Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8480
Gene name
LocationContig_557:10133..10817
Strand+
Gene length (bp)684
Transcript length (bp)327
Coding sequence length (bp)327
Protein length (aa) 109

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14765 PS-DH Polyketide synthase dehydratase 3.9E-09 7 95

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 34 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8480
MRSGKVVWNEFTFYSKPGGEQVVEHASGLCRIVSHGDTPTATEETAVADLHGVDASSGAPPVDGVHASHSAHYSA
WRNAGFDFGPTFRGLQGASVSRLGNGPSCNFES*
Coding >Hirsu2|8480
ATGAGGTCAGGCAAGGTCGTTTGGAACGAATTCACCTTCTATAGCAAACCGGGCGGAGAACAGGTCGTCGAGCAT
GCCTCGGGCCTGTGCAGGATCGTGAGCCACGGCGACACGCCGACAGCAACCGAAGAGACTGCTGTCGCCGACCTC
CACGGTGTGGATGCCAGCTCTGGCGCGCCGCCCGTCGATGGCGTTCACGCCTCACACTCTGCTCACTACAGCGCT
TGGCGCAACGCCGGCTTTGACTTCGGCCCTACCTTTCGTGGTCTCCAAGGCGCCTCGGTTTCCCGGCTCGGGAAT
GGGCCATCGTGCAATTTCGAGAGCTGA
Transcript >Hirsu2|8480
ATGAGGTCAGGCAAGGTCGTTTGGAACGAATTCACCTTCTATAGCAAACCGGGCGGAGAACAGGTCGTCGAGCAT
GCCTCGGGCCTGTGCAGGATCGTGAGCCACGGCGACACGCCGACAGCAACCGAAGAGACTGCTGTCGCCGACCTC
CACGGTGTGGATGCCAGCTCTGGCGCGCCGCCCGTCGATGGCGTTCACGCCTCACACTCTGCTCACTACAGCGCT
TGGCGCAACGCCGGCTTTGACTTCGGCCCTACCTTTCGTGGTCTCCAAGGCGCCTCGGTTTCCCGGCTCGGGAAT
GGGCCATCGTGCAATTTCGAGAGCTGA
Gene >Hirsu2|8480
ATGAGGTCAGGCAAGGTCGTTTGGAACGAATTCACCTTCTATAGCAAACCGGGCGGAGAACAGGTCGTCGAGCAT
GCCTCGGGCCTGTGCAGGATCGTGAGCCACGGCGACACGCCGACAGCAACCGAAGAGACTGCTGTCGCCGACCTC
CACGGTGTGGATGCCAGCTCTGGCGCGCCGCCCGTCGATGGCGTTCACGCCTCACACTCTGCTCACTACAGCGCT
TGGCGCAACGCCGGCTTTGACTTCGGTGAGCGGCTTCTGCTTACGGGACGAGCGCATAGGCCCCTTCTGACCCTT
GTTTCCAATTTCCAGGCCCTACCTTTCGTGGTCTCCAAGGCGCCTCGGTTTCCCGGCTCGGGAATGGGCCATCGT
GCAATTTCGAGGTTGGTATCCAAGATACCAAACTTCTGTCATCCAATCCCTTCGAAACCGACTACCTGATCCATC
CTGGAACGTTGGACGCCTGCATTCAAGCCCTTTGGCATGTCTTTTTTGACAGTCCAGATTCGGCCTTTGTCCCGA
CGGGGATAGCCAACGGGATTGTCCGGGTCGATGCTCTTCGCAAGGCCGGGTCAGTTCTCCGAGGAAATGTCGACT
TCGTAGGCCGAAGCCGGAGACGTGCTTCGGCATCCGTCTTCGTCAGAAGCGCTGACTCGCCAGGGCCTCACGCCA
TAGAGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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