Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8674
Gene name
LocationContig_580:14634..15249
Strand-
Gene length (bp)615
Transcript length (bp)531
Coding sequence length (bp)531
Protein length (aa) 177

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03061 4HBT Thioesterase superfamily 6.0E-15 81 158

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q9CQR4|ACO13_MOUSE Acyl-coenzyme A thioesterase 13 OS=Mus musculus GN=Acot13 PE=1 SV=1 71 167 4.0E-16
sp|Q5R833|ACO13_PONAB Acyl-coenzyme A thioesterase 13 OS=Pongo abelii GN=ACOT13 PE=2 SV=1 71 167 7.0E-14
sp|Q9NPJ3|ACO13_HUMAN Acyl-coenzyme A thioesterase 13 OS=Homo sapiens GN=ACOT13 PE=1 SV=1 71 167 7.0E-14
sp|P34419|YLZ6_CAEEL Putative esterase F42H10.6 OS=Caenorhabditis elegans GN=F42H10.6 PE=1 SV=2 71 176 1.0E-08

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Peroxisome Peroxisomal targeting signal 0.6078 0.4955 0.0684 0.0462 0.0493 0.0041 0.2054 0.2403 0.0515 0.9194

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5696
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4284
Ophiocordyceps australis map64 (Brazil) OphauB2|1233
Ophiocordyceps camponoti-floridani Ophcf2|02775
Ophiocordyceps kimflemingae Ophio5|2235
Ophiocordyceps subramaniannii Hirsu2|8674 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8674
MGNDQDGAQGSSNLGVDGTPEERVREWLRLTRNESGHLKAGDWMASLVPHLDFRSAVPAMPHPSVAFAYTVQSDH
CNRLQSLHGGAVATLFDFCTTMALAIVNRPGFWQFLGVSRSLNVTYLRPARCDEEILIECHIVQVGKKLASIHGV
MKRKTDGQLLSTCQHEKVNIDPEPNL*
Coding >Hirsu2|8674
ATGGGCAACGACCAAGACGGCGCGCAAGGCAGCTCCAACCTCGGCGTCGACGGAACGCCCGAAGAAAGGGTCAGG
GAATGGCTCCGGCTCACCAGGAACGAGAGCGGCCATCTCAAAGCCGGTGACTGGATGGCTTCTCTCGTCCCCCAT
CTCGACTTCCGGTCGGCCGTGCCGGCCATGCCCCACCCGTCCGTCGCCTTCGCCTACACCGTCCAGTCGGACCAC
TGCAACCGGCTGCAGAGCCTCCACGGCGGCGCCGTCGCCACCCTCTTCGACTTCTGCACCACCATGGCCCTCGCC
ATCGTCAACCGCCCGGGCTTCTGGCAGTTCCTCGGCGTCAGCCGCTCCCTCAACGTCACCTACCTGCGCCCGGCC
CGCTGCGACGAGGAGATCCTCATCGAGTGCCACATCGTCCAGGTCGGCAAGAAGCTCGCCTCCATCCACGGCGTC
ATGAAGAGGAAGACGGATGGGCAGCTGCTGTCCACCTGCCAGCATGAAAAGGTGAACATTGACCCGGAACCAAAT
CTATGA
Transcript >Hirsu2|8674
ATGGGCAACGACCAAGACGGCGCGCAAGGCAGCTCCAACCTCGGCGTCGACGGAACGCCCGAAGAAAGGGTCAGG
GAATGGCTCCGGCTCACCAGGAACGAGAGCGGCCATCTCAAAGCCGGTGACTGGATGGCTTCTCTCGTCCCCCAT
CTCGACTTCCGGTCGGCCGTGCCGGCCATGCCCCACCCGTCCGTCGCCTTCGCCTACACCGTCCAGTCGGACCAC
TGCAACCGGCTGCAGAGCCTCCACGGCGGCGCCGTCGCCACCCTCTTCGACTTCTGCACCACCATGGCCCTCGCC
ATCGTCAACCGCCCGGGCTTCTGGCAGTTCCTCGGCGTCAGCCGCTCCCTCAACGTCACCTACCTGCGCCCGGCC
CGCTGCGACGAGGAGATCCTCATCGAGTGCCACATCGTCCAGGTCGGCAAGAAGCTCGCCTCCATCCACGGCGTC
ATGAAGAGGAAGACGGATGGGCAGCTGCTGTCCACCTGCCAGCATGAAAAGGTGAACATTGACCCGGAACCAAAT
CTATGA
Gene >Hirsu2|8674
ATGGGCAACGACCAAGACGGCGCGCAAGGCAGCTCCAACCTCGGCGTCGACGGAACGCCCGAAGAAAGGGTCAGG
GAATGGCTCCGGCTCACCAGGAACGAGAGCGGCCATCTCAAAGCCGGTGTGAGTAGAACCCCCCTCCCCCCTCCC
CCCCCATGCCCTTCTTTTTTTGTTCCAACTCTTCTCGCTCTCCGCCCCCCTCAACAGGACTGGATGGCTTCTCTC
GTCCCCCATCTCGACTTCCGGTCGGCCGTGCCGGCCATGCCCCACCCGTCCGTCGCCTTCGCCTACACCGTCCAG
TCGGACCACTGCAACCGGCTGCAGAGCCTCCACGGCGGCGCCGTCGCCACCCTCTTCGACTTCTGCACCACCATG
GCCCTCGCCATCGTCAACCGCCCGGGCTTCTGGCAGTTCCTCGGCGTCAGCCGCTCCCTCAACGTCACCTACCTG
CGCCCGGCCCGCTGCGACGAGGAGATCCTCATCGAGTGCCACATCGTCCAGGTCGGCAAGAAGCTCGCCTCCATC
CACGGCGTCATGAAGAGGAAGACGGATGGGCAGCTGCTGTCCACCTGCCAGCATGAAAAGGTGAACATTGACCCG
GAACCAAATCTATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail