© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|8491 |
| Gene name | |
| Location | Contig_559:14889..15567 |
| Strand | - |
| Gene length (bp) | 678 |
| Transcript length (bp) | 468 |
| Coding sequence length (bp) | 468 |
| Protein length (aa) | 156 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03650 | MPC | Mitochondrial pyruvate carriers | 2.8E-48 | 41 | 147 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q09896|MPC2_SCHPO | Probable mitochondrial pyruvate carrier 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mpc2 PE=3 SV=1 | 41 | 141 | 2.0E-35 |
| sp|P53311|MPC3_YEAST | Mitochondrial pyruvate carrier 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MPC3 PE=1 SV=1 | 41 | 127 | 1.0E-33 |
| sp|P38857|MPC2_YEAST | Mitochondrial pyruvate carrier 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MPC2 PE=1 SV=1 | 41 | 149 | 6.0E-32 |
| sp|O01578|MPC2_CAEEL | Probable mitochondrial pyruvate carrier 2 OS=Caenorhabditis elegans GN=F53F10.3 PE=3 SV=2 | 38 | 130 | 2.0E-28 |
| sp|O49636|MPC4_ARATH | Mitochondrial pyruvate carrier 4 OS=Arabidopsis thaliana GN=MPC4 PE=3 SV=1 | 41 | 143 | 8.0E-27 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q09896|MPC2_SCHPO | Probable mitochondrial pyruvate carrier 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mpc2 PE=3 SV=1 | 41 | 141 | 2.0E-35 |
| sp|P53311|MPC3_YEAST | Mitochondrial pyruvate carrier 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MPC3 PE=1 SV=1 | 41 | 127 | 1.0E-33 |
| sp|P38857|MPC2_YEAST | Mitochondrial pyruvate carrier 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MPC2 PE=1 SV=1 | 41 | 149 | 6.0E-32 |
| sp|O01578|MPC2_CAEEL | Probable mitochondrial pyruvate carrier 2 OS=Caenorhabditis elegans GN=F53F10.3 PE=3 SV=2 | 38 | 130 | 2.0E-28 |
| sp|O49636|MPC4_ARATH | Mitochondrial pyruvate carrier 4 OS=Arabidopsis thaliana GN=MPC4 PE=3 SV=1 | 41 | 143 | 8.0E-27 |
| sp|O95563|MPC2_HUMAN | Mitochondrial pyruvate carrier 2 OS=Homo sapiens GN=MPC2 PE=1 SV=1 | 38 | 127 | 3.0E-25 |
| sp|P38718|MPC2_RAT | Mitochondrial pyruvate carrier 2 OS=Rattus norvegicus GN=Mpc2 PE=2 SV=1 | 45 | 138 | 2.0E-24 |
| sp|Q9D023|MPC2_MOUSE | Mitochondrial pyruvate carrier 2 OS=Mus musculus GN=Mpc2 PE=1 SV=1 | 45 | 127 | 3.0E-24 |
| sp|Q5R4Z3|MPC2_PONAB | Mitochondrial pyruvate carrier 2 OS=Pongo abelii GN=MPC2 PE=2 SV=1 | 38 | 127 | 9.0E-24 |
| sp|Q8L7H8|MPC2_ARATH | Mitochondrial pyruvate carrier 2 OS=Arabidopsis thaliana GN=MPC2 PE=3 SV=1 | 41 | 126 | 2.0E-23 |
| sp|Q8LD38|MPC3_ARATH | Mitochondrial pyruvate carrier 3 OS=Arabidopsis thaliana GN=MPC3 PE=2 SV=1 | 41 | 131 | 8.0E-23 |
| sp|Q949R9|MPC1_ARATH | Mitochondrial pyruvate carrier 1 OS=Arabidopsis thaliana GN=MPC1 PE=3 SV=1 | 41 | 126 | 2.0E-12 |
| sp|Q3ZCG2|MPC1_BOVIN | Mitochondrial pyruvate carrier 1 OS=Bos taurus GN=MPC1 PE=1 SV=1 | 53 | 135 | 5.0E-12 |
| sp|P63031|MPC1_RAT | Mitochondrial pyruvate carrier 1 OS=Rattus norvegicus GN=Mpc1 PE=3 SV=1 | 53 | 135 | 5.0E-11 |
| sp|P63030|MPC1_MOUSE | Mitochondrial pyruvate carrier 1 OS=Mus musculus GN=Mpc1 PE=1 SV=1 | 53 | 135 | 5.0E-11 |
| sp|Q9Y5U8|MPC1_HUMAN | Mitochondrial pyruvate carrier 1 OS=Homo sapiens GN=MPC1 PE=1 SV=1 | 53 | 134 | 5.0E-11 |
| sp|Q7KSC4|MPC1_DROME | Mitochondrial pyruvate carrier 1 OS=Drosophila melanogaster GN=Mpc1 PE=3 SV=1 | 51 | 113 | 9.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005743 | mitochondrial inner membrane | Yes |
| GO:0006850 | mitochondrial pyruvate transmembrane transport | Yes |
| GO:0031090 | organelle membrane | No |
| GO:0051179 | localization | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0071702 | organic substance transport | No |
| GO:0009987 | cellular process | No |
| GO:0006848 | pyruvate transport | No |
| GO:0015711 | organic anion transport | No |
| GO:0031966 | mitochondrial membrane | No |
| GO:1903825 | organic acid transmembrane transport | No |
| GO:0016020 | membrane | No |
| GO:0046942 | carboxylic acid transport | No |
| GO:1901475 | pyruvate transmembrane transport | No |
| GO:1905039 | carboxylic acid transmembrane transport | No |
| GO:0006811 | ion transport | No |
| GO:0015718 | monocarboxylic acid transport | No |
| GO:1990542 | mitochondrial transmembrane transport | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0006810 | transport | No |
| GO:0034220 | ion transmembrane transport | No |
| GO:0019866 | organelle inner membrane | No |
| GO:0005575 | cellular_component | No |
| GO:0098656 | anion transmembrane transport | No |
| GO:0015849 | organic acid transport | No |
| GO:0055085 | transmembrane transport | No |
| GO:0006820 | anion transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 107 | 129 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|8491 MVPAGIATRASRPLFRQAFRAQQQRAGRRWQSGSAANPGWFKRMWESEVGFKTVHFWAPVMKWALVLAGISDFAR PAEKLSFTQNFALTCTGLIWTRWCLIIKPKNYLLAAVNFFLGIVGIIQLSRIGMHESSKKQGVAQAVDDAKEDLK AKVKS* |
| Coding | >Hirsu2|8491 ATGGTCCCCGCCGGCATCGCGACGCGCGCCTCGCGCCCGCTCTTCCGCCAGGCCTTCCGCGCCCAGCAGCAGCGC GCCGGCAGGCGGTGGCAGAGCGGCAGCGCTGCCAATCCCGGCTGGTTCAAGCGCATGTGGGAGAGCGAGGTCGGC TTCAAGACGGTGCACTTCTGGGCACCCGTCATGAAGTGGGCCCTCGTCCTGGCCGGCATCTCCGACTTCGCCCGG CCGGCCGAGAAGCTGTCCTTCACCCAGAACTTCGCCCTGACCTGCACCGGCCTGATCTGGACGCGCTGGTGCCTC ATCATCAAGCCCAAGAACTACCTCCTCGCCGCCGTCAACTTCTTCCTCGGCATCGTCGGCATCATCCAGCTCAGC CGCATCGGCATGCACGAGTCGTCCAAGAAGCAGGGCGTGGCCCAGGCCGTCGACGACGCCAAGGAAGACCTCAAG GCCAAGGTCAAGTCCTGA |
| Transcript | >Hirsu2|8491 ATGGTCCCCGCCGGCATCGCGACGCGCGCCTCGCGCCCGCTCTTCCGCCAGGCCTTCCGCGCCCAGCAGCAGCGC GCCGGCAGGCGGTGGCAGAGCGGCAGCGCTGCCAATCCCGGCTGGTTCAAGCGCATGTGGGAGAGCGAGGTCGGC TTCAAGACGGTGCACTTCTGGGCACCCGTCATGAAGTGGGCCCTCGTCCTGGCCGGCATCTCCGACTTCGCCCGG CCGGCCGAGAAGCTGTCCTTCACCCAGAACTTCGCCCTGACCTGCACCGGCCTGATCTGGACGCGCTGGTGCCTC ATCATCAAGCCCAAGAACTACCTCCTCGCCGCCGTCAACTTCTTCCTCGGCATCGTCGGCATCATCCAGCTCAGC CGCATCGGCATGCACGAGTCGTCCAAGAAGCAGGGCGTGGCCCAGGCCGTCGACGACGCCAAGGAAGACCTCAAG GCCAAGGTCAAGTCCTGA |
| Gene | >Hirsu2|8491 ATGGTCCCCGCCGGCATCGCGACGCGCGCCTCGCGCCCGCTCTTCCGCCAGGCCTTCCGCGCCCAGCAGCAGCGC GCCGGCAGGCGGTGGCAGAGCGGCAGCGCTGCCAATCCCGGCTGGTTCAAGCGCATGTGGGAGAGCGAGGTCGGC TTCAAGACGGTGCACTTCTGGTACGAAACCTCCCCCCAGCCCCCACGCCCCTCCCTCTATCGCTGACATCGCCCT CCAGGGCACCCGTCATGAAGGTTCGTCTATGATTTTTTTTTTCTCCCTTGGCCAAGCCGCGTCTTCCGTTGCTGT ATACCGGCTGACAAGCCCGTCCGGGGACACAGTGGGCCCTCGTCCTGGCCGGCATCTCCGACTTCGCCCGGCCGG CCGAGAAGCTGTCCTTCACCCAGAACTTCGCCCTGACCTGCACCGGCCTGATCTGGACGCGCTGGTGCCTCATCA TCAAGCCCAAGAACTACCTGTGCGTCGTCCCCCCCCCCCCCTCTCTCTCCGTCTTCCCCGCTGACACACACGCGC ACGCCCAGCCTCGCCGCCGTCAACTTCTTCCTCGGCATCGTCGGCATCATCCAGCTCAGCCGCATCGGCATGCAC GAGTCGTCCAAGAAGCAGGGCGTGGCCCAGGCCGTCGACGACGCCAAGGAAGACCTCAAGGCCAAGGTCAAGTCC TGA |