© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|8589 |
| Gene name | |
| Location | Contig_57:47026..47572 |
| Strand | - |
| Gene length (bp) | 546 |
| Transcript length (bp) | 546 |
| Coding sequence length (bp) | 546 |
| Protein length (aa) | 182 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1084 | 0.0455 | 0.8716 | 0.0899 | 0.0741 | 0.0072 | 0.2333 | 0.2685 | 0.0334 | 0.0044 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 15 | 0.99965 |
| Orthofinder run ID | 4 |
| Orthogroup | 6932 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|10536 |
| Ophiocordyceps subramaniannii | Hirsu2|11194 |
| Ophiocordyceps subramaniannii | Hirsu2|8589 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|8589 MKFSVLLAVAGVCSAYSGHKKTDYEGAFGRMHQSFRKLEAGVKSWTGEIKVIRGTWDSYFPVAHRVVGEFKRFEK LEEADFEYITPAFERAVGSAQRTLEAYKLKKSIVEKKKLCHEFHLKAKEHFEHEHQFSEAFFSKIPSRLHKKVVT VRERFDKVVTELVDVYSPKNCHDRGTAGYHG* |
| Coding | >Hirsu2|8589 ATGAAGTTCTCCGTTCTTCTCGCTGTCGCTGGCGTCTGCTCAGCCTACAGTGGACACAAGAAGACCGACTACGAA GGCGCTTTTGGTCGCATGCACCAGTCTTTCCGCAAGCTTGAGGCTGGCGTGAAGTCCTGGACCGGCGAGATCAAG GTCATCCGCGGCACTTGGGACAGTTACTTCCCGGTCGCCCATCGCGTCGTGGGCGAATTCAAGCGCTTCGAGAAG CTCGAAGAAGCTGATTTCGAATACATCACTCCCGCTTTCGAGCGAGCCGTCGGCTCCGCACAGCGCACTCTCGAG GCCTACAAGCTGAAGAAATCCATCGTCGAGAAGAAGAAACTCTGCCATGAGTTCCACCTGAAGGCGAAGGAACAT TTCGAACACGAGCATCAGTTTTCCGAGGCTTTCTTCTCGAAGATCCCGTCTCGTCTTCACAAGAAGGTCGTAACT GTGAGGGAGAGGTTCGACAAGGTTGTGACGGAGCTGGTCGATGTCTACTCCCCGAAGAACTGCCACGACCGCGGT ACTGCAGGCTACCACGGTTAG |
| Transcript | >Hirsu2|8589 ATGAAGTTCTCCGTTCTTCTCGCTGTCGCTGGCGTCTGCTCAGCCTACAGTGGACACAAGAAGACCGACTACGAA GGCGCTTTTGGTCGCATGCACCAGTCTTTCCGCAAGCTTGAGGCTGGCGTGAAGTCCTGGACCGGCGAGATCAAG GTCATCCGCGGCACTTGGGACAGTTACTTCCCGGTCGCCCATCGCGTCGTGGGCGAATTCAAGCGCTTCGAGAAG CTCGAAGAAGCTGATTTCGAATACATCACTCCCGCTTTCGAGCGAGCCGTCGGCTCCGCACAGCGCACTCTCGAG GCCTACAAGCTGAAGAAATCCATCGTCGAGAAGAAGAAACTCTGCCATGAGTTCCACCTGAAGGCGAAGGAACAT TTCGAACACGAGCATCAGTTTTCCGAGGCTTTCTTCTCGAAGATCCCGTCTCGTCTTCACAAGAAGGTCGTAACT GTGAGGGAGAGGTTCGACAAGGTTGTGACGGAGCTGGTCGATGTCTACTCCCCGAAGAACTGCCACGACCGCGGT ACTGCAGGCTACCACGGTTAG |
| Gene | >Hirsu2|8589 ATGAAGTTCTCCGTTCTTCTCGCTGTCGCTGGCGTCTGCTCAGCCTACAGTGGACACAAGAAGACCGACTACGAA GGCGCTTTTGGTCGCATGCACCAGTCTTTCCGCAAGCTTGAGGCTGGCGTGAAGTCCTGGACCGGCGAGATCAAG GTCATCCGCGGCACTTGGGACAGTTACTTCCCGGTCGCCCATCGCGTCGTGGGCGAATTCAAGCGCTTCGAGAAG CTCGAAGAAGCTGATTTCGAATACATCACTCCCGCTTTCGAGCGAGCCGTCGGCTCCGCACAGCGCACTCTCGAG GCCTACAAGCTGAAGAAATCCATCGTCGAGAAGAAGAAACTCTGCCATGAGTTCCACCTGAAGGCGAAGGAACAT TTCGAACACGAGCATCAGTTTTCCGAGGCTTTCTTCTCGAAGATCCCGTCTCGTCTTCACAAGAAGGTCGTAACT GTGAGGGAGAGGTTCGACAAGGTTGTGACGGAGCTGGTCGATGTCTACTCCCCGAAGAACTGCCACGACCGCGGT ACTGCAGGCTACCACGGTTAG |