© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|8515 |
| Gene name | |
| Location | Contig_560:8972..9456 |
| Strand | - |
| Gene length (bp) | 484 |
| Transcript length (bp) | 429 |
| Coding sequence length (bp) | 429 |
| Protein length (aa) | 143 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10190 | Tmemb_170 | Putative transmembrane protein 170 | 3.3E-28 | 35 | 142 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q06537|YP153_YEAST | Uncharacterized protein YPR153W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPR153W PE=2 SV=2 | 5 | 142 | 1.0E-21 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 44 | 66 | 22 |
| 2 | 81 | 103 | 22 |
| 3 | 116 | 138 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|8515 MAYPNDPPPLYQTPRFPSLGVPPLSDKTPEKRHTIYRIEDAWRFTLVWTLVTYAVFHLGAVLVALVTHGWRKSSW NYMWGVPIVYLVTAGLEALLAGTVVGLIVGAVYKAGYYEMNTWIPFTWGIINVLILIISSFSIQGGL* |
| Coding | >Hirsu2|8515 ATGGCGTATCCAAACGACCCCCCGCCCCTGTACCAGACGCCGCGATTCCCATCGCTCGGCGTCCCGCCGCTGTCG GACAAGACGCCGGAAAAGCGACATACCATCTACCGCATCGAGGACGCCTGGCGCTTCACGCTTGTCTGGACGCTC GTCACGTATGCCGTCTTCCACCTGGGCGCCGTCCTCGTCGCCCTCGTCACGCACGGCTGGAGGAAGTCGTCATGG AATTACATGTGGGGGGTGCCGATTGTTTACCTCGTCACCGCCGGCCTCGAGGCACTCCTCGCTGGCACCGTCGTC GGCCTGATAGTCGGAGCCGTCTACAAGGCCGGATACTATGAGATGAATACGTGGATACCGTTTACGTGGGGGATC ATCAACGTCTTGATCCTCATCATATCCTCCTTCTCCATCCAAGGCGGGCTTTGA |
| Transcript | >Hirsu2|8515 ATGGCGTATCCAAACGACCCCCCGCCCCTGTACCAGACGCCGCGATTCCCATCGCTCGGCGTCCCGCCGCTGTCG GACAAGACGCCGGAAAAGCGACATACCATCTACCGCATCGAGGACGCCTGGCGCTTCACGCTTGTCTGGACGCTC GTCACGTATGCCGTCTTCCACCTGGGCGCCGTCCTCGTCGCCCTCGTCACGCACGGCTGGAGGAAGTCGTCATGG AATTACATGTGGGGGGTGCCGATTGTTTACCTCGTCACCGCCGGCCTCGAGGCACTCCTCGCTGGCACCGTCGTC GGCCTGATAGTCGGAGCCGTCTACAAGGCCGGATACTATGAGATGAATACGTGGATACCGTTTACGTGGGGGATC ATCAACGTCTTGATCCTCATCATATCCTCCTTCTCCATCCAAGGCGGGCTTTGA |
| Gene | >Hirsu2|8515 ATGGCGTATCCAAACGACCCCCCGCCCCTGTACCAGACGCCGCGATTCCCATCGCTCGGCGTCCCGCCGCTGTCG GACAAGACGCCGGAAAAGCGACATACCATCTACCGCATCGAGGACGCCTGGCGCTTCACGCTTGTCTGGACGCTC GTCACGTATGCCGTCTTCCACCTGGGCGCCGTCCTCGTCGCCCTCGTCACGCACGGCTGGAGGAAGTCGTCATGG AATTACATGTGGGGGGTGCCGATTGTTTACCTCGTCACCGCCGGCCTCGAGGCACTCCTCGCTGGCACCGTCGTC GGCCTGATGTTTGTTAGCGCCCCGGGAGAGAGGCTTGAAACGGCCGGCTGACTTGAACACCAGAGTCGGAGCCGT CTACAAGGCCGGATACTATGAGATGAATACGTGGATACCGTTTACGTGGGGGATCATCAACGTCTTGATCCTCAT CATATCCTCCTTCTCCATCCAAGGCGGGCTTTGA |