Protein ID | Hirsu2|8687 |
Gene name | |
Location | Contig_583:3935..4952 |
Strand | + |
Gene length (bp) | 1017 |
Transcript length (bp) | 930 |
Coding sequence length (bp) | 930 |
Protein length (aa) | 310 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | 0.0944 | 0.0654 | 0.8367 | 0.4106 | 0.0735 | 0.0037 | 0.2872 | 0.0923 | 0.2153 | 0.0023 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 19 | 0.999771 |
Orthofinder run ID | 4 |
Orthogroup | 452 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|8687 MHFALSVTALLAMASSALAQGKDTTIQQDKDNGPTKEFNPISTPPANETLKAGEIYMVNFTVPELYRGQKVSLEL LGGSSTGTLDALEKDGAGKPVPFATDEIDTSGPTGTFEWKVNPIKPGLAYYGLKMRLQSNPTVYQFSPGFHIEGG STAAASTGKDTASTGKDTASTGKDTASNNAGSAADDSDPVQTVVLSSVSPTASATSLVAAVKATGAAGLVDCDKN ATSSGKSSGASSGPSSSSGSSGPSGSSGSSGDLPSSPSNRLGSTATNSTGASKSGAPLQSSGAAPMVHTGLFAFT GALLAVMVL* |
Coding | >Hirsu2|8687 ATGCACTTCGCCCTCTCCGTCACGGCCTTGCTGGCCATGGCGTCGTCCGCCCTCGCCCAAGGAAAGGATACCACC ATCCAGCAGGACAAGGACAACGGTCCCACCAAGGAGTTCAACCCCATCTCGACGCCCCCAGCGAATGAAACTCTC AAGGCCGGCGAGATATATATGGTCAATTTCACGGTCCCCGAATTGTACCGCGGCCAGAAGGTCTCCCTCGAGCTC CTTGGCGGCTCGAGCACTGGCACCCTGGATGCCCTGGAGAAGGACGGTGCCGGCAAGCCCGTGCCATTCGCCACC GATGAGATCGATACCTCGGGACCAACTGGAACCTTTGAGTGGAAGGTCAACCCTATTAAGCCCGGCCTGGCGTAT TACGGCCTGAAGATGAGACTCCAGAGCAACCCAACCGTCTACCAGTTTTCGCCCGGCTTCCACATCGAGGGTGGT TCGACGGCTGCCGCTTCCACGGGCAAGGACACCGCTTCCACGGGCAAAGACACCGCTTCCACGGGCAAGGATACC GCTTCCAACAACGCGGGCTCCGCCGCCGACGATTCCGATCCAGTCCAGACCGTCGTCCTCTCGTCCGTCTCCCCT ACGGCCTCTGCCACCTCTCTTGTCGCCGCCGTCAAGGCCACGGGCGCCGCCGGCCTTGTTGACTGCGATAAGAAC GCAACCAGCTCTGGCAAGTCTTCCGGCGCTTCGTCCGGTCCGTCCAGCTCGTCCGGTTCGTCCGGTCCGTCCGGC TCGTCCGGTTCGTCTGGCGATCTGCCCTCCAGCCCGTCCAACCGGCTCGGATCCACTGCCACCAACAGCACGGGT GCCAGCAAATCGGGCGCGCCTCTTCAATCCAGCGGTGCCGCCCCCATGGTCCACACCGGCCTCTTCGCCTTCACT GGCGCTCTGCTCGCCGTCATGGTGCTGTAG |
Transcript | >Hirsu2|8687 ATGCACTTCGCCCTCTCCGTCACGGCCTTGCTGGCCATGGCGTCGTCCGCCCTCGCCCAAGGAAAGGATACCACC ATCCAGCAGGACAAGGACAACGGTCCCACCAAGGAGTTCAACCCCATCTCGACGCCCCCAGCGAATGAAACTCTC AAGGCCGGCGAGATATATATGGTCAATTTCACGGTCCCCGAATTGTACCGCGGCCAGAAGGTCTCCCTCGAGCTC CTTGGCGGCTCGAGCACTGGCACCCTGGATGCCCTGGAGAAGGACGGTGCCGGCAAGCCCGTGCCATTCGCCACC GATGAGATCGATACCTCGGGACCAACTGGAACCTTTGAGTGGAAGGTCAACCCTATTAAGCCCGGCCTGGCGTAT TACGGCCTGAAGATGAGACTCCAGAGCAACCCAACCGTCTACCAGTTTTCGCCCGGCTTCCACATCGAGGGTGGT TCGACGGCTGCCGCTTCCACGGGCAAGGACACCGCTTCCACGGGCAAAGACACCGCTTCCACGGGCAAGGATACC GCTTCCAACAACGCGGGCTCCGCCGCCGACGATTCCGATCCAGTCCAGACCGTCGTCCTCTCGTCCGTCTCCCCT ACGGCCTCTGCCACCTCTCTTGTCGCCGCCGTCAAGGCCACGGGCGCCGCCGGCCTTGTTGACTGCGATAAGAAC GCAACCAGCTCTGGCAAGTCTTCCGGCGCTTCGTCCGGTCCGTCCAGCTCGTCCGGTTCGTCCGGTCCGTCCGGC TCGTCCGGTTCGTCTGGCGATCTGCCCTCCAGCCCGTCCAACCGGCTCGGATCCACTGCCACCAACAGCACGGGT GCCAGCAAATCGGGCGCGCCTCTTCAATCCAGCGGTGCCGCCCCCATGGTCCACACCGGCCTCTTCGCCTTCACT GGCGCTCTGCTCGCCGTCATGGTGCTGTAG |
Gene | >Hirsu2|8687 ATGCACTTCGCCCTCTCCGTCACGGCCTTGCTGGCCATGGCGTCGTCCGCCCTCGCCCAAGGAAAGGATACCACC ATCCAGCAGGACAAGGACAACGGTCCCACCAAGGAGTTCAACCCCATCTCGACGCCCCCAGCGAATGAAACTCTC AAGGCCGGCGAGATATATATGGTCAATTTCACGGTCCCCGAATTGTACCGCGGCCAGAAGGTCTCCCTCGAGCTC CTTGGCGGCTCGAGCACTGGCACCCTGGATGCCCTGGAGAAGGACGGTGGTGAGTTCCTGGCCTGCCTTTCCTCT CCTCTCGTCGATGAGCCCATAGAACGCCCGCCGTTACTGACTTTTTTTTTTTTTTTTTCAGCCGGCAAGCCCGTG CCATTCGCCACCGATGAGATCGATACCTCGGGACCAACTGGAACCTTTGAGTGGAAGGTCAACCCTATTAAGCCC GGCCTGGCGTATTACGGCCTGAAGATGAGACTCCAGAGCAACCCAACCGTCTACCAGTTTTCGCCCGGCTTCCAC ATCGAGGGTGGTTCGACGGCTGCCGCTTCCACGGGCAAGGACACCGCTTCCACGGGCAAAGACACCGCTTCCACG GGCAAGGATACCGCTTCCAACAACGCGGGCTCCGCCGCCGACGATTCCGATCCAGTCCAGACCGTCGTCCTCTCG TCCGTCTCCCCTACGGCCTCTGCCACCTCTCTTGTCGCCGCCGTCAAGGCCACGGGCGCCGCCGGCCTTGTTGAC TGCGATAAGAACGCAACCAGCTCTGGCAAGTCTTCCGGCGCTTCGTCCGGTCCGTCCAGCTCGTCCGGTTCGTCC GGTCCGTCCGGCTCGTCCGGTTCGTCTGGCGATCTGCCCTCCAGCCCGTCCAACCGGCTCGGATCCACTGCCACC AACAGCACGGGTGCCAGCAAATCGGGCGCGCCTCTTCAATCCAGCGGTGCCGCCCCCATGGTCCACACCGGCCTC TTCGCCTTCACTGGCGCTCTGCTCGCCGTCATGGTGCTGTAG |