Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8515
Gene name
LocationContig_560:8972..9456
Strand-
Gene length (bp)484
Transcript length (bp)429
Coding sequence length (bp)429
Protein length (aa) 143

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10190 Tmemb_170 Putative transmembrane protein 170 9.2E-30 34 142

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q06537|YP153_YEAST Uncharacterized protein YPR153W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPR153W PE=2 SV=2 5 142 1.0E-21

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 44 66 22
2 81 103 22
3 116 138 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8515
MAYPNDPPPLYQTPRFPSLGVPPLSDKTPEKRHTIYRIEDAWRFTLVWTLVTYAVFHLGAVLVALVTHGWRKSSW
NYMWGVPIVYLVTAGLEALLAGTVVGLIVGAVYKAGYYEMNTWIPFTWGIINVLILIISSFSIQGGL*
Coding >Hirsu2|8515
ATGGCGTATCCAAACGACCCCCCGCCCCTGTACCAGACGCCGCGATTCCCATCGCTCGGCGTCCCGCCGCTGTCG
GACAAGACGCCGGAAAAGCGACATACCATCTACCGCATCGAGGACGCCTGGCGCTTCACGCTTGTCTGGACGCTC
GTCACGTATGCCGTCTTCCACCTGGGCGCCGTCCTCGTCGCCCTCGTCACGCACGGCTGGAGGAAGTCGTCATGG
AATTACATGTGGGGGGTGCCGATTGTTTACCTCGTCACCGCCGGCCTCGAGGCACTCCTCGCTGGCACCGTCGTC
GGCCTGATAGTCGGAGCCGTCTACAAGGCCGGATACTATGAGATGAATACGTGGATACCGTTTACGTGGGGGATC
ATCAACGTCTTGATCCTCATCATATCCTCCTTCTCCATCCAAGGCGGGCTTTGA
Transcript >Hirsu2|8515
ATGGCGTATCCAAACGACCCCCCGCCCCTGTACCAGACGCCGCGATTCCCATCGCTCGGCGTCCCGCCGCTGTCG
GACAAGACGCCGGAAAAGCGACATACCATCTACCGCATCGAGGACGCCTGGCGCTTCACGCTTGTCTGGACGCTC
GTCACGTATGCCGTCTTCCACCTGGGCGCCGTCCTCGTCGCCCTCGTCACGCACGGCTGGAGGAAGTCGTCATGG
AATTACATGTGGGGGGTGCCGATTGTTTACCTCGTCACCGCCGGCCTCGAGGCACTCCTCGCTGGCACCGTCGTC
GGCCTGATAGTCGGAGCCGTCTACAAGGCCGGATACTATGAGATGAATACGTGGATACCGTTTACGTGGGGGATC
ATCAACGTCTTGATCCTCATCATATCCTCCTTCTCCATCCAAGGCGGGCTTTGA
Gene >Hirsu2|8515
ATGGCGTATCCAAACGACCCCCCGCCCCTGTACCAGACGCCGCGATTCCCATCGCTCGGCGTCCCGCCGCTGTCG
GACAAGACGCCGGAAAAGCGACATACCATCTACCGCATCGAGGACGCCTGGCGCTTCACGCTTGTCTGGACGCTC
GTCACGTATGCCGTCTTCCACCTGGGCGCCGTCCTCGTCGCCCTCGTCACGCACGGCTGGAGGAAGTCGTCATGG
AATTACATGTGGGGGGTGCCGATTGTTTACCTCGTCACCGCCGGCCTCGAGGCACTCCTCGCTGGCACCGTCGTC
GGCCTGATGTTTGTTAGCGCCCCGGGAGAGAGGCTTGAAACGGCCGGCTGACTTGAACACCAGAGTCGGAGCCGT
CTACAAGGCCGGATACTATGAGATGAATACGTGGATACCGTTTACGTGGGGGATCATCAACGTCTTGATCCTCAT
CATATCCTCCTTCTCCATCCAAGGCGGGCTTTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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