Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8457
Gene name
LocationContig_553:5854..6604
Strand+
Gene length (bp)750
Transcript length (bp)669
Coding sequence length (bp)669
Protein length (aa) 223

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF17254 DUF5321 Family of unknown function (DUF5321) 8.8E-56 59 201

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 45 0.5

Transmembrane Domains

Domain # Start End Length
1 95 117 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8457
MPPVSLNFDEPRKLTWLRQRKTLSATFIMVLLRLIARQNGLARASAMAGWRAGLRHSSTAPATVIDAGFWRSLIP
KPLRKENREKRAQGQSKEWNPATYFIAMFVLVGSMSIQMIALRKQTDTYARQSRVRLELLREVVERIRNGEEVDV
EKVLGTGDEQKEADWEEVLRAINRDEASRKRTRVEEKPKQPDSRETKDMHSSSGSPEPPAAKSKPASLGSFF*
Coding >Hirsu2|8457
ATGCCCCCAGTCTCACTCAACTTTGACGAGCCCAGGAAGCTGACGTGGCTCAGGCAGAGGAAGACGCTGTCTGCC
ACCTTCATCATGGTCTTATTGAGATTAATCGCTCGGCAAAACGGACTCGCAAGGGCTTCTGCTATGGCAGGATGG
CGGGCCGGCCTTCGACATTCCAGCACGGCTCCTGCGACCGTCATCGACGCCGGGTTTTGGAGATCGCTGATACCC
AAACCGTTGCGCAAGGAAAACCGCGAGAAGAGAGCTCAAGGTCAATCGAAGGAATGGAATCCAGCCACCTACTTC
ATTGCCATGTTCGTTCTTGTCGGATCCATGTCTATACAGATGATTGCCCTGCGGAAGCAGACGGACACGTACGCG
CGCCAGTCGCGTGTTAGACTTGAGCTACTGCGGGAAGTGGTCGAGAGGATACGGAACGGGGAGGAAGTCGACGTC
GAAAAAGTGTTGGGTACCGGCGATGAGCAGAAGGAGGCAGACTGGGAAGAGGTGCTACGAGCCATTAATCGAGAC
GAGGCATCGCGCAAGCGGACGAGAGTAGAGGAAAAACCGAAGCAACCAGACTCACGCGAAACGAAGGATATGCAC
TCTTCGTCCGGCTCACCCGAACCGCCAGCCGCAAAATCAAAGCCGGCCAGTCTGGGAAGCTTCTTCTGA
Transcript >Hirsu2|8457
ATGCCCCCAGTCTCACTCAACTTTGACGAGCCCAGGAAGCTGACGTGGCTCAGGCAGAGGAAGACGCTGTCTGCC
ACCTTCATCATGGTCTTATTGAGATTAATCGCTCGGCAAAACGGACTCGCAAGGGCTTCTGCTATGGCAGGATGG
CGGGCCGGCCTTCGACATTCCAGCACGGCTCCTGCGACCGTCATCGACGCCGGGTTTTGGAGATCGCTGATACCC
AAACCGTTGCGCAAGGAAAACCGCGAGAAGAGAGCTCAAGGTCAATCGAAGGAATGGAATCCAGCCACCTACTTC
ATTGCCATGTTCGTTCTTGTCGGATCCATGTCTATACAGATGATTGCCCTGCGGAAGCAGACGGACACGTACGCG
CGCCAGTCGCGTGTTAGACTTGAGCTACTGCGGGAAGTGGTCGAGAGGATACGGAACGGGGAGGAAGTCGACGTC
GAAAAAGTGTTGGGTACCGGCGATGAGCAGAAGGAGGCAGACTGGGAAGAGGTGCTACGAGCCATTAATCGAGAC
GAGGCATCGCGCAAGCGGACGAGAGTAGAGGAAAAACCGAAGCAACCAGACTCACGCGAAACGAAGGATATGCAC
TCTTCGTCCGGCTCACCCGAACCGCCAGCCGCAAAATCAAAGCCGGCCAGTCTGGGAAGCTTCTTCTGA
Gene >Hirsu2|8457
ATGCCCCCAGTCTCACTCAACTTTGACGAGCCCAGGAAGCTGACGTGGCTCAGGCAGAGGAAGACGCTGTCTGCC
ACCTTCATCATGGTCTTATTGAGATTAATCGCTCGGCAAAACGGACTCGCAAGGGCTTCTGCTATGGCAGGATGG
CGGGCCGGCCTTCGACATTCCAGCACGGCTCCTGCGACCGTCATCGACGCCGGGTTTTGGAGATCGCTGATACCC
AAACCGTTGCGCAAGGAAAACCGCGAGAAGAGAGCTCAAGGTCAATCGAAGGAATGGAATCCAGCCACCTACTTC
ATTGCCATGTTCGTTCTTGTCGGATCCATGTCTATACAGATGATTGCCCTGCGGAAGCAGACGGACACGTACGCG
CGCCAGTCGCGTGTTAGACTTGAGCTACTGCGGGAAGTGGTCGAGAGGATACGGAACGGGGAGGAAGTCGACGTC
GAAAAAGTGTTGGGTACCGGCGATGAGCAGAAGGAGGCAGACTGGGAAGAGGGTAAGTTGTTTCCTGAGCAATGT
TTGGGGTGGAAAGGGAGAGCCAAGCCGGAGTGACATTCTTGCTGAGACCGACTGGCAGTGCTACGAGCCATTAAT
CGAGACGAGGCATCGCGCAAGCGGACGAGAGTAGAGGAAAAACCGAAGCAACCAGACTCACGCGAAACGAAGGAT
ATGCACTCTTCGTCCGGCTCACCCGAACCGCCAGCCGCAAAATCAAAGCCGGCCAGTCTGGGAAGCTTCTTCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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