Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|8708
Gene name
Location	Contig_587:84..941
Strand	+
Gene length (bp)	857
Transcript length (bp)	678
Coding sequence length (bp)	678
Protein length (aa)	226

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF08045	CDC14	Cell division control protein 14, SIN component	1.0E-107	1	220

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P36589\|CDC14_SCHPO	Cell division control protein 14 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cdc14 PE=1 SV=1	10	223	2.0E-21

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 40	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|8708 LSQDPAFREFFKLQEGFEWNVALRLIGTLDRLMAKGSDGQNDLLILSALDLIQGLLLLHPPSKSLFAREQNMNLL LDLLEPFNCPAIQSATLLTLVVALLDTPVNTRTFEALDGLLTVTSLFKSRSTTREVKLKLVEFLYCYLMPETPSI PRAGQRDSVPAMLQRSPSKLVGAFAGDTRRKKVSGGAVMTLTTEEKQELLSRHLSSVEDLVKDLRNCAPFGGVVC *
Coding	>Hirsu2\|8708 CTGTCGCAGGACCCGGCCTTTCGCGAGTTCTTCAAGCTGCAGGAGGGCTTCGAGTGGAACGTGGCCCTGCGGCTG ATCGGCACCCTCGATCGCCTGATGGCCAAGGGCAGCGACGGCCAGAACGACCTCCTCATCCTCAGCGCCCTCGAC CTGATCCAGGGCCTGCTGCTGCTTCACCCGCCGAGCAAGTCGCTGTTCGCGCGCGAGCAAAACATGAACCTCCTC CTCGACCTCCTCGAGCCCTTCAACTGCCCTGCCATCCAGTCCGCCACGCTGCTGACGCTCGTCGTCGCCCTGCTC GACACGCCCGTCAACACGCGCACCTTCGAGGCGCTCGACGGCCTGCTGACCGTCACCTCGCTCTTCAAGTCGCGC TCGACGACGCGCGAGGTCAAGCTCAAGCTGGTCGAGTTCCTCTACTGCTACCTCATGCCCGAGACGCCCTCGATC CCGCGCGCCGGCCAGCGCGACTCGGTCCCGGCCATGCTCCAGCGCAGTCCTAGCAAGCTGGTCGGAGCCTTCGCC GGCGACACGAGGCGCAAGAAGGTCAGCGGCGGCGCCGTCATGACGCTCACGACGGAGGAGAAGCAGGAGCTGCTG AGTCGCCACCTTAGCAGCGTCGAAGACCTGGTCAAGGACCTGCGCAACTGTGCTCCCTTTGGCGGCGTCGTCTGT TGA
Transcript	>Hirsu2\|8708 CTGTCGCAGGACCCGGCCTTTCGCGAGTTCTTCAAGCTGCAGGAGGGCTTCGAGTGGAACGTGGCCCTGCGGCTG ATCGGCACCCTCGATCGCCTGATGGCCAAGGGCAGCGACGGCCAGAACGACCTCCTCATCCTCAGCGCCCTCGAC CTGATCCAGGGCCTGCTGCTGCTTCACCCGCCGAGCAAGTCGCTGTTCGCGCGCGAGCAAAACATGAACCTCCTC CTCGACCTCCTCGAGCCCTTCAACTGCCCTGCCATCCAGTCCGCCACGCTGCTGACGCTCGTCGTCGCCCTGCTC GACACGCCCGTCAACACGCGCACCTTCGAGGCGCTCGACGGCCTGCTGACCGTCACCTCGCTCTTCAAGTCGCGC TCGACGACGCGCGAGGTCAAGCTCAAGCTGGTCGAGTTCCTCTACTGCTACCTCATGCCCGAGACGCCCTCGATC CCGCGCGCCGGCCAGCGCGACTCGGTCCCGGCCATGCTCCAGCGCAGTCCTAGCAAGCTGGTCGGAGCCTTCGCC GGCGACACGAGGCGCAAGAAGGTCAGCGGCGGCGCCGTCATGACGCTCACGACGGAGGAGAAGCAGGAGCTGCTG AGTCGCCACCTTAGCAGCGTCGAAGACCTGGTCAAGGACCTGCGCAACTGTGCTCCCTTTGGCGGCGTCGTCTGT TGA
Gene	>Hirsu2\|8708 CTGTCGCAGGACCCGGCCTTTCGCGAGTTCTTCAAGCTGCAGGAGGGCTTCGAGTGGAACGTGGCCCTGCGGCTG ATCGGCACCCTCGATCGCCTGATGGCCAAGGGCAGCGACGGCCAGAACGACCTCCTCATCCTCAGCGCCCTCGAC CTGATCCAGGGCCTGCTGCTGCTTCACCCGCCGAGCAAGTCGCTGTTCGCGCGCGAGCAAAACATGAACGTTTGT CCTCCCTCCCCTTCCCCCATCTTGTCCTACCCCCCTCTGGGAACCCCTCTGGCTTCCCTCTTCCCTCCTCCTGCT TTCCCGAGTGGGAGGTCTTCCCATTCGTTGCGCAAAAGGGGCGCTTTGGCTGACAGCAAGACTCCCGACGACGGT GAATCCCGGACCGCCGGCCACAGCTCCTCCTCGACCTCCTCGAGCCCTTCAACTGCCCTGCCATCCAGTCCGCCA CGCTGCTGACGCTCGTCGTCGCCCTGCTCGACACGCCCGTCAACACGCGCACCTTCGAGGCGCTCGACGGCCTGC TGACCGTCACCTCGCTCTTCAAGTCGCGCTCGACGACGCGCGAGGTCAAGCTCAAGCTGGTCGAGTTCCTCTACT GCTACCTCATGCCCGAGACGCCCTCGATCCCGCGCGCCGGCCAGCGCGACTCGGTCCCGGCCATGCTCCAGCGCA GTCCTAGCAAGCTGGTCGGAGCCTTCGCCGGCGACACGAGGCGCAAGAAGGTCAGCGGCGGCGCCGTCATGACGC TCACGACGGAGGAGAAGCAGGAGCTGCTGAGTCGCCACCTTAGCAGCGTCGAAGACCTGGTCAAGGACCTGCGCA ACTGTGCTCCCTTTGGCGGCGTCGTCTGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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