© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|87 |
| Gene name | |
| Location | Contig_101:33118..33677 |
| Strand | - |
| Gene length (bp) | 559 |
| Transcript length (bp) | 447 |
| Coding sequence length (bp) | 447 |
| Protein length (aa) | 149 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.4947 | 0.5127 | 0.3378 | 0.096 | 0.2423 | 0.0302 | 0.0534 | 0.1186 | 0.1098 | 0.0279 |
| Orthofinder run ID | 4 |
| Orthogroup | 10701 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|87 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|87 MPQKSMTATEIVARLIEWSIGIDRRAGSLKPAEEKRVDNALRIMASTNAGKLDPYRHFLHQVHKKIGQFTVILVA ASGPTAILALKDHAREEVLGQLFEQEATIPKQHLDAIWSTYANKYLRRSGQTSILYTVDLASFLVQYKDKTLK* |
| Coding | >Hirsu2|87 ATGCCCCAAAAGTCGATGACTGCGACGGAGATAGTCGCCAGACTGATAGAATGGTCTATCGGAATCGATCGTCGA GCGGGTAGCCTTAAGCCAGCCGAGGAAAAGAGGGTCGACAATGCTCTCCGTATTATGGCATCAACAAACGCTGGG AAGTTGGACCCATATCGACACTTCCTACATCAAGTCCATAAAAAGATTGGCCAATTCACAGTCATACTTGTCGCA GCTTCTGGTCCGACTGCAATACTGGCATTGAAGGATCACGCGCGCGAGGAAGTGCTTGGCCAACTTTTCGAACAA GAAGCCACGATTCCGAAGCAGCACTTGGACGCGATATGGTCTACGTATGCAAACAAGTACCTCCGCCGAAGTGGC CAGACATCGATCTTGTATACGGTCGACCTCGCCTCCTTCTTGGTCCAGTACAAAGACAAGACTCTCAAATGA |
| Transcript | >Hirsu2|87 ATGCCCCAAAAGTCGATGACTGCGACGGAGATAGTCGCCAGACTGATAGAATGGTCTATCGGAATCGATCGTCGA GCGGGTAGCCTTAAGCCAGCCGAGGAAAAGAGGGTCGACAATGCTCTCCGTATTATGGCATCAACAAACGCTGGG AAGTTGGACCCATATCGACACTTCCTACATCAAGTCCATAAAAAGATTGGCCAATTCACAGTCATACTTGTCGCA GCTTCTGGTCCGACTGCAATACTGGCATTGAAGGATCACGCGCGCGAGGAAGTGCTTGGCCAACTTTTCGAACAA GAAGCCACGATTCCGAAGCAGCACTTGGACGCGATATGGTCTACGTATGCAAACAAGTACCTCCGCCGAAGTGGC CAGACATCGATCTTGTATACGGTCGACCTCGCCTCCTTCTTGGTCCAGTACAAAGACAAGACTCTCAAATGA |
| Gene | >Hirsu2|87 ATGCCCCAAAAGTCGATGACTGCGACGGAGATAGTCGCCAGACTGATAGAATGGTCTATCGGAATCGATCGTCGA GCGGGTAGCCTTAAGCCAGCCGAGGAAAAGAGGGTCGACAATGCTCTCCGTATTATGGCATCAACAAACGCTGGG AAGTTGGACCCATATCGACACTTCCTACATCAAGTCCATAAAAAGATTGGCCAATTCACAGTCATACTTGTCGCA GCTTCTGGTCCGACTGCAATACTGGCATTGAAGGATCACGCGCGCGAGGAAGTGCTTGGCCAACTTTTCGAACAA GAAGCCACGATTCCGAAGCAGCACTTGGACGCGATATGGTCTACGTATGCAAACAAGTGTAAGTACTTCCAGCCA TGGCCAGTCGAATGTATACTGTGGACTAATTACAAACAGACCTCCGCCGAAGTGGCCAGACATCGATCTTGTATA CGGTCGACCTCGCCTCCTTCTTGGTCCAGTACAAAGACAAGTATCCTTCTGTGCATATCAACGTCGGGCTCGAAG AAAATGACCAACCCTCTATAGGACTCTCAAATGA |