Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8576
Gene name
LocationContig_57:13763..14532
Strand+
Gene length (bp)769
Transcript length (bp)567
Coding sequence length (bp)567
Protein length (aa) 189

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10311 Ilm1 Increased loss of mitochondrial DNA protein 1 6.7E-65 4 179

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.5

Transmembrane Domains

Domain # Start End Length
1 9 31 22
2 57 79 22
3 86 108 22
4 150 169 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8576
MPLIAAKTIITSVSLFHITIGFFFLTSPRTISDQVLVYVLGESMRMPTVRGFDTQSPVLAFLAVVLAMFGLSDLF
ALSMPEELGSLYYWGVQAPLRALFSMLLVFYSYFLGSSSPVYGAAPPRGSGRTSGTGKSSYQPSAWGGEGLKNRV
FFTFIFLEMISWFWIWVTLREERHGVVERLRKHQPRAR*
Coding >Hirsu2|8576
ATGCCGCTCATCGCCGCCAAGACCATCATCACCTCCGTCTCTCTCTTCCACATCACCATCGGCTTCTTTTTTCTC
ACCAGCCCGCGCACCATCAGCGACCAGGTCCTCGTATACGTCCTGGGCGAGAGCATGCGCATGCCCACCGTCCGC
GGCTTCGACACGCAGAGTCCGGTGCTGGCCTTCCTCGCCGTGGTCCTGGCCATGTTTGGCCTGTCCGACCTCTTT
GCCCTGTCCATGCCCGAAGAACTCGGCTCGCTCTACTACTGGGGAGTGCAAGCACCTCTCCGCGCCCTCTTCTCC
ATGCTCCTGGTCTTCTACTCGTACTTCCTGGGCTCCTCGTCCCCCGTCTACGGCGCCGCCCCGCCCCGCGGCAGC
GGCCGCACCTCCGGCACCGGCAAGTCGTCCTACCAGCCCTCCGCCTGGGGCGGGGAAGGACTCAAGAACCGGGTC
TTCTTCACCTTCATCTTCCTCGAGATGATCAGCTGGTTTTGGATTTGGGTCACGCTGCGCGAGGAGCGTCACGGC
GTCGTCGAGCGCCTGAGGAAGCACCAGCCCCGTGCCAGGTGA
Transcript >Hirsu2|8576
ATGCCGCTCATCGCCGCCAAGACCATCATCACCTCCGTCTCTCTCTTCCACATCACCATCGGCTTCTTTTTTCTC
ACCAGCCCGCGCACCATCAGCGACCAGGTCCTCGTATACGTCCTGGGCGAGAGCATGCGCATGCCCACCGTCCGC
GGCTTCGACACGCAGAGTCCGGTGCTGGCCTTCCTCGCCGTGGTCCTGGCCATGTTTGGCCTGTCCGACCTCTTT
GCCCTGTCCATGCCCGAAGAACTCGGCTCGCTCTACTACTGGGGAGTGCAAGCACCTCTCCGCGCCCTCTTCTCC
ATGCTCCTGGTCTTCTACTCGTACTTCCTGGGCTCCTCGTCCCCCGTCTACGGCGCCGCCCCGCCCCGCGGCAGC
GGCCGCACCTCCGGCACCGGCAAGTCGTCCTACCAGCCCTCCGCCTGGGGCGGGGAAGGACTCAAGAACCGGGTC
TTCTTCACCTTCATCTTCCTCGAGATGATCAGCTGGTTTTGGATTTGGGTCACGCTGCGCGAGGAGCGTCACGGC
GTCGTCGAGCGCCTGAGGAAGCACCAGCCCCGTGCCAGGTGA
Gene >Hirsu2|8576
ATGCCGCTCATCGCCGCCAAGACCATCATCACCTCCGTCTCTCTCTTCCACATCACCATCGGCTTCTTTTTTCTC
ACCAGCCCGCGCACCATCAGCGACCAGGTCCTCGTATACGTCCTGGGCGAGAGCATGCGCATGGTAAGCGCTCGC
CACCCATGCCTCCCTGACCTTCGCTACGTGAGAAGGAAAAAGGGAAGCGCCACGGGGACGAAAGCCGCCCTAGGC
GAGGAGCGAAGAGCGTGTCGCTAACTTTCGCCTTTGTTTGCGCCCCATGTGTCCAGCCCACCGTCCGCGGCTTCG
ACACGCAGAGTCCGGTGCTGGCCTTCCTCGCCGTGGTCCTGGCCATGTTTGGCCTGTCCGACCTCTTTGCCCTGT
CCATGCCCGAAGAACTCGGCTCGCTCTACTACTGGGGAGTGCAAGGTCTGTCCCGGTCCGCTCATCTACTCTGCT
TTCGCCGCTGACTCGCCCCGGCCACCCAGCACCTCTCCGCGCCCTCTTCTCCATGCTCCTGGTCTTCTACTCGTA
CTTCCTGGGCTCCTCGTCCCCCGTCTACGGCGCCGCCCCGCCCCGCGGCAGCGGCCGCACCTCCGGCACCGGCAA
GTCGTCCTACCAGCCCTCCGCCTGGGGCGGGGAAGGACTCAAGAACCGGGTCTTCTTCACCTTCATCTTCCTCGA
GATGATCAGCTGGTTTTGGATTTGGGTCACGCTGCGCGAGGAGCGTCACGGCGTCGTCGAGCGCCTGAGGAAGCA
CCAGCCCCGTGCCAGGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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