Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8491
Gene name
LocationContig_559:14889..15567
Strand-
Gene length (bp)678
Transcript length (bp)468
Coding sequence length (bp)468
Protein length (aa) 156

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03650 MPC Mitochondrial pyruvate carriers 9.2E-48 41 147

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q09896|MPC2_SCHPO Probable mitochondrial pyruvate carrier 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mpc2 PE=3 SV=1 41 141 2.0E-35
sp|P53311|MPC3_YEAST Mitochondrial pyruvate carrier 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MPC3 PE=1 SV=1 41 127 1.0E-33
sp|P38857|MPC2_YEAST Mitochondrial pyruvate carrier 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MPC2 PE=1 SV=1 41 149 6.0E-32
sp|O01578|MPC2_CAEEL Probable mitochondrial pyruvate carrier 2 OS=Caenorhabditis elegans GN=F53F10.3 PE=3 SV=2 38 130 2.0E-28
sp|O49636|MPC4_ARATH Mitochondrial pyruvate carrier 4 OS=Arabidopsis thaliana GN=MPC4 PE=3 SV=1 41 143 8.0E-27
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Swissprot ID Swissprot Description Start End E-value
sp|Q09896|MPC2_SCHPO Probable mitochondrial pyruvate carrier 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mpc2 PE=3 SV=1 41 141 2.0E-35
sp|P53311|MPC3_YEAST Mitochondrial pyruvate carrier 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MPC3 PE=1 SV=1 41 127 1.0E-33
sp|P38857|MPC2_YEAST Mitochondrial pyruvate carrier 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MPC2 PE=1 SV=1 41 149 6.0E-32
sp|O01578|MPC2_CAEEL Probable mitochondrial pyruvate carrier 2 OS=Caenorhabditis elegans GN=F53F10.3 PE=3 SV=2 38 130 2.0E-28
sp|O49636|MPC4_ARATH Mitochondrial pyruvate carrier 4 OS=Arabidopsis thaliana GN=MPC4 PE=3 SV=1 41 143 8.0E-27
sp|O95563|MPC2_HUMAN Mitochondrial pyruvate carrier 2 OS=Homo sapiens GN=MPC2 PE=1 SV=1 38 127 3.0E-25
sp|P38718|MPC2_RAT Mitochondrial pyruvate carrier 2 OS=Rattus norvegicus GN=Mpc2 PE=2 SV=1 45 138 2.0E-24
sp|Q9D023|MPC2_MOUSE Mitochondrial pyruvate carrier 2 OS=Mus musculus GN=Mpc2 PE=1 SV=1 45 127 3.0E-24
sp|Q5R4Z3|MPC2_PONAB Mitochondrial pyruvate carrier 2 OS=Pongo abelii GN=MPC2 PE=2 SV=1 38 127 9.0E-24
sp|Q8L7H8|MPC2_ARATH Mitochondrial pyruvate carrier 2 OS=Arabidopsis thaliana GN=MPC2 PE=3 SV=1 41 126 2.0E-23
sp|Q8LD38|MPC3_ARATH Mitochondrial pyruvate carrier 3 OS=Arabidopsis thaliana GN=MPC3 PE=2 SV=1 41 131 8.0E-23
sp|Q949R9|MPC1_ARATH Mitochondrial pyruvate carrier 1 OS=Arabidopsis thaliana GN=MPC1 PE=3 SV=1 41 126 2.0E-12
sp|Q3ZCG2|MPC1_BOVIN Mitochondrial pyruvate carrier 1 OS=Bos taurus GN=MPC1 PE=1 SV=1 53 135 5.0E-12
sp|P63031|MPC1_RAT Mitochondrial pyruvate carrier 1 OS=Rattus norvegicus GN=Mpc1 PE=3 SV=1 53 135 5.0E-11
sp|P63030|MPC1_MOUSE Mitochondrial pyruvate carrier 1 OS=Mus musculus GN=Mpc1 PE=1 SV=1 53 135 5.0E-11
sp|Q9Y5U8|MPC1_HUMAN Mitochondrial pyruvate carrier 1 OS=Homo sapiens GN=MPC1 PE=1 SV=1 53 134 5.0E-11
sp|Q7KSC4|MPC1_DROME Mitochondrial pyruvate carrier 1 OS=Drosophila melanogaster GN=Mpc1 PE=3 SV=1 51 113 9.0E-06
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GO

GO Term Description Terminal node
GO:0006850 mitochondrial pyruvate transmembrane transport Yes
GO:0005743 mitochondrial inner membrane Yes
GO:0044446 intracellular organelle part No
GO:0006820 anion transport No
GO:0071702 organic substance transport No
GO:0044424 intracellular part No
GO:0051234 establishment of localization No
GO:0019866 organelle inner membrane No
GO:0015718 monocarboxylic acid transport No
GO:0015849 organic acid transport No
GO:0034220 ion transmembrane transport No
GO:0044444 cytoplasmic part No
GO:0044464 cell part No
GO:0055085 transmembrane transport No
GO:0051179 localization No
GO:0016020 membrane No
GO:0006839 mitochondrial transport No
GO:0015711 organic anion transport No
GO:0006811 ion transport No
GO:0031966 mitochondrial membrane No
GO:0006810 transport No
GO:0031090 organelle membrane No
GO:1903825 organic acid transmembrane transport No
GO:1990542 mitochondrial transmembrane transport No
GO:0008150 biological_process No
GO:0044429 mitochondrial part No
GO:1901475 pyruvate transmembrane transport No
GO:0098656 anion transmembrane transport No
GO:0006848 pyruvate transport No
GO:0046942 carboxylic acid transport No
GO:0044422 organelle part No
GO:1905039 carboxylic acid transmembrane transport No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 107 129 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8491
MVPAGIATRASRPLFRQAFRAQQQRAGRRWQSGSAANPGWFKRMWESEVGFKTVHFWAPVMKWALVLAGISDFAR
PAEKLSFTQNFALTCTGLIWTRWCLIIKPKNYLLAAVNFFLGIVGIIQLSRIGMHESSKKQGVAQAVDDAKEDLK
AKVKS*
Coding >Hirsu2|8491
ATGGTCCCCGCCGGCATCGCGACGCGCGCCTCGCGCCCGCTCTTCCGCCAGGCCTTCCGCGCCCAGCAGCAGCGC
GCCGGCAGGCGGTGGCAGAGCGGCAGCGCTGCCAATCCCGGCTGGTTCAAGCGCATGTGGGAGAGCGAGGTCGGC
TTCAAGACGGTGCACTTCTGGGCACCCGTCATGAAGTGGGCCCTCGTCCTGGCCGGCATCTCCGACTTCGCCCGG
CCGGCCGAGAAGCTGTCCTTCACCCAGAACTTCGCCCTGACCTGCACCGGCCTGATCTGGACGCGCTGGTGCCTC
ATCATCAAGCCCAAGAACTACCTCCTCGCCGCCGTCAACTTCTTCCTCGGCATCGTCGGCATCATCCAGCTCAGC
CGCATCGGCATGCACGAGTCGTCCAAGAAGCAGGGCGTGGCCCAGGCCGTCGACGACGCCAAGGAAGACCTCAAG
GCCAAGGTCAAGTCCTGA
Transcript >Hirsu2|8491
ATGGTCCCCGCCGGCATCGCGACGCGCGCCTCGCGCCCGCTCTTCCGCCAGGCCTTCCGCGCCCAGCAGCAGCGC
GCCGGCAGGCGGTGGCAGAGCGGCAGCGCTGCCAATCCCGGCTGGTTCAAGCGCATGTGGGAGAGCGAGGTCGGC
TTCAAGACGGTGCACTTCTGGGCACCCGTCATGAAGTGGGCCCTCGTCCTGGCCGGCATCTCCGACTTCGCCCGG
CCGGCCGAGAAGCTGTCCTTCACCCAGAACTTCGCCCTGACCTGCACCGGCCTGATCTGGACGCGCTGGTGCCTC
ATCATCAAGCCCAAGAACTACCTCCTCGCCGCCGTCAACTTCTTCCTCGGCATCGTCGGCATCATCCAGCTCAGC
CGCATCGGCATGCACGAGTCGTCCAAGAAGCAGGGCGTGGCCCAGGCCGTCGACGACGCCAAGGAAGACCTCAAG
GCCAAGGTCAAGTCCTGA
Gene >Hirsu2|8491
ATGGTCCCCGCCGGCATCGCGACGCGCGCCTCGCGCCCGCTCTTCCGCCAGGCCTTCCGCGCCCAGCAGCAGCGC
GCCGGCAGGCGGTGGCAGAGCGGCAGCGCTGCCAATCCCGGCTGGTTCAAGCGCATGTGGGAGAGCGAGGTCGGC
TTCAAGACGGTGCACTTCTGGTACGAAACCTCCCCCCAGCCCCCACGCCCCTCCCTCTATCGCTGACATCGCCCT
CCAGGGCACCCGTCATGAAGGTTCGTCTATGATTTTTTTTTTCTCCCTTGGCCAAGCCGCGTCTTCCGTTGCTGT
ATACCGGCTGACAAGCCCGTCCGGGGACACAGTGGGCCCTCGTCCTGGCCGGCATCTCCGACTTCGCCCGGCCGG
CCGAGAAGCTGTCCTTCACCCAGAACTTCGCCCTGACCTGCACCGGCCTGATCTGGACGCGCTGGTGCCTCATCA
TCAAGCCCAAGAACTACCTGTGCGTCGTCCCCCCCCCCCCCTCTCTCTCCGTCTTCCCCGCTGACACACACGCGC
ACGCCCAGCCTCGCCGCCGTCAACTTCTTCCTCGGCATCGTCGGCATCATCCAGCTCAGCCGCATCGGCATGCAC
GAGTCGTCCAAGAAGCAGGGCGTGGCCCAGGCCGTCGACGACGCCAAGGAAGACCTCAAGGCCAAGGTCAAGTCC
TGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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