© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|8530 |
| Gene name | |
| Location | Contig_562:4941..6135 |
| Strand | + |
| Gene length (bp) | 1194 |
| Transcript length (bp) | 1194 |
| Coding sequence length (bp) | 1194 |
| Protein length (aa) | 398 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03080 | Neprosin | Neprosin | 1.3E-40 | 164 | 389 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.1914 | 0.0924 | 0.9043 | 0.126 | 0.1852 | 0.1733 | 0.1448 | 0.1825 | 0.1014 | 0.0152 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 23 | 0.690314 |
| Orthofinder run ID | 4 |
| Orthogroup | 6773 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps australis 1348a (Ghana) | OphauG2|4648 |
| Ophiocordyceps australis map64 (Brazil) | OphauB2|5806 |
| Ophiocordyceps subramaniannii | Hirsu2|8530 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|8530 MLRLLSRTLPAMAVLLQAASPAPVDERGGPLKVVATTTNAAGQVIDWVEPQSQGRIASPPPVSPFEKRDGRAMSA AMVIPADPAMNGPEGTVPILRSGGPTLPTKRLPEPGDDGLARNNNNNETRAAAPSFAGQHWYASSGQVVANRGGR ARFSLYRPYVQSGSDFSLLQTAVIRRSAAHAGGTGRVTQTVEAGWINYPNQVQPPHLFAFYTTNGYRGDGDGVGG WNRDRAGWVQVDRLIYPGVPFGPLSADGGGQYEVEIGFLLYQGNWWLWAVDRYVGYYPGSLFAGGGVDRADTLAA GADAINFYGEIFNSVPWMTTTDMGSGRFPESGFGHAAFIRNIVYVDPAGARRDYDGGAQIVVSDRARYRLQTAFR SGSSWGSYVFLGGPGAGGVVGG* |
| Coding | >Hirsu2|8530 ATGTTGCGGCTTCTCTCCAGAACGCTGCCGGCCATGGCGGTGCTGCTCCAGGCAGCGTCTCCTGCGCCGGTGGAC GAGCGCGGAGGGCCGTTGAAGGTGGTCGCGACGACCACCAACGCCGCCGGGCAGGTTATCGACTGGGTCGAGCCC CAGTCGCAGGGCAGGATCGCGAGCCCGCCCCCGGTTTCGCCGTTCGAGAAACGCGACGGCCGGGCGATGAGTGCG GCGATGGTGATCCCCGCGGACCCGGCGATGAACGGCCCGGAGGGCACGGTGCCGATCCTCCGAAGCGGCGGCCCC ACCTTGCCGACGAAACGGCTCCCGGAGCCGGGCGACGACGGGCTAGCGCGGAACAACAACAACAACGAGACGCGG GCGGCGGCGCCGTCGTTCGCCGGACAGCACTGGTATGCCAGCTCGGGCCAGGTGGTGGCCAATCGCGGCGGGCGG GCGCGGTTCAGCCTGTACCGGCCGTACGTGCAGAGCGGCAGCGACTTCTCGCTGCTGCAGACGGCCGTGATCCGG CGCAGCGCGGCGCACGCGGGGGGCACGGGCCGGGTGACGCAGACGGTGGAGGCGGGCTGGATCAACTACCCGAAC CAGGTGCAGCCGCCGCACCTGTTCGCCTTCTACACCACCAACGGCTACCGCGGGGACGGCGACGGCGTCGGCGGC TGGAACCGCGACCGCGCCGGCTGGGTCCAGGTCGACCGGCTCATCTACCCGGGCGTGCCGTTCGGCCCGCTGTCG GCGGACGGCGGCGGCCAGTACGAGGTCGAGATCGGCTTCCTGCTCTACCAGGGCAACTGGTGGCTCTGGGCCGTC GACCGCTACGTCGGCTACTACCCGGGCTCGCTCTTCGCCGGCGGCGGCGTCGACCGCGCCGACACGCTGGCCGCC GGCGCCGACGCCATCAACTTCTACGGCGAGATCTTCAACAGCGTGCCGTGGATGACGACGACGGACATGGGCAGC GGCCGCTTCCCGGAGAGCGGCTTCGGCCACGCCGCCTTCATCCGCAACATCGTCTACGTCGACCCGGCCGGCGCC CGGCGCGACTACGACGGCGGAGCCCAGATCGTCGTCAGCGACCGCGCCCGCTACCGCCTCCAGACCGCCTTCCGC TCCGGCAGCAGCTGGGGCAGCTACGTCTTCCTCGGCGGGCCTGGCGCCGGCGGCGTCGTCGGCGGATGA |
| Transcript | >Hirsu2|8530 ATGTTGCGGCTTCTCTCCAGAACGCTGCCGGCCATGGCGGTGCTGCTCCAGGCAGCGTCTCCTGCGCCGGTGGAC GAGCGCGGAGGGCCGTTGAAGGTGGTCGCGACGACCACCAACGCCGCCGGGCAGGTTATCGACTGGGTCGAGCCC CAGTCGCAGGGCAGGATCGCGAGCCCGCCCCCGGTTTCGCCGTTCGAGAAACGCGACGGCCGGGCGATGAGTGCG GCGATGGTGATCCCCGCGGACCCGGCGATGAACGGCCCGGAGGGCACGGTGCCGATCCTCCGAAGCGGCGGCCCC ACCTTGCCGACGAAACGGCTCCCGGAGCCGGGCGACGACGGGCTAGCGCGGAACAACAACAACAACGAGACGCGG GCGGCGGCGCCGTCGTTCGCCGGACAGCACTGGTATGCCAGCTCGGGCCAGGTGGTGGCCAATCGCGGCGGGCGG GCGCGGTTCAGCCTGTACCGGCCGTACGTGCAGAGCGGCAGCGACTTCTCGCTGCTGCAGACGGCCGTGATCCGG CGCAGCGCGGCGCACGCGGGGGGCACGGGCCGGGTGACGCAGACGGTGGAGGCGGGCTGGATCAACTACCCGAAC CAGGTGCAGCCGCCGCACCTGTTCGCCTTCTACACCACCAACGGCTACCGCGGGGACGGCGACGGCGTCGGCGGC TGGAACCGCGACCGCGCCGGCTGGGTCCAGGTCGACCGGCTCATCTACCCGGGCGTGCCGTTCGGCCCGCTGTCG GCGGACGGCGGCGGCCAGTACGAGGTCGAGATCGGCTTCCTGCTCTACCAGGGCAACTGGTGGCTCTGGGCCGTC GACCGCTACGTCGGCTACTACCCGGGCTCGCTCTTCGCCGGCGGCGGCGTCGACCGCGCCGACACGCTGGCCGCC GGCGCCGACGCCATCAACTTCTACGGCGAGATCTTCAACAGCGTGCCGTGGATGACGACGACGGACATGGGCAGC GGCCGCTTCCCGGAGAGCGGCTTCGGCCACGCCGCCTTCATCCGCAACATCGTCTACGTCGACCCGGCCGGCGCC CGGCGCGACTACGACGGCGGAGCCCAGATCGTCGTCAGCGACCGCGCCCGCTACCGCCTCCAGACCGCCTTCCGC TCCGGCAGCAGCTGGGGCAGCTACGTCTTCCTCGGCGGGCCTGGCGCCGGCGGCGTCGTCGGCGGATGA |
| Gene | >Hirsu2|8530 ATGTTGCGGCTTCTCTCCAGAACGCTGCCGGCCATGGCGGTGCTGCTCCAGGCAGCGTCTCCTGCGCCGGTGGAC GAGCGCGGAGGGCCGTTGAAGGTGGTCGCGACGACCACCAACGCCGCCGGGCAGGTTATCGACTGGGTCGAGCCC CAGTCGCAGGGCAGGATCGCGAGCCCGCCCCCGGTTTCGCCGTTCGAGAAACGCGACGGCCGGGCGATGAGTGCG GCGATGGTGATCCCCGCGGACCCGGCGATGAACGGCCCGGAGGGCACGGTGCCGATCCTCCGAAGCGGCGGCCCC ACCTTGCCGACGAAACGGCTCCCGGAGCCGGGCGACGACGGGCTAGCGCGGAACAACAACAACAACGAGACGCGG GCGGCGGCGCCGTCGTTCGCCGGACAGCACTGGTATGCCAGCTCGGGCCAGGTGGTGGCCAATCGCGGCGGGCGG GCGCGGTTCAGCCTGTACCGGCCGTACGTGCAGAGCGGCAGCGACTTCTCGCTGCTGCAGACGGCCGTGATCCGG CGCAGCGCGGCGCACGCGGGGGGCACGGGCCGGGTGACGCAGACGGTGGAGGCGGGCTGGATCAACTACCCGAAC CAGGTGCAGCCGCCGCACCTGTTCGCCTTCTACACCACCAACGGCTACCGCGGGGACGGCGACGGCGTCGGCGGC TGGAACCGCGACCGCGCCGGCTGGGTCCAGGTCGACCGGCTCATCTACCCGGGCGTGCCGTTCGGCCCGCTGTCG GCGGACGGCGGCGGCCAGTACGAGGTCGAGATCGGCTTCCTGCTCTACCAGGGCAACTGGTGGCTCTGGGCCGTC GACCGCTACGTCGGCTACTACCCGGGCTCGCTCTTCGCCGGCGGCGGCGTCGACCGCGCCGACACGCTGGCCGCC GGCGCCGACGCCATCAACTTCTACGGCGAGATCTTCAACAGCGTGCCGTGGATGACGACGACGGACATGGGCAGC GGCCGCTTCCCGGAGAGCGGCTTCGGCCACGCCGCCTTCATCCGCAACATCGTCTACGTCGACCCGGCCGGCGCC CGGCGCGACTACGACGGCGGAGCCCAGATCGTCGTCAGCGACCGCGCCCGCTACCGCCTCCAGACCGCCTTCCGC TCCGGCAGCAGCTGGGGCAGCTACGTCTTCCTCGGCGGGCCTGGCGCCGGCGGCGTCGTCGGCGGATGA |