Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8569
Gene name
LocationContig_569:10021..11134
Strand+
Gene length (bp)1113
Transcript length (bp)894
Coding sequence length (bp)894
Protein length (aa) 298

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01490 Aa_trans Transmembrane amino acid transporter protein 3.2E-14 93 258

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 42 0.45

Transmembrane Domains

Domain # Start End Length
1 94 116 22
2 126 148 22
3 175 194 19
4 214 233 19
5 240 262 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8569
MGFDINVAESRPDVCATFEEYLHWGKITRQDERAADKALREVGDHLTFKSAIQSCLSGPGRPREAPKPGLGDQRI
MLSVSEQEFKAASRAMRTASWSAVFYLITTDVLGPYSTAWAFAHMGYGPGAALFTVFGILASYSGWIIWKIFLSL
DSDRYPLRSWGDMFLRIFGRRSQRIVNWMLTFQLMLWVSIYILQCGQSISQISQGFDGQNGNGLCFVACMLLFMA
AGFIVGQIRTLDRFAWIANFSVWTNVVIMGICMGVVARYPPNFKATQASFGKEFGPGPVRTFVGIPPDSYPS*
Coding >Hirsu2|8569
ATGGGGTTCGATATCAATGTTGCCGAAAGCAGGCCCGATGTTTGCGCGACTTTCGAAGAATACTTACATTGGGGC
AAGATCACGCGCCAGGACGAGCGGGCCGCCGACAAGGCGCTCCGCGAGGTCGGCGACCATTTGACATTTAAGTCG
GCCATCCAGAGCTGCCTTTCAGGACCCGGACGACCGCGCGAGGCGCCAAAACCCGGCTTGGGCGACCAAAGAATT
ATGTTAAGTGTGTCGGAACAAGAGTTCAAAGCAGCGAGCCGGGCCATGCGCACGGCCAGCTGGAGCGCCGTCTTT
TACCTCATCACTACCGACGTCCTCGGCCCATACTCGACGGCCTGGGCTTTTGCACATATGGGTTATGGGCCCGGT
GCTGCGCTATTTACTGTATTTGGGATCTTGGCTAGCTACTCCGGTTGGATCATCTGGAAAATATTTCTCAGCCTC
GACTCGGATCGGTACCCCCTGCGCTCCTGGGGCGATATGTTCTTACGCATATTCGGCCGAAGAAGCCAGAGAATC
GTGAACTGGATGCTGACGTTTCAACTTATGCTTTGGGTCTCAATCTATATTCTCCAATGCGGCCAATCTATCTCA
CAAATTTCTCAAGGCTTCGATGGTCAGAATGGGAATGGCCTCTGTTTCGTTGCCTGCATGCTTCTCTTCATGGCG
GCTGGTTTTATTGTTGGGCAGATTCGTACCCTCGATCGATTTGCCTGGATCGCCAACTTTTCCGTCTGGACCAAC
GTGGTCATCATGGGTATTTGCATGGGTGTTGTGGCTCGGTATCCTCCAAACTTCAAGGCCACCCAGGCGTCCTTT
GGCAAGGAATTCGGCCCTGGGCCCGTCAGGACATTTGTCGGAATACCGCCAGATAGTTACCCTTCTTAG
Transcript >Hirsu2|8569
ATGGGGTTCGATATCAATGTTGCCGAAAGCAGGCCCGATGTTTGCGCGACTTTCGAAGAATACTTACATTGGGGC
AAGATCACGCGCCAGGACGAGCGGGCCGCCGACAAGGCGCTCCGCGAGGTCGGCGACCATTTGACATTTAAGTCG
GCCATCCAGAGCTGCCTTTCAGGACCCGGACGACCGCGCGAGGCGCCAAAACCCGGCTTGGGCGACCAAAGAATT
ATGTTAAGTGTGTCGGAACAAGAGTTCAAAGCAGCGAGCCGGGCCATGCGCACGGCCAGCTGGAGCGCCGTCTTT
TACCTCATCACTACCGACGTCCTCGGCCCATACTCGACGGCCTGGGCTTTTGCACATATGGGTTATGGGCCCGGT
GCTGCGCTATTTACTGTATTTGGGATCTTGGCTAGCTACTCCGGTTGGATCATCTGGAAAATATTTCTCAGCCTC
GACTCGGATCGGTACCCCCTGCGCTCCTGGGGCGATATGTTCTTACGCATATTCGGCCGAAGAAGCCAGAGAATC
GTGAACTGGATGCTGACGTTTCAACTTATGCTTTGGGTCTCAATCTATATTCTCCAATGCGGCCAATCTATCTCA
CAAATTTCTCAAGGCTTCGATGGTCAGAATGGGAATGGCCTCTGTTTCGTTGCCTGCATGCTTCTCTTCATGGCG
GCTGGTTTTATTGTTGGGCAGATTCGTACCCTCGATCGATTTGCCTGGATCGCCAACTTTTCCGTCTGGACCAAC
GTGGTCATCATGGGTATTTGCATGGGTGTTGTGGCTCGGTATCCTCCAAACTTCAAGGCCACCCAGGCGTCCTTT
GGCAAGGAATTCGGCCCTGGGCCCGTCAGGACATTTGTCGGAATACCGCCAGATAGTTACCCTTCTTAG
Gene >Hirsu2|8569
ATGGGGTTCGATATCAATGTTGCCGAAAGCAGGCCCGATGTTTGCGCGACTTTCGAAGAATACTTACATTGGGGC
AAGATCACGCGCCAGGACGAGCGGGCCGCCGACAAGGCGCTCCGCGAGGTCGGCGACCATTTGACATTTAAGTCG
GCCATCCAGAGCTGCCTTTCAGGACCCGGACGACCGCGCGAGGCGCCAAAACCCGGCTTGGGCGACCAAAGAATT
ATGTTAAGTGTGTCGGAACAAGAGTTCAAAGCAGCGAGCCGGGCCATGCGCACGGCCAGCTGGAGCGCCGTCTTT
TACCTCATCACTACCGACGTCCTCGGCCCATACTCGACGGCCTGGGCTTTTGCACATATGGGTTATGGGCCCGGT
GCTGCGCTATTTACTGTATTTGGGATCTTGGCTAGCTAGTATGTGGCCAATCTCGGCTTATTTCTCTTCGATGAG
GGGCTGCTGACGACGCCGTGCTTAGCTCCGGTTGGATCATCTGGAAAATATTTCTCAGCCTCGACTCGGATCGGT
ACCCCCTGCGCTCCTGGGGCGATATGTTCTTACGCATATTCGGCCGAAGAAGCCAGAGAATCGTGAACTGGATGC
TGACGTTTCAACTTATGCTTTGGGTCTCAATCTATATTCTCCAATGCGGCCAATCTATCTCACAAATTTCTCAAG
GCTTCGATGGTCAGAATGGGAATGGCCTCTGTTTCGTTGCCTGCATGCTTCTCTTCATGGCGGCTGGTTTTATTG
TTGGGCAGATTCGTACCCTCGATCGATTTGCCTGGATCGCCAACTTTTCCGTCTGGACCAACGTGGTCATCATGG
GTATTTGGTCGGTGGTCCCCCACCTTGCCTTTCGAGGTTTGCTGTGCAGAACAAGATCTCAGTGCTGACCTTTCT
CTAGCATGGGTGTTGTGGCTCGGTATCCTCCAAACTTCAAGGCCACCCAGGCGTCCTTTGGCAAGGAATTCGGCC
CTGGGCCCGTCAGGACATTTGTCGGAATACCGCCAGATAGTTACGTCAGTGGCGGCAGCGGCTTGCTTGGTTCTC
TTAACGGCCTAAACCAGGTCGTATTGGCATATGGGGGGTGTCTAACTTTTACAGCCTTCTTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail