Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8605
Gene name
LocationContig_572:8683..9618
Strand-
Gene length (bp)935
Transcript length (bp)795
Coding sequence length (bp)795
Protein length (aa) 265

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11563 Protoglobin Protoglobin 1.6E-58 20 196

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 40 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8605
MASSRPMKHIQREDLYTNLEARILYLHSFLDFSSNDIEALITGAKYVRALIPAVVNIVYKKLLQYDITARAFTTR
STSFDGPVDAVPDEDSPQILHRKMFLRAYLNKLCSDPSRMEFWEYLDKVGMMHVGLGRKHPLHIEYVHLGACLGY
IQDIMTEAILSHPRMHIQRKTALVKALNKVIWIQNDLMAKWHVKDGADLKVADPEDLEIEREGYLHGHKILDETL
EDGADAADAAADPAAVPVPSACPFSGSSIVDPTAVGAGR*
Coding >Hirsu2|8605
ATGGCGTCTTCCAGACCCATGAAACACATTCAGCGCGAAGACCTGTACACCAATCTTGAGGCCCGCATCCTCTAT
CTACACTCCTTTCTAGACTTTTCCAGCAACGACATCGAGGCCCTCATCACCGGTGCCAAGTATGTCCGGGCGCTC
ATCCCCGCCGTTGTCAACATCGTATACAAGAAGCTGCTGCAATACGACATCACCGCCCGCGCCTTCACAACCCGA
AGTACGTCGTTCGACGGCCCGGTCGACGCGGTGCCCGACGAGGACAGCCCCCAGATCCTCCACCGCAAGATGTTC
CTGAGGGCCTACCTGAACAAGCTGTGCTCCGATCCGAGCAGGATGGAGTTCTGGGAGTACTTGGACAAGGTCGGG
ATGATGCACGTCGGCCTCGGCCGGAAACACCCGCTCCACATCGAATACGTGCACCTGGGCGCCTGCCTGGGCTAC
ATACAGGACATCATGACCGAGGCCATCCTGTCGCATCCCCGGATGCACATCCAGCGCAAGACGGCCCTGGTCAAG
GCCCTGAACAAGGTCATCTGGATCCAGAACGACCTGATGGCCAAATGGCACGTCAAGGACGGCGCCGATCTGAAG
GTGGCCGACCCGGAGGACCTCGAAATCGAGCGCGAGGGCTATCTCCACGGCCACAAGATTCTCGACGAGACGTTG
GAGGACGGTGCCGACGCCGCTGATGCTGCCGCGGACCCGGCCGCTGTTCCCGTTCCCTCAGCTTGTCCGTTCTCC
GGCTCGAGCATCGTCGATCCAACCGCAGTAGGGGCGGGCCGTTGA
Transcript >Hirsu2|8605
ATGGCGTCTTCCAGACCCATGAAACACATTCAGCGCGAAGACCTGTACACCAATCTTGAGGCCCGCATCCTCTAT
CTACACTCCTTTCTAGACTTTTCCAGCAACGACATCGAGGCCCTCATCACCGGTGCCAAGTATGTCCGGGCGCTC
ATCCCCGCCGTTGTCAACATCGTATACAAGAAGCTGCTGCAATACGACATCACCGCCCGCGCCTTCACAACCCGA
AGTACGTCGTTCGACGGCCCGGTCGACGCGGTGCCCGACGAGGACAGCCCCCAGATCCTCCACCGCAAGATGTTC
CTGAGGGCCTACCTGAACAAGCTGTGCTCCGATCCGAGCAGGATGGAGTTCTGGGAGTACTTGGACAAGGTCGGG
ATGATGCACGTCGGCCTCGGCCGGAAACACCCGCTCCACATCGAATACGTGCACCTGGGCGCCTGCCTGGGCTAC
ATACAGGACATCATGACCGAGGCCATCCTGTCGCATCCCCGGATGCACATCCAGCGCAAGACGGCCCTGGTCAAG
GCCCTGAACAAGGTCATCTGGATCCAGAACGACCTGATGGCCAAATGGCACGTCAAGGACGGCGCCGATCTGAAG
GTGGCCGACCCGGAGGACCTCGAAATCGAGCGCGAGGGCTATCTCCACGGCCACAAGATTCTCGACGAGACGTTG
GAGGACGGTGCCGACGCCGCTGATGCTGCCGCGGACCCGGCCGCTGTTCCCGTTCCCTCAGCTTGTCCGTTCTCC
GGCTCGAGCATCGTCGATCCAACCGCAGTAGGGGCGGGCCGTTGA
Gene >Hirsu2|8605
ATGGCGTCTTCCAGACCCATGAAACACATTCAGCGCGAAGACCTGTACACCAATCTTGAGGCCCGCATCCTCTAT
CTACACTCCTTTCTAGACTTTTCCAGCAGTACGCCGTCGTCCTTCCCCCTCTAACCCGGCTCGGGGCTGACCGTG
CGACTCCGGCTCGCCCCAGACGACATCGAGGCCCTCATCACCGGTGCCAAGTATGTCCGGGCGCTCATCCCCGCC
GTTGTCAACATCGTATACAAGAAGCTGCTGCAATACGACATCACCGCCCGCGCCTTCACAACCCGAAGTACGTCG
TTCGACGGCCCGGTCGACGCGGTGCCCGACGAGGACAGCCCCCAGATCCTCCACCGCAAGATGTTCCTGAGGGCC
TACCTGAACAAGCTGTGCTCCGATCCGAGCAGGATGGAGTTCTGGGAGTACTTGGACAAGGTCGGGTAGGTCGGC
TGCCCCTTACGCCCACGCATCGCGGAAACACGAGAGAGGAGCGAGGAGTGCTGACGAGAGGCAGGATGATGCACG
TCGGCCTCGGCCGGAAACACCCGCTCCACATCGAATACGTGCACCTGGGCGCCTGCCTGGGCTACATACAGGACA
TCATGACCGAGGCCATCCTGTCGCATCCCCGGATGCACATCCAGCGCAAGACGGCCCTGGTCAAGGCCCTGAACA
AGGTCATCTGGATCCAGAACGACCTGATGGCCAAATGGCACGTCAAGGACGGCGCCGATCTGAAGGTGGCCGACC
CGGAGGACCTCGAAATCGAGCGCGAGGGCTATCTCCACGGCCACAAGATTCTCGACGAGACGTTGGAGGACGGTG
CCGACGCCGCTGATGCTGCCGCGGACCCGGCCGCTGTTCCCGTTCCCTCAGCTTGTCCGTTCTCCGGCTCGAGCA
TCGTCGATCCAACCGCAGTAGGGGCGGGCCGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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