Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|872
Gene name
LocationContig_1182:2920..4836
Strand+
Gene length (bp)1916
Transcript length (bp)1767
Coding sequence length (bp)1767
Protein length (aa) 589

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13520 AA_permease_2 Amino acid permease 1.8E-55 54 513
PF00324 AA_permease Amino acid permease 1.7E-22 64 511

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P19807|HNM1_YEAST Choline transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HNM1 PE=1 SV=1 17 537 9.0E-59
sp|O74537|YCQ4_SCHPO Uncharacterized amino-acid permease C74.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC74.04 PE=3 SV=1 9 564 5.0E-46
sp|O60113|YG64_SCHPO Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=3 SV=1 7 531 3.0E-44
sp|O59942|AAP2_NEUCR Amino-acid permease 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=aap-2 PE=2 SV=2 39 545 1.0E-40
sp|Q9ZU50|BAT1_ARATH Amino-acid permease BAT1 OS=Arabidopsis thaliana GN=BAT1 PE=2 SV=2 41 527 5.0E-40
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Swissprot ID Swissprot Description Start End E-value
sp|P19807|HNM1_YEAST Choline transport protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HNM1 PE=1 SV=1 17 537 9.0E-59
sp|O74537|YCQ4_SCHPO Uncharacterized amino-acid permease C74.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC74.04 PE=3 SV=1 9 564 5.0E-46
sp|O60113|YG64_SCHPO Uncharacterized amino-acid permease C15C4.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15C4.04c PE=3 SV=1 7 531 3.0E-44
sp|O59942|AAP2_NEUCR Amino-acid permease 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=aap-2 PE=2 SV=2 39 545 1.0E-40
sp|Q9ZU50|BAT1_ARATH Amino-acid permease BAT1 OS=Arabidopsis thaliana GN=BAT1 PE=2 SV=2 41 527 5.0E-40
sp|Q9US40|YFZ1_SCHPO Uncharacterized amino-acid permease C1039.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.01 PE=3 SV=1 6 530 3.0E-39
sp|Q09887|YC9D_SCHPO Uncharacterized amino-acid permease C584.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC584.13 PE=3 SV=1 18 530 4.0E-38
sp|Q10087|YAO8_SCHPO Uncharacterized amino-acid permease C11D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.08c PE=3 SV=1 12 545 4.0E-36
sp|B9EXZ6|BAT1_ORYSJ Amino-acid permease BAT1 homolog OS=Oryza sativa subsp. japonica GN=BAT1 PE=2 SV=1 41 506 2.0E-35
sp|Q9C0Z0|YKM2_SCHPO Uncharacterized amino-acid permease PB24D3.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.02c PE=3 SV=1 2 571 1.0E-32
sp|P32837|UGA4_YEAST GABA-specific permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UGA4 PE=1 SV=1 36 544 2.0E-32
sp|P36029|TPO5_YEAST Polyamine transporter TPO5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPO5 PE=1 SV=1 13 530 7.0E-29
sp|O74248|GPT1_CANAX Putative polyamine transporter OS=Candida albicans GN=GPT1 PE=3 SV=1 37 521 7.0E-28
sp|P53744|BIO5_YEAST 7-keto 8-aminopelargonic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BIO5 PE=1 SV=1 22 517 3.0E-24
sp|Q9UT18|THI9_SCHPO Thiamine transporter thi9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=thi9 PE=1 SV=1 7 519 1.0E-22
sp|O59813|YCT3_SCHPO Uncharacterized amino-acid permease C794.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC794.03 PE=2 SV=1 21 522 3.0E-21
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GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0016020 membrane Yes
GO:0051234 establishment of localization No
GO:0003674 molecular_function No
GO:0051179 localization No
GO:0005575 cellular_component No
GO:0005215 transporter activity No
GO:0008150 biological_process No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 65 0.5

Transmembrane Domains

Domain # Start End Length
1 56 78 22
2 88 110 22
3 149 171 22
4 186 208 22
5 220 242 22
6 306 328 22
7 354 376 22
8 406 428 22
9 435 457 22
10 472 494 22
11 507 524 17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|872
MTAGTERERAEADDDDDDDTDDKQQQQDKTTRTARRDAEDLAALGHAEALTRKFSTWSMLALAFTVLGTWSTCAQ
GLSNGLVNGGPVSILWGLALVAVCNTCVALSLGELCSSMPTALGQAYWISRLGRASPAARFASYLCAWINTFGWW
TLGASQIAFMADFLLAMRLIFLDDEAAAAARAAWPGWLRLLVYLAITLLFTLFNLVACRRAAVLPAFNNFVGVGF
VALFVAFALALPIAVAARRPALHFQRASFVFAAWLNRTGWPDAVTWFLGLVQGAYGLTAFDSVIHMVEEIPAPRR
NAPRTMSLAVVCGALSGFLFMLVCLFCIQDVDRLLAAPSGFPFIDITQSTVGRYGAAVLIALFILNGLGQGVSVM
TSASRLTWSFARDGGLPCGAYFARVDPVWHVPARALWLQAAITALVGLLYLFASSVLQAILSVSTIALTISYAMP
IAALLLAGRRRMPAPDFSLGRFGPAVNLVSLAYCAVTTVFFFFPSRPAPSPADMNYAIAVFGVMLVVALAFWALQ
GRLTFMHGAQEALAAADDDVLWAQDVAAAAHDHDAQRPRAAHDGSQGLADEAKGDMVKHPTGD*
Coding >Hirsu2|872
ATGACGGCGGGGACGGAGAGGGAGAGGGCGGAGGCGGACGACGACGACGACGACGACACAGACGACAAGCAGCAG
CAGCAGGACAAGACTACCAGGACGGCGCGGCGCGACGCCGAGGACCTGGCGGCACTCGGGCACGCCGAGGCGCTG
ACGCGCAAGTTCAGCACCTGGAGCATGCTGGCCCTGGCCTTCACCGTGCTCGGCACCTGGTCGACGTGCGCGCAG
GGCCTCAGCAACGGCCTCGTCAACGGCGGGCCCGTCTCCATCCTCTGGGGCCTGGCCCTGGTGGCCGTGTGCAAC
ACGTGCGTCGCCCTGTCGCTGGGCGAGCTGTGCAGCAGCATGCCGACGGCGCTCGGCCAGGCCTACTGGATCTCG
CGCCTCGGCCGCGCCTCGCCGGCCGCCCGCTTCGCCTCGTACCTGTGCGCCTGGATCAACACGTTCGGCTGGTGG
ACGCTGGGCGCGTCGCAGATCGCCTTCATGGCCGACTTCCTGCTCGCCATGCGCCTCATCTTCCTCGACGACGAG
GCCGCCGCCGCCGCCCGCGCCGCCTGGCCCGGCTGGCTGCGCCTGCTCGTCTACCTCGCCATCACCCTTCTCTTC
ACCCTCTTCAACCTGGTCGCCTGCCGCCGCGCCGCCGTGCTGCCGGCCTTCAACAACTTCGTCGGCGTCGGCTTC
GTCGCCCTCTTCGTCGCCTTCGCCCTCGCCCTGCCCATCGCCGTCGCCGCCCGCCGCCCGGCCCTGCACTTCCAG
CGCGCCTCCTTCGTCTTCGCCGCCTGGCTCAACCGCACCGGCTGGCCCGACGCCGTCACCTGGTTCCTCGGCCTC
GTCCAGGGCGCCTACGGCCTGACCGCCTTCGACTCCGTCATCCACATGGTCGAGGAGATCCCGGCGCCGCGCCGC
AACGCGCCCCGCACCATGTCCCTCGCCGTCGTCTGCGGCGCCCTCTCCGGCTTCCTCTTCATGCTCGTCTGCCTC
TTCTGCATCCAGGACGTCGACCGCCTGCTGGCCGCGCCCTCGGGCTTCCCCTTCATCGACATCACCCAGTCGACC
GTCGGCCGCTACGGCGCCGCCGTCCTCATCGCCCTCTTCATCCTCAACGGCCTCGGCCAGGGCGTCAGCGTCATG
ACGTCGGCCTCGCGCCTGACCTGGAGCTTCGCCCGCGACGGCGGCCTGCCCTGCGGCGCCTACTTCGCCCGCGTC
GACCCCGTCTGGCACGTCCCGGCCCGCGCCCTGTGGCTGCAGGCCGCCATCACCGCCCTCGTCGGCCTGCTCTAC
CTCTTCGCCAGCTCCGTGCTGCAGGCCATCCTCAGCGTCAGCACCATCGCCCTGACCATCTCGTACGCCATGCCC
ATCGCCGCCCTGCTGCTGGCCGGCCGCCGCCGCATGCCCGCCCCGGACTTCTCCCTCGGCCGCTTCGGCCCGGCC
GTCAACCTCGTCTCGCTCGCCTACTGCGCCGTCACCACCGTCTTCTTCTTCTTCCCCAGCCGCCCGGCCCCGTCC
CCGGCCGACATGAACTACGCCATCGCCGTCTTCGGCGTCATGCTCGTCGTCGCCCTCGCCTTCTGGGCCCTCCAG
GGCCGCCTCACCTTCATGCACGGCGCCCAGGAGGCCCTGGCCGCCGCCGACGACGACGTCCTCTGGGCCCAGGAC
GTCGCCGCCGCCGCCCACGACCACGACGCCCAACGCCCCCGCGCCGCCCACGACGGCAGCCAAGGCCTGGCCGAC
GAGGCCAAGGGCGACATGGTCAAGCATCCAACGGGCGACTGA
Transcript >Hirsu2|872
ATGACGGCGGGGACGGAGAGGGAGAGGGCGGAGGCGGACGACGACGACGACGACGACACAGACGACAAGCAGCAG
CAGCAGGACAAGACTACCAGGACGGCGCGGCGCGACGCCGAGGACCTGGCGGCACTCGGGCACGCCGAGGCGCTG
ACGCGCAAGTTCAGCACCTGGAGCATGCTGGCCCTGGCCTTCACCGTGCTCGGCACCTGGTCGACGTGCGCGCAG
GGCCTCAGCAACGGCCTCGTCAACGGCGGGCCCGTCTCCATCCTCTGGGGCCTGGCCCTGGTGGCCGTGTGCAAC
ACGTGCGTCGCCCTGTCGCTGGGCGAGCTGTGCAGCAGCATGCCGACGGCGCTCGGCCAGGCCTACTGGATCTCG
CGCCTCGGCCGCGCCTCGCCGGCCGCCCGCTTCGCCTCGTACCTGTGCGCCTGGATCAACACGTTCGGCTGGTGG
ACGCTGGGCGCGTCGCAGATCGCCTTCATGGCCGACTTCCTGCTCGCCATGCGCCTCATCTTCCTCGACGACGAG
GCCGCCGCCGCCGCCCGCGCCGCCTGGCCCGGCTGGCTGCGCCTGCTCGTCTACCTCGCCATCACCCTTCTCTTC
ACCCTCTTCAACCTGGTCGCCTGCCGCCGCGCCGCCGTGCTGCCGGCCTTCAACAACTTCGTCGGCGTCGGCTTC
GTCGCCCTCTTCGTCGCCTTCGCCCTCGCCCTGCCCATCGCCGTCGCCGCCCGCCGCCCGGCCCTGCACTTCCAG
CGCGCCTCCTTCGTCTTCGCCGCCTGGCTCAACCGCACCGGCTGGCCCGACGCCGTCACCTGGTTCCTCGGCCTC
GTCCAGGGCGCCTACGGCCTGACCGCCTTCGACTCCGTCATCCACATGGTCGAGGAGATCCCGGCGCCGCGCCGC
AACGCGCCCCGCACCATGTCCCTCGCCGTCGTCTGCGGCGCCCTCTCCGGCTTCCTCTTCATGCTCGTCTGCCTC
TTCTGCATCCAGGACGTCGACCGCCTGCTGGCCGCGCCCTCGGGCTTCCCCTTCATCGACATCACCCAGTCGACC
GTCGGCCGCTACGGCGCCGCCGTCCTCATCGCCCTCTTCATCCTCAACGGCCTCGGCCAGGGCGTCAGCGTCATG
ACGTCGGCCTCGCGCCTGACCTGGAGCTTCGCCCGCGACGGCGGCCTGCCCTGCGGCGCCTACTTCGCCCGCGTC
GACCCCGTCTGGCACGTCCCGGCCCGCGCCCTGTGGCTGCAGGCCGCCATCACCGCCCTCGTCGGCCTGCTCTAC
CTCTTCGCCAGCTCCGTGCTGCAGGCCATCCTCAGCGTCAGCACCATCGCCCTGACCATCTCGTACGCCATGCCC
ATCGCCGCCCTGCTGCTGGCCGGCCGCCGCCGCATGCCCGCCCCGGACTTCTCCCTCGGCCGCTTCGGCCCGGCC
GTCAACCTCGTCTCGCTCGCCTACTGCGCCGTCACCACCGTCTTCTTCTTCTTCCCCAGCCGCCCGGCCCCGTCC
CCGGCCGACATGAACTACGCCATCGCCGTCTTCGGCGTCATGCTCGTCGTCGCCCTCGCCTTCTGGGCCCTCCAG
GGCCGCCTCACCTTCATGCACGGCGCCCAGGAGGCCCTGGCCGCCGCCGACGACGACGTCCTCTGGGCCCAGGAC
GTCGCCGCCGCCGCCCACGACCACGACGCCCAACGCCCCCGCGCCGCCCACGACGGCAGCCAAGGCCTGGCCGAC
GAGGCCAAGGGCGACATGGTCAAGCATCCAACGGGCGACTGA
Gene >Hirsu2|872
ATGACGGCGGGGACGGAGAGGGAGAGGGCGGAGGCGGACGACGACGACGACGACGACACAGACGACAAGCAGCAG
CAGCAGGACAAGACTACCAGGACGGTGAGGCCGACGACGACATGATGCCGCGCCGTGGTCACGCATCGTCAACGT
CGCCGTCGTCGCCGGTCCCGGCCCGGTCTCCCTCTTACTCTTACTCGTCGTCGTCGTCCTCCTCCTCATCGGCCG
CATCGTCACGGGCCGGGCGCCAGGCGCGGCGCGACGCCGAGGACCTGGCGGCACTCGGGCACGCCGAGGCGCTGA
CGCGCAAGTTCAGCACCTGGAGCATGCTGGCCCTGGCCTTCACCGTGCTCGGCACCTGGTCGACGTGCGCGCAGG
GCCTCAGCAACGGCCTCGTCAACGGCGGGCCCGTCTCCATCCTCTGGGGCCTGGCCCTGGTGGCCGTGTGCAACA
CGTGCGTCGCCCTGTCGCTGGGCGAGCTGTGCAGCAGCATGCCGACGGCGCTCGGCCAGGCCTACTGGATCTCGC
GCCTCGGCCGCGCCTCGCCGGCCGCCCGCTTCGCCTCGTACCTGTGCGCCTGGATCAACACGTTCGGCTGGTGGA
CGCTGGGCGCGTCGCAGATCGCCTTCATGGCCGACTTCCTGCTCGCCATGCGCCTCATCTTCCTCGACGACGAGG
CCGCCGCCGCCGCCCGCGCCGCCTGGCCCGGCTGGCTGCGCCTGCTCGTCTACCTCGCCATCACCCTTCTCTTCA
CCCTCTTCAACCTGGTCGCCTGCCGCCGCGCCGCCGTGCTGCCGGCCTTCAACAACTTCGTCGGCGTCGGCTTCG
TCGCCCTCTTCGTCGCCTTCGCCCTCGCCCTGCCCATCGCCGTCGCCGCCCGCCGCCCGGCCCTGCACTTCCAGC
GCGCCTCCTTCGTCTTCGCCGCCTGGCTCAACCGCACCGGCTGGCCCGACGCCGTCACCTGGTTCCTCGGCCTCG
TCCAGGGCGCCTACGGCCTGACCGCCTTCGACTCCGTCATCCACATGGTCGAGGAGATCCCGGCGCCGCGCCGCA
ACGCGCCCCGCACCATGTCCCTCGCCGTCGTCTGCGGCGCCCTCTCCGGCTTCCTCTTCATGCTCGTCTGCCTCT
TCTGCATCCAGGACGTCGACCGCCTGCTGGCCGCGCCCTCGGGCTTCCCCTTCATCGACATCACCCAGTCGACCG
TCGGCCGCTACGGCGCCGCCGTCCTCATCGCCCTCTTCATCCTCAACGGCCTCGGCCAGGGCGTCAGCGTCATGA
CGTCGGCCTCGCGCCTGACCTGGAGCTTCGCCCGCGACGGCGGCCTGCCCTGCGGCGCCTACTTCGCCCGCGTCG
ACCCCGTCTGGCACGTCCCGGCCCGCGCCCTGTGGCTGCAGGCCGCCATCACCGCCCTCGTCGGCCTGCTCTACC
TCTTCGCCAGCTCCGTGCTGCAGGCCATCCTCAGCGTCAGCACCATCGCCCTGACCATCTCGTACGCCATGCCCA
TCGCCGCCCTGCTGCTGGCCGGCCGCCGCCGCATGCCCGCCCCGGACTTCTCCCTCGGCCGCTTCGGCCCGGCCG
TCAACCTCGTCTCGCTCGCCTACTGCGCCGTCACCACCGTCTTCTTCTTCTTCCCCAGCCGCCCGGCCCCGTCCC
CGGCCGACATGAACTACGCCATCGCCGTCTTCGGCGTCATGCTCGTCGTCGCCCTCGCCTTCTGGGCCCTCCAGG
GCCGCCTCACCTTCATGCACGGCGCCCAGGAGGCCCTGGCCGCCGCCGACGACGACGTCCTCTGGGCCCAGGACG
TCGCCGCCGCCGCCCACGACCACGACGCCCAACGCCCCCGCGCCGCCCACGACGGCAGCCAAGGCCTGGCCGACG
AGGCCAAGGGCGACATGGTCAAGCATCCAACGGGCGACTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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