACCGCAAGAGGGCACCACCGGTACCGAGGGCGGTGTGACG
GAGAAAGCCAAGGCTCGCAAGGCCATGGAGGGCGAGACGGGTGAAAAAGTTCTTACCCAACCTAAGTCGCCCAAG
GAGCAGCCTCCTCTACCGCACAGCGAAGAGCAGAAGCTACAGACGGACGACGGCAAGGACAAGGACGGCAAGGTC
AAGTCAAAACAGTTGTCGGAAAAGGACAAGATTCGGTTGAAAGCATGGTCCGACAAGGATGAAGACAACACCGAT
TACACGGGGCTTGATAAACCAGGCGATCTGCCAGAGGCCCCGCACGACAAGACCAACCCTCTCCCCAAATCGGCG
GTCAAGGACCACCTCCAGACGTCCAAGTCTGCACCGGGTTCTTCGCAGACGGGGAGCAAGGACGGCCTCGACAAC
GACGACGGCATCATCCGACCCTTCCACTCGTTCGTTCTCTCCTTGACCATGATTCTGGTGTCGGAAGTGGGCGAT
AAGACCTTCCTCGTGGCGGCTCTCATGGCGATGAAGCACGATCGGCTGGTTGTCTTCTCGGCAGCCTTCGGGGCG
CTCCTCGTCATGACTGTCCTATCTGCCGTGCTCGGGCACGCCGTGCCGACCCTGATACCGAAGCGTCTGACAAGC
TTCCTGGCCGCCGGCCTGTTCCTCGTCTTCGGAATCAAGCTCCTGCGCGAGGGCATGAAGATGGATCCGGAAGAA
GGAGTGTCGGCCGAGATGCACGAGGTCGAGCAGGAACTGGCGGAGAAGGAAAAGGAGCAGGGCCATCTCGGCCGC
GGCTCCATCTCGGCACAGTCGCTGGAGATGGGGCTCAAGGGCAGGGCCTCGCGGTCCAAGGGCCGATTCCCATCA
CCGGCTCGATCGCCGTCGCGATCTCCGTCCCGGAGCCCGTCGCGTGGATCCAGGTCGGCCGACAACTTCATACAC
GGCATCAGCAACCTCTGCTCGTTGCTCCTGAGCCCGGCTTGGGTGCAGACGTTTGCCATGACGTTTCTGGGGGAA
TGGGGCGACCGCAGCCAGATCGCGACGATTGCCATGGCTGCCGGTCAAGACTACTGGTGGGTGACTCTGGGAGCC
ATGTGCGGCCACGCCGTGTGCACAGGCGTCGCCGTCGTCGGCGGCCGGGCCATTGCCGGGCGTGTCAGCCTCAAA
GTCGTCACGGTCGGCGGTGCGATTGCGTTCCTGCTGTTCGCCTTCATCTACTTTGTCGAGGCTCTGCATGCGTAG
Transcript >Hirsu2|8747
ATGAAGCTTCGCGCTCGGCGCTCAGCTCTCCCGCTGCTGCTCCTTCTGCCTTCGCTCGCCGCCACTGTCGCACCT
GACAAGGTCGACGACGCCGTTGCCAGCGCTTCTGGGAACGTCAAAGCCCGGCATGACCGGCCCACCGAGGCCGCA
CCCGTGGATGGAAAGGACGGCAAGCCTCACAGTGGCCCCTTCGTCGAGACCAAGCGCAGCGCGGCCGACTCGAAC
CGCCCGGGGCTGCCTCGCCTCAAAGACCGGCCCGAGGACCCAACTGTGGTGGACGGCAAGAAGATACCGGAATGG
AACGACAGCGTCATGTTCGACAAGAACCGCGAACGACCGCAAGAGGGCACCACCGGTACCGAGGGCGGTGTGACG
GAGAAAGCCAAGGCTCGCAAGGCCATGGAGGGCGAGACGGGTGAAAAAGTTCTTACCCAACCTAAGTCGCCCAAG
GAGCAGCCTCCTCTACCGCACAGCGAAGAGCAGAAGCTACAGACGGACGACGGCAAGGACAAGGACGGCAAGGTC
AAGTCAAAACAGTTGTCGGAAAAGGACAAGATTCGGTTGAAAGCATGGTCCGACAAGGATGAAGACAACACCGAT
TACACGGGGCTTGATAAACCAGGCGATCTGCCAGAGGCCCCGCACGACAAGACCAACCCTCTCCCCAAATCGGCG
GTCAAGGACCACCTCCAGACGTCCAAGTCTGCACCGGGTTCTTCGCAGACGGGGAGCAAGGACGGCCTCGACAAC
GACGACGGCATCATCCGACCCTTCCACTCGTTCGTTCTCTCCTTGACCATGATTCTGGTGTCGGAAGTGGGCGAT
AAGACCTTCCTCGTGGCGGCTCTCATGGCGATGAAGCACGATCGGCTGGTTGTCTTCTCGGCAGCCTTCGGGGCG
CTCCTCGTCATGACTGTCCTATCTGCCGTGCTCGGGCACGCCGTGCCGACCCTGATACCGAAGCGTCTGACAAGC
TTCCTGGCCGCCGGCCTGTTCCTCGTCTTCGGAATCAAGCTCCTGCGCGAGGGCATGAAGATGGATCCGGAAGAA
GGAGTGTCGGCCGAGATGCACGAGGTCGAGCAGGAACTGGCGGAGAAGGAAAAGGAGCAGGGCCATCTCGGCCGC
GGCTCCATCTCGGCACAGTCGCTGGAGATGGGGCTCAAGGGCAGGGCCTCGCGGTCCAAGGGCCGATTCCCATCA
CCGGCTCGATCGCCGTCGCGATCTCCGTCCCGGAGCCCGTCGCGTGGATCCAGGTCGGCCGACAACTTCATACAC
GGCATCAGCAACCTCTGCTCGTTGCTCCTGAGCCCGGCTTGGGTGCAGACGTTTGCCATGACGTTTCTGGGGGAA
TGGGGCGACCGCAGCCAGATCGCGACGATTGCCATGGCTGCCGGTCAAGACTACTGGTGGGTGACTCTGGGAGCC
ATGTGCGGCCACGCCGTGTGCACAGGCGTCGCCGTCGTCGGCGGCCGGGCCATTGCCGGGCGTGTCAGCCTCAAA
GTCGTCACGGTCGGCGGTGCGATTGCGTTCCTGCTGTTCGCCTTCATCTACTTTGTCGAGGCTCTGCATGCGTAG
Gene >Hirsu2|8747
ATGAAGCTTCGCGCTCGGCGCTCAGCTCTCCCGCTGCTGCTCCTTCTGCCTTCGCTCGCCGCCACTGTCGCACCT
GACAAGGTCGACGACGCCGTTGCCAGCGCTTCTGGGAACGTCAAAGCCCGGCATGACCGGCCCACCGAGGCCGCA
CCCGTGGATGGAAAGGACGGCAAGCCTCACAGTGGCCCCTTCGTCGAGACCAAGCGCAGCGCGGCCGACTCGAAC
CGCCCGGGGCTGCCTCGCCTCAAAGACCGGCCCGAGGACCCAACTGTGGTGGACGGCAAGAAGATACCGGAATGG
AACGACAGCGTCATGTTCGACAAGAACCGCGAACGACCGCAAGAGGGCACCACCGGTACCGAGGGCGGTGTGACG
GAGAAAGCCAAGGCTCGCAAGGCCATGGAGGGCGAGACGGGTGAAAAAGTTCTTACCCAACCTAAGTCGCCCAAG
GAGCAGCCTCCTCTACCGCACAGCGAAGAGCAGAAGCTACAGACGGACGACGGCAAGGACAAGGACGGCAAGGTC
AAGTCAAAACAGTTGTCGGAAAAGGACAAGATTCGGTTGAAAGCATGGTCCGACAAGGATGAAGACAACACCGAT
TACACGGGGCTTGATGTAAGACACCCTCACCCCATCTTGATGGCGTGGCGGCCCAGGCACTTGGGTACGACTGAC
GGGACCTATTGTACAGAAACCAGGCGATCTGCCAGAGGCCCCGCACGACAAGACCAACCCTCTCCCCAAATCGGC
GGTCAAGGACCACCTCCAGACGTCCAAGTCTGCACCGGGTTCTTCGCAGACGGGGAGCAAGGACGGCCTCGACAA
CGACGACGGCATCATCCGACCCTTCCACTCGTTCGTTCTCTCCTTGACCATGATTCTGGTGTCGGAAGTGGGCGA
TAAGACCTTCCTCGTGGCGGCTCTCATGGCGATGAAGCACGATCGGCTGGTTGTCTTCTCGGCAGCCTTCGGGGC
GCTCCTCGTCATGACTGTCCTATCTGCCGTGCTCGGGCACGCCGTGCCGACCCTGATACCGAAGCGTCTGACAAG
CTTCCTGGCCGCCGGCCTGTTCCTCGTCTTCGGAATCAAGCTCCTGCGCGAGGGCATGAAGATGGATCCGGAAGA
AGGAGTGTCGGCCGAGATGCACGAGGTCGAGCAGGAACTGGCGGAGAAGGAAAAGGAGCAGGGCCATCTCGGCCG
CGGCTCCATCTCGGCACAGTCGCTGGAGATGGGGCTCAAGGGCAGGGCCTCGCGGTCCAAGGGCCGATTCCCATC
ACCGGCTCGATCGCCGTCGCGATCTCCGTCCCGGAGCCCGTCGCGTGGATCCAGGTCGGCCGACAACTTCATACA
CGGCATCAGCAACCTCTGCTCGTTGCTCCTGAGCCCGGCTTGGGTGCAGACGTTTGCCATGACGTTTCTGGGGGA
ATGGGGCGACCGCAGCCAGATCGCGACGATTGCCATGGCTGCCGGTCAAGACTACTGGTGGGTGACTCTGGGAGC
CATGTGCGGCCACGCCGTGTGCACAGGCGTCGCCGTCGTCGGCGGCCGGGCCATTGCCGGGCGTGTCAGCCTCAA
AGTCGGTGAGTGGAAGGACGGGCTTGTGTGTTGGGGATCACGGAAAGCTAACCGGATGCTCAGTCACGGTCGGCG
GTGCGATTGCGTTCCTGCTGTTCGCCTTCATCTACTTTGTCGAGGCTCTGCATGCGTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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