Protein ID | Hirsu2|8557 |
Gene name | |
Location | Contig_566:8693..10404 |
Strand | + |
Gene length (bp) | 1711 |
Transcript length (bp) | 1272 |
Coding sequence length (bp) | 1272 |
Protein length (aa) | 424 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13489 | Methyltransf_23 | Methyltransferase domain | 3.1E-14 | 174 | 330 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | 0.7199 | 0.4266 | 0.101 | 0.1177 | 0.2369 | 0.0434 | 0.2393 | 0.2395 | 0.2847 | 0.0632 |
Orthofinder run ID | 4 |
Orthogroup | 158 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|8557 MPVVAPCWHSASDPQALDKSWIAVDGQDGCSHPASARPTNGRGQTDCQGAPPVRDLQLTAAMGSQRHGAGPGHDD EAALSLQTFQFTFQCASVTRESSSSIEPDAASGSIRESSVSLSESVQTFPEEFGRTYHAYRAGSYAFPNDVPEQE RLALQAETLRRLFGGRLYFAPLSPSTPPRTILDVATGLGDWAIQMGDLFPTSQIVATDLSPIQPKQVPPNVNFYV EDSSDPWEYSQRFDYIHTRATAGCWSSFEKQVAQQAFDTLEPGGWFESQEIDSQVACDDGTLDPQGPLARWFQEL ADAGEKCDRPFVLGATLKEVFERVGFVDVQQRIFKIPTNGWAREDRMKELGRMWEKNILAGLSGFSFRPFNRVYG RSPAQIEVSLVDVRHDVSNPQIHAYNPIYVVWGRKPFAGERPVPSPPF* |
Coding | >Hirsu2|8557 ATGCCCGTCGTCGCCCCTTGTTGGCATTCCGCCTCGGATCCCCAGGCGCTCGACAAGTCGTGGATCGCCGTCGAC GGCCAAGACGGCTGCTCCCATCCCGCCAGCGCCCGCCCGACCAATGGACGCGGCCAGACCGACTGTCAAGGCGCA CCACCAGTCCGCGACCTGCAGCTGACGGCAGCCATGGGGAGTCAACGGCACGGGGCCGGGCCCGGCCATGACGAC GAGGCGGCCTTGAGCCTGCAGACCTTCCAGTTCACCTTTCAGTGCGCGTCGGTGACGCGTGAGTCGAGCAGTAGC ATCGAGCCCGACGCCGCGTCAGGGTCAATAAGAGAGTCGTCGGTGTCGCTGTCGGAGAGCGTGCAGACCTTTCCG GAGGAGTTCGGGCGCACCTACCACGCCTACCGCGCCGGCTCCTACGCCTTCCCCAACGACGTTCCAGAGCAGGAG CGGCTGGCGCTGCAGGCCGAGACACTCCGCCGGCTCTTCGGCGGCCGGCTTTACTTTGCTCCCCTCTCGCCATCA ACGCCTCCGCGCACCATCCTCGACGTGGCCACGGGCCTCGGCGACTGGGCCATCCAGATGGGCGACCTGTTTCCC ACGTCCCAGATCGTCGCCACCGACCTGTCGCCGATCCAGCCCAAGCAGGTGCCTCCCAACGTCAACTTCTACGTC GAGGACTCGTCCGACCCGTGGGAATACTCGCAGAGATTCGACTACATCCACACCCGCGCCACTGCCGGCTGCTGG TCCTCGTTCGAGAAGCAGGTCGCCCAGCAGGCATTCGACACGCTCGAGCCCGGCGGGTGGTTCGAATCGCAAGAG ATCGATAGCCAGGTGGCGTGTGACGACGGCACCCTCGATCCCCAAGGCCCCCTGGCGCGCTGGTTTCAGGAGCTG GCCGATGCCGGCGAAAAATGCGACCGACCCTTCGTGCTGGGCGCCACGCTCAAGGAGGTTTTCGAGCGCGTCGGC TTCGTCGATGTCCAGCAGCGCATCTTCAAGATACCCACCAACGGCTGGGCCAGGGAGGACCGGATGAAAGAGCTG GGACGGATGTGGGAAAAGAACATCCTGGCAGGACTGAGCGGCTTCTCCTTCCGGCCCTTCAACCGCGTCTACGGT CGGAGCCCAGCGCAAATCGAGGTGTCGCTGGTTGACGTACGGCACGACGTTTCAAACCCGCAGATACACGCTTAC AACCCCATCTACGTCGTCTGGGGGAGGAAACCCTTTGCGGGAGAACGACCGGTCCCGAGTCCTCCGTTTTGA |
Transcript | >Hirsu2|8557 ATGCCCGTCGTCGCCCCTTGTTGGCATTCCGCCTCGGATCCCCAGGCGCTCGACAAGTCGTGGATCGCCGTCGAC GGCCAAGACGGCTGCTCCCATCCCGCCAGCGCCCGCCCGACCAATGGACGCGGCCAGACCGACTGTCAAGGCGCA CCACCAGTCCGCGACCTGCAGCTGACGGCAGCCATGGGGAGTCAACGGCACGGGGCCGGGCCCGGCCATGACGAC GAGGCGGCCTTGAGCCTGCAGACCTTCCAGTTCACCTTTCAGTGCGCGTCGGTGACGCGTGAGTCGAGCAGTAGC ATCGAGCCCGACGCCGCGTCAGGGTCAATAAGAGAGTCGTCGGTGTCGCTGTCGGAGAGCGTGCAGACCTTTCCG GAGGAGTTCGGGCGCACCTACCACGCCTACCGCGCCGGCTCCTACGCCTTCCCCAACGACGTTCCAGAGCAGGAG CGGCTGGCGCTGCAGGCCGAGACACTCCGCCGGCTCTTCGGCGGCCGGCTTTACTTTGCTCCCCTCTCGCCATCA ACGCCTCCGCGCACCATCCTCGACGTGGCCACGGGCCTCGGCGACTGGGCCATCCAGATGGGCGACCTGTTTCCC ACGTCCCAGATCGTCGCCACCGACCTGTCGCCGATCCAGCCCAAGCAGGTGCCTCCCAACGTCAACTTCTACGTC GAGGACTCGTCCGACCCGTGGGAATACTCGCAGAGATTCGACTACATCCACACCCGCGCCACTGCCGGCTGCTGG TCCTCGTTCGAGAAGCAGGTCGCCCAGCAGGCATTCGACACGCTCGAGCCCGGCGGGTGGTTCGAATCGCAAGAG ATCGATAGCCAGGTGGCGTGTGACGACGGCACCCTCGATCCCCAAGGCCCCCTGGCGCGCTGGTTTCAGGAGCTG GCCGATGCCGGCGAAAAATGCGACCGACCCTTCGTGCTGGGCGCCACGCTCAAGGAGGTTTTCGAGCGCGTCGGC TTCGTCGATGTCCAGCAGCGCATCTTCAAGATACCCACCAACGGCTGGGCCAGGGAGGACCGGATGAAAGAGCTG GGACGGATGTGGGAAAAGAACATCCTGGCAGGACTGAGCGGCTTCTCCTTCCGGCCCTTCAACCGCGTCTACGGT CGGAGCCCAGCGCAAATCGAGGTGTCGCTGGTTGACGTACGGCACGACGTTTCAAACCCGCAGATACACGCTTAC AACCCCATCTACGTCGTCTGGGGGAGGAAACCCTTTGCGGGAGAACGACCGGTCCCGAGTCCTCCGTTTTGA |
Gene | >Hirsu2|8557 ATGCCCGTCGTCGCCCCTTGTTGGCATTCCGCCTCGGATCCCCAGGCGCTCGACAAGTCGTGGATCGCCGTCGAC GGCCAAGACGGCTGCTCCCATCCCGCCAGCGCCCGCCCGACCAATGGACGCGGCCAGACCGACTGTCAAGGCGCA CCACCAGTCCGCGACCTGCAGCTGACGGCAGCCATGGGGAGTCAACGGCACGGGGCCGGGCCCGGCCATGACGAC GAGGCGGCCTTGAGCCTGCAGACCTTCCAGTTCACCTTTCAGTGCGCGTCGGTGACGCGTGAGTCGAGCAGTAGC ATCGAGCCCGACGTACGTACCGCTCAGCCTCCCCCGGTCTCTCCCCCGTCTCTCCCCCGTCTCTCCCCCCCTCCT TCAAGCTGCCGGTGGCGTGGAAGCGCAGGCTTGGCCTGTCGAGGCCCCACGATCTGCTGACTCGGCCTCCCCCCC CCAGGCCGCGTCAGGGTCAATGTAAGTATCGCCGTCCGACCGGCCGATGGCGTCGTGGCGGATGCTGACCGAGGC GGCCAAAAGAAGAGAGTCGTCGGTGTCGCTGTCGGAGAGCGTGCAGACCTTTCCGGAGGAGTTCGGGCGCACCTA CCACGCCTACCGCGCCGGCTGTGAGACGCTCCTTCCCACTCCTCCACGGGGCTCCGGGCTCCGGGCTCCGGACTC CGGGCTAACGCTCACTCCCTCGCTCCTCCCCGCAGCCTACGCCTTCCCCAACGACGTTCCAGAGCAGGAGCGGCT GGCGCTGCAGGCCGAGACACTCCGCCGGCTCTTCGGCGGCCGGCTTTACTTTGCTCCCCTCTCGCCATCAACGCC TCCGCGCACCATCCTCGACGTGGCCACGGGCCTCGGCGACTGGGCCATCCAGATGGGCGACCTGTTTCCCACGTC CCAGATCGTCGCCACCGACCTGTCGCCGATCCAGCCCAAGCAGGTGCCTCCCAACGTCAACTTCTACGTCGAGGA CTCGTAAGTGGCTCAGGCCAAGGTCGGCGAGCTTCCTCTGACGCCTCCTCTCGCAGGTCCGACCCGTGGGAATAC TCGCAGAGATTCGACTACATCCACACCCGCGCCACTGCCGGCTGCTGGTCCTCGTTCGAGAAGCAGGTCGCCCAG CAGGCATTCGACACGCTCGAGCCCGGCGGGTGGTTCGAATCGCAAGAGATCGATAGCCAGGTGGCGTGTGACGAC GGCACCCTCGATCCCCAAGGCCCCCTGGCGCGCTGGTTTCAGGAGCTGGCCGATGCCGGCGAAAAATGCGACCGA CCCTTCGTGCTGGGCGCCACGCTCAAGGAGGTTTTCGAGCGCGTCGGCTTCGTCGATGTCCAGCAGCGCATCTTC AAGATACCCACCAACGGCTGGGCCAGGGAGGACCGGATGAAAGAGCTGGGACGGATGTGGGAAAAGAACATCCTG GCAGGACTGAGCGGCTTCTCCTTCCGGCCCTTCAACCGCGTCTACGGTCGGAGCCCAGCGCAAATCGAGGTTAGC GTTGATTTCATGCACTTTGCTTTTGAACGACAGACGTCCGATCCCCGAGAGACACATGGCTCAGCCCCGCTAACA GCCTCGGCAGGTGTCGCTGGTTGACGTACGGCACGACGTTTCAAACCCGCAGATACACGCTTACAACCCCATCTA CGTCGTCTGGGGGAGGAAACCCTTTGCGGGAGAACGACCGGTCCCGAGTCCTCCGTTTTGA |