Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|8569
Gene name
Location	Contig_569:10021..11134
Strand	+
Gene length (bp)	1113
Transcript length (bp)	894
Coding sequence length (bp)	894
Protein length (aa)	298

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF01490	Aa_trans	Transmembrane amino acid transporter protein	3.5E-14	93	258

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 42	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	94	116	22
2	126	148	22
3	175	194	19
4	214	233	19
5	240	262	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|8569 MGFDINVAESRPDVCATFEEYLHWGKITRQDERAADKALREVGDHLTFKSAIQSCLSGPGRPREAPKPGLGDQRI MLSVSEQEFKAASRAMRTASWSAVFYLITTDVLGPYSTAWAFAHMGYGPGAALFTVFGILASYSGWIIWKIFLSL DSDRYPLRSWGDMFLRIFGRRSQRIVNWMLTFQLMLWVSIYILQCGQSISQISQGFDGQNGNGLCFVACMLLFMA AGFIVGQIRTLDRFAWIANFSVWTNVVIMGICMGVVARYPPNFKATQASFGKEFGPGPVRTFVGIPPDSYPS*
Coding	>Hirsu2\|8569 ATGGGGTTCGATATCAATGTTGCCGAAAGCAGGCCCGATGTTTGCGCGACTTTCGAAGAATACTTACATTGGGGC AAGATCACGCGCCAGGACGAGCGGGCCGCCGACAAGGCGCTCCGCGAGGTCGGCGACCATTTGACATTTAAGTCG GCCATCCAGAGCTGCCTTTCAGGACCCGGACGACCGCGCGAGGCGCCAAAACCCGGCTTGGGCGACCAAAGAATT ATGTTAAGTGTGTCGGAACAAGAGTTCAAAGCAGCGAGCCGGGCCATGCGCACGGCCAGCTGGAGCGCCGTCTTT TACCTCATCACTACCGACGTCCTCGGCCCATACTCGACGGCCTGGGCTTTTGCACATATGGGTTATGGGCCCGGT GCTGCGCTATTTACTGTATTTGGGATCTTGGCTAGCTACTCCGGTTGGATCATCTGGAAAATATTTCTCAGCCTC GACTCGGATCGGTACCCCCTGCGCTCCTGGGGCGATATGTTCTTACGCATATTCGGCCGAAGAAGCCAGAGAATC GTGAACTGGATGCTGACGTTTCAACTTATGCTTTGGGTCTCAATCTATATTCTCCAATGCGGCCAATCTATCTCA CAAATTTCTCAAGGCTTCGATGGTCAGAATGGGAATGGCCTCTGTTTCGTTGCCTGCATGCTTCTCTTCATGGCG GCTGGTTTTATTGTTGGGCAGATTCGTACCCTCGATCGATTTGCCTGGATCGCCAACTTTTCCGTCTGGACCAAC GTGGTCATCATGGGTATTTGCATGGGTGTTGTGGCTCGGTATCCTCCAAACTTCAAGGCCACCCAGGCGTCCTTT GGCAAGGAATTCGGCCCTGGGCCCGTCAGGACATTTGTCGGAATACCGCCAGATAGTTACCCTTCTTAG
Transcript	>Hirsu2\|8569 ATGGGGTTCGATATCAATGTTGCCGAAAGCAGGCCCGATGTTTGCGCGACTTTCGAAGAATACTTACATTGGGGC AAGATCACGCGCCAGGACGAGCGGGCCGCCGACAAGGCGCTCCGCGAGGTCGGCGACCATTTGACATTTAAGTCG GCCATCCAGAGCTGCCTTTCAGGACCCGGACGACCGCGCGAGGCGCCAAAACCCGGCTTGGGCGACCAAAGAATT ATGTTAAGTGTGTCGGAACAAGAGTTCAAAGCAGCGAGCCGGGCCATGCGCACGGCCAGCTGGAGCGCCGTCTTT TACCTCATCACTACCGACGTCCTCGGCCCATACTCGACGGCCTGGGCTTTTGCACATATGGGTTATGGGCCCGGT GCTGCGCTATTTACTGTATTTGGGATCTTGGCTAGCTACTCCGGTTGGATCATCTGGAAAATATTTCTCAGCCTC GACTCGGATCGGTACCCCCTGCGCTCCTGGGGCGATATGTTCTTACGCATATTCGGCCGAAGAAGCCAGAGAATC GTGAACTGGATGCTGACGTTTCAACTTATGCTTTGGGTCTCAATCTATATTCTCCAATGCGGCCAATCTATCTCA CAAATTTCTCAAGGCTTCGATGGTCAGAATGGGAATGGCCTCTGTTTCGTTGCCTGCATGCTTCTCTTCATGGCG GCTGGTTTTATTGTTGGGCAGATTCGTACCCTCGATCGATTTGCCTGGATCGCCAACTTTTCCGTCTGGACCAAC GTGGTCATCATGGGTATTTGCATGGGTGTTGTGGCTCGGTATCCTCCAAACTTCAAGGCCACCCAGGCGTCCTTT GGCAAGGAATTCGGCCCTGGGCCCGTCAGGACATTTGTCGGAATACCGCCAGATAGTTACCCTTCTTAG
Gene	>Hirsu2\|8569 ATGGGGTTCGATATCAATGTTGCCGAAAGCAGGCCCGATGTTTGCGCGACTTTCGAAGAATACTTACATTGGGGC AAGATCACGCGCCAGGACGAGCGGGCCGCCGACAAGGCGCTCCGCGAGGTCGGCGACCATTTGACATTTAAGTCG GCCATCCAGAGCTGCCTTTCAGGACCCGGACGACCGCGCGAGGCGCCAAAACCCGGCTTGGGCGACCAAAGAATT ATGTTAAGTGTGTCGGAACAAGAGTTCAAAGCAGCGAGCCGGGCCATGCGCACGGCCAGCTGGAGCGCCGTCTTT TACCTCATCACTACCGACGTCCTCGGCCCATACTCGACGGCCTGGGCTTTTGCACATATGGGTTATGGGCCCGGT GCTGCGCTATTTACTGTATTTGGGATCTTGGCTAGCTAGTATGTGGCCAATCTCGGCTTATTTCTCTTCGATGAG GGGCTGCTGACGACGCCGTGCTTAGCTCCGGTTGGATCATCTGGAAAATATTTCTCAGCCTCGACTCGGATCGGT ACCCCCTGCGCTCCTGGGGCGATATGTTCTTACGCATATTCGGCCGAAGAAGCCAGAGAATCGTGAACTGGATGC TGACGTTTCAACTTATGCTTTGGGTCTCAATCTATATTCTCCAATGCGGCCAATCTATCTCACAAATTTCTCAAG GCTTCGATGGTCAGAATGGGAATGGCCTCTGTTTCGTTGCCTGCATGCTTCTCTTCATGGCGGCTGGTTTTATTG TTGGGCAGATTCGTACCCTCGATCGATTTGCCTGGATCGCCAACTTTTCCGTCTGGACCAACGTGGTCATCATGG GTATTTGGTCGGTGGTCCCCCACCTTGCCTTTCGAGGTTTGCTGTGCAGAACAAGATCTCAGTGCTGACCTTTCT CTAGCATGGGTGTTGTGGCTCGGTATCCTCCAAACTTCAAGGCCACCCAGGCGTCCTTTGGCAAGGAATTCGGCC CTGGGCCCGTCAGGACATTTGTCGGAATACCGCCAGATAGTTACGTCAGTGGCGGCAGCGGCTTGCTTGGTTCTC TTAACGGCCTAAACCAGGTCGTATTGGCATATGGGGGGTGTCTAACTTTTACAGCCTTCTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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