© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|8521 |
| Gene name | |
| Location | Contig_561:4102..5550 |
| Strand | - |
| Gene length (bp) | 1448 |
| Transcript length (bp) | 1089 |
| Coding sequence length (bp) | 1089 |
| Protein length (aa) | 363 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01222 | ERG4_ERG24 | Ergosterol biosynthesis ERG4/ERG24 family | 1.2E-06 | 19 | 162 |
| PF01222 | ERG4_ERG24 | Ergosterol biosynthesis ERG4/ERG24 family | 1.1E-08 | 203 | 278 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q7SXF1|DHCR7_DANRE | 7-dehydrocholesterol reductase OS=Danio rerio GN=dhcr7 PE=2 SV=1 | 3 | 347 | 9.0E-31 |
| sp|Q7ZXH1|DHCR7_XENLA | 7-dehydrocholesterol reductase OS=Xenopus laevis GN=dhcr7 PE=2 SV=1 | 22 | 347 | 8.0E-27 |
| sp|Q6P4M0|DHCR7_XENTR | 7-dehydrocholesterol reductase OS=Xenopus tropicalis GN=dhcr7 PE=2 SV=1 | 17 | 347 | 6.0E-26 |
| sp|Q9LDU6|ST7R_ARATH | 7-dehydrocholesterol reductase OS=Arabidopsis thaliana GN=DWF5 PE=1 SV=1 | 13 | 307 | 9.0E-24 |
| sp|Q9UBM7|DHCR7_HUMAN | 7-dehydrocholesterol reductase OS=Homo sapiens GN=DHCR7 PE=1 SV=1 | 75 | 307 | 1.0E-22 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q7SXF1|DHCR7_DANRE | 7-dehydrocholesterol reductase OS=Danio rerio GN=dhcr7 PE=2 SV=1 | 3 | 347 | 9.0E-31 |
| sp|Q7ZXH1|DHCR7_XENLA | 7-dehydrocholesterol reductase OS=Xenopus laevis GN=dhcr7 PE=2 SV=1 | 22 | 347 | 8.0E-27 |
| sp|Q6P4M0|DHCR7_XENTR | 7-dehydrocholesterol reductase OS=Xenopus tropicalis GN=dhcr7 PE=2 SV=1 | 17 | 347 | 6.0E-26 |
| sp|Q9LDU6|ST7R_ARATH | 7-dehydrocholesterol reductase OS=Arabidopsis thaliana GN=DWF5 PE=1 SV=1 | 13 | 307 | 9.0E-24 |
| sp|Q9UBM7|DHCR7_HUMAN | 7-dehydrocholesterol reductase OS=Homo sapiens GN=DHCR7 PE=1 SV=1 | 75 | 307 | 1.0E-22 |
| sp|Q5E9J5|DHCR7_BOVIN | 7-dehydrocholesterol reductase OS=Bos taurus GN=DHCR7 PE=2 SV=1 | 62 | 347 | 2.0E-22 |
| sp|O88455|DHCR7_MOUSE | 7-dehydrocholesterol reductase OS=Mus musculus GN=Dhcr7 PE=1 SV=1 | 22 | 347 | 1.0E-21 |
| sp|Q9Z2Z8|DHCR7_RAT | 7-dehydrocholesterol reductase OS=Rattus norvegicus GN=Dhcr7 PE=2 SV=1 | 62 | 347 | 3.0E-21 |
| sp|Q5UQI4|DHCR7_MIMIV | Probable 7-dehydrocholesterol reductase OS=Acanthamoeba polyphaga mimivirus GN=DHCR7 PE=3 SV=1 | 8 | 307 | 3.0E-15 |
| sp|Q54PP1|ERG24_DICDI | Delta(14)-sterol reductase OS=Dictyostelium discoideum GN=erg24 PE=3 SV=1 | 27 | 307 | 7.0E-15 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016126 | sterol biosynthetic process | Yes |
| GO:0016020 | membrane | Yes |
| GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | Yes |
| GO:0016491 | oxidoreductase activity | No |
| GO:0008150 | biological_process | No |
| GO:1901615 | organic hydroxy compound metabolic process | No |
| GO:0009058 | biosynthetic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0006694 | steroid biosynthetic process | No |
| GO:0006629 | lipid metabolic process | No |
| GO:0016125 | sterol metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | No |
| GO:1901362 | organic cyclic compound biosynthetic process | No |
| GO:0008202 | steroid metabolic process | No |
| GO:0008610 | lipid biosynthetic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:1901617 | organic hydroxy compound biosynthetic process | No |
| GO:0003674 | molecular_function | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 35 | 22 |
| 2 | 74 | 96 | 22 |
| 3 | 109 | 131 | 22 |
| 4 | 141 | 160 | 19 |
| 5 | 211 | 229 | 18 |
| 6 | 239 | 261 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|8521 MYEPRVTGRTKVLLNEALSMALITGSPILLLFYWITYNFFDASLSASGAALLHEGAATFFLSRLPWPTISSLKGY GFWVVSQALLYHFLPGALHLAPRTPGGRRLLYRLNGLLAWFLTVAVAAAASYFGTLDPTVIAKQWGEGLATANVY ALTLVGVFYVKARVRPDEPGDTLFTGECRTPYAASPKLTKRCGRAFLIRFYETLDGAHERFSFYSIYGFAAMMPQ LWTLQTQYLAKHPVDLSYGVIAGTIALFALGWMLNHDANRQKSLSRQTAGRCVIWGAPAQFLEATYKTADGKTHR TVLLCSGNTPPAVQPLTTADTYSQAGGGWCGMQTTSGHSCIPGPHACHAASITSYRTLKQSS* |
| Coding | >Hirsu2|8521 ATGTATGAGCCAAGAGTCACAGGTCGGACCAAGGTCCTCCTCAACGAAGCTCTAAGTATGGCTCTTATCACAGGG AGTCCCATTCTGCTTCTTTTCTATTGGATCACGTACAACTTCTTCGACGCCTCGCTCTCGGCAAGCGGAGCAGCT CTGCTCCATGAAGGCGCAGCCACGTTCTTTTTGTCGCGCCTGCCATGGCCGACGATTTCTTCACTCAAGGGCTAC GGGTTTTGGGTTGTTTCTCAAGCTCTGCTATATCATTTCCTGCCAGGTGCTCTCCATCTTGCACCCCGGACCCCT GGCGGAAGACGGCTACTTTACAGATTGAACGGGCTTCTCGCCTGGTTCCTGACCGTTGCGGTTGCGGCTGCAGCC TCTTACTTTGGGACTTTGGACCCTACAGTTATCGCAAAACAATGGGGAGAAGGCTTAGCGACCGCCAACGTTTAC GCACTCACCTTGGTGGGCGTCTTCTATGTCAAGGCTCGCGTTAGACCAGACGAACCTGGAGACACGCTATTCACA GGCGAGTGCCGTACACCGTACGCTGCTTCCCCCAAGCTCACAAAAAGATGCGGTAGGGCATTTCTGATCAGGTTC TACGAAACGCTAGACGGCGCCCACGAGCGGTTCTCCTTCTACAGCATCTACGGCTTTGCTGCCATGATGCCGCAG CTATGGACCCTACAGACGCAATACTTGGCGAAGCACCCAGTGGACCTGTCATACGGCGTCATTGCCGGCACTATC GCTTTGTTTGCTTTGGGGTGGATGCTGAACCACGATGCAAACCGACAGAAGAGCCTGTCGAGGCAAACTGCCGGA CGGTGCGTCATCTGGGGAGCGCCCGCCCAGTTCCTCGAAGCGACCTATAAGACTGCCGACGGAAAGACGCACCGA ACAGTCTTACTATGCTCCGGTAACACGCCGCCCGCAGTCCAGCCTCTGACAACAGCTGATACGTATAGCCAGGCT GGTGGGGGATGGTGCGGCATGCAAACTACGTCGGGTCACTCCTGTATACCTGGGCCTCATGCGTGTCATGCGGCT TCGATCACCTCTTACCGTACACTGAAGCAATCATCGTGA |
| Transcript | >Hirsu2|8521 ATGTATGAGCCAAGAGTCACAGGTCGGACCAAGGTCCTCCTCAACGAAGCTCTAAGTATGGCTCTTATCACAGGG AGTCCCATTCTGCTTCTTTTCTATTGGATCACGTACAACTTCTTCGACGCCTCGCTCTCGGCAAGCGGAGCAGCT CTGCTCCATGAAGGCGCAGCCACGTTCTTTTTGTCGCGCCTGCCATGGCCGACGATTTCTTCACTCAAGGGCTAC GGGTTTTGGGTTGTTTCTCAAGCTCTGCTATATCATTTCCTGCCAGGTGCTCTCCATCTTGCACCCCGGACCCCT GGCGGAAGACGGCTACTTTACAGATTGAACGGGCTTCTCGCCTGGTTCCTGACCGTTGCGGTTGCGGCTGCAGCC TCTTACTTTGGGACTTTGGACCCTACAGTTATCGCAAAACAATGGGGAGAAGGCTTAGCGACCGCCAACGTTTAC GCACTCACCTTGGTGGGCGTCTTCTATGTCAAGGCTCGCGTTAGACCAGACGAACCTGGAGACACGCTATTCACA GGCGAGTGCCGTACACCGTACGCTGCTTCCCCCAAGCTCACAAAAAGATGCGGTAGGGCATTTCTGATCAGGTTC TACGAAACGCTAGACGGCGCCCACGAGCGGTTCTCCTTCTACAGCATCTACGGCTTTGCTGCCATGATGCCGCAG CTATGGACCCTACAGACGCAATACTTGGCGAAGCACCCAGTGGACCTGTCATACGGCGTCATTGCCGGCACTATC GCTTTGTTTGCTTTGGGGTGGATGCTGAACCACGATGCAAACCGACAGAAGAGCCTGTCGAGGCAAACTGCCGGA CGGTGCGTCATCTGGGGAGCGCCCGCCCAGTTCCTCGAAGCGACCTATAAGACTGCCGACGGAAAGACGCACCGA ACAGTCTTACTATGCTCCGGTAACACGCCGCCCGCAGTCCAGCCTCTGACAACAGCTGATACGTATAGCCAGGCT GGTGGGGGATGGTGCGGCATGCAAACTACGTCGGGTCACTCCTGTATACCTGGGCCTCATGCGTGTCATGCGGCT TCGATCACCTCTTACCGTACACTGAAGCAATCATCGTGA |
| Gene | >Hirsu2|8521 ATGTATGAGCCAAGAGTCACAGGTCGGACCAAGGTCCTCCTCAACGAAGCTCTAAGTATGGCTCTTATCACAGGG AGTCCCATTCTGCTTCTTTTCTATTGGATCACGTACAACTTCTTCGACGCCTCGCTCTCGGCAAGCGGAGCAGCT CTGCTCCATGAAGGCGCAGCCACGTTCTTTTTGTCGCGCCTGCCATGGCCGACGATTTCTTCACTCAAGGGCTAC GGGTTTTGGGTTGTTTCTCAAGCTCTGCTATATCATTTCCTGCCAGGTGCTCTCCATCTTGCACCCCGGACCCCT GGCGGAAGACGGCTACTTTACAGATTGAACGGGCTTCTCGCCTGGTTCCTGACCGTTGCGGTTGCGGCTGCAGCC TCTTACTTTGGGACTTTGGACCCTACAGTTATCGCAAAACAATGGGGAGAAGGCTTAGCGACCGCCAACGTTTAC GCACTCACCTTGGTGGGCGTCTTCTATGTCAAGGCTCGCGTTAGACCAGACGAACCTGGAGACACGCTATTCACA GGCGAGTGCCGTACACCGTACGCTGCTTCCCCCAAGCTCACAAAAAGATGCGGTAGGGCATTTCTGGTATGACCT TTTCAACGGAGGCGAGCTTCACCCACGGACTGGCCGCATTTTCGACTGGAAGCACTTCAACTGCAGCCGAACAGG GGGCATTCTCGTCTGGACTTTGATGTGCGTCTCAGGTCTCTTTACCGTTCACTGGACGAAGATGTTGACACGGGG GGACGGAAGCGATCTATCGTTTGCTGCCCTTCAGCGTCAGCGTCATGGAAGCCTCACTGCCTCGATGATTCTCGC ATGTGCCTTTCGCATGATCGTCGTGGGGGAGTATTTTTATCTCGAGCACTGGTGAGCAAGCCCTTGCCCTGTGGA CCTTTTCTTCCTCTCTCAGAAAGCACGTCCGCAGGACTTTGACCGTGCAGATCAGGTTCTACGAAACGCTAGACG GCGCCCACGAGCGGTTCTCCTTCTACAGCATCTACGGCTTTGCTGCCATGATGCCGCAGCTATGGACCCTACAGA CGCAATACTTGGCGAAGCACCCAGTGGACCTGTCATACGGCGTCATTGCCGGCACTATCGCTTTGTTTGCTTTGG GGTGGATGCTGAACCACGATGCAAACCGACAGAAGAGCCTGTCGAGGCAAACTGCCGGACGGTGCGTCATCTGGG GAGCGCCCGCCCAGTTCCTCGAAGCGACCTATAAGACTGCCGACGGAAAGACGCACCGAACAGTCTTACTATGCT CCGGTAACACGCCGCCCGCAGTCCAGCCTCTGACAACAGCTGATACGTATAGCCAGGCTGGTGGGGGATGGTGCG GCATGCAAACTACGTCGGGTCACTCCTGTATACCTGGGCCTCATGCGTGTCATGCGGCTTCGATCACCTCTTACC GTACACTGAAGCAATCATCGTGA |