Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8454
Gene name
LocationContig_552:12617..13472
Strand-
Gene length (bp)855
Transcript length (bp)777
Coding sequence length (bp)777
Protein length (aa) 259

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12900 Pyridox_ox_2 Pyridoxamine 5'-phosphate oxidase 4.0E-36 28 187

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 51 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8454
MGRYELEYPKDATNAVKRHGERGIYALEKIHGLVNGSQMVHVSFNPPGSAFPVTLPMIGQMGSFDRPSASLGDPL
DLYLHGYVSSRLFGATPRAAGAGGVPVCVAASHVDGLVLALSPFSHSYNYRSAVLFGHAALVDAPDEKLYAMRLI
TDAVVPGRWANTRQPPTAAEMQSTSILRVRIVSGSAKFRHGGASDDRHDLENEDALAAVWTGVVPVYSTMGDPIP
GPYNRVDLPAYASEFFSDFRRENEERSIAAAKE*
Coding >Hirsu2|8454
ATGGGCCGCTACGAGCTTGAATACCCCAAGGACGCAACCAATGCCGTCAAGCGCCACGGCGAGCGAGGCATATAC
GCCCTCGAGAAGATCCACGGGCTGGTCAACGGGTCGCAGATGGTTCACGTCTCCTTCAACCCGCCGGGCTCGGCC
TTCCCCGTCACCCTGCCAATGATCGGCCAGATGGGCTCCTTTGACCGGCCCAGCGCCTCGCTCGGCGACCCGCTC
GACCTCTACCTGCACGGCTACGTCTCGTCGCGGCTGTTCGGCGCCACCCCGCGCGCGGCCGGCGCCGGCGGCGTC
CCCGTCTGCGTCGCGGCCTCGCACGTCGACGGCCTCGTCCTCGCCCTCTCGCCCTTCAGCCACAGCTACAACTAC
CGCTCCGCCGTCCTCTTCGGCCACGCAGCCCTCGTCGACGCCCCGGACGAGAAGCTGTACGCGATGCGGCTCATC
ACCGACGCCGTCGTCCCCGGCCGCTGGGCCAACACCCGTCAGCCCCCGACCGCGGCCGAGATGCAGAGCACCAGC
ATCCTCCGCGTCCGCATCGTCTCCGGCAGCGCAAAGTTCCGCCACGGCGGCGCCAGCGACGACCGCCACGACCTC
GAAAACGAGGACGCCTTGGCCGCCGTCTGGACCGGCGTCGTGCCCGTCTACTCCACCATGGGCGACCCCATCCCG
GGCCCCTATAACAGGGTCGACCTCCCCGCCTACGCGTCCGAGTTCTTTAGCGACTTTCGTCGCGAGAACGAGGAG
CGCAGCATTGCCGCGGCCAAGGAGTAG
Transcript >Hirsu2|8454
ATGGGCCGCTACGAGCTTGAATACCCCAAGGACGCAACCAATGCCGTCAAGCGCCACGGCGAGCGAGGCATATAC
GCCCTCGAGAAGATCCACGGGCTGGTCAACGGGTCGCAGATGGTTCACGTCTCCTTCAACCCGCCGGGCTCGGCC
TTCCCCGTCACCCTGCCAATGATCGGCCAGATGGGCTCCTTTGACCGGCCCAGCGCCTCGCTCGGCGACCCGCTC
GACCTCTACCTGCACGGCTACGTCTCGTCGCGGCTGTTCGGCGCCACCCCGCGCGCGGCCGGCGCCGGCGGCGTC
CCCGTCTGCGTCGCGGCCTCGCACGTCGACGGCCTCGTCCTCGCCCTCTCGCCCTTCAGCCACAGCTACAACTAC
CGCTCCGCCGTCCTCTTCGGCCACGCAGCCCTCGTCGACGCCCCGGACGAGAAGCTGTACGCGATGCGGCTCATC
ACCGACGCCGTCGTCCCCGGCCGCTGGGCCAACACCCGTCAGCCCCCGACCGCGGCCGAGATGCAGAGCACCAGC
ATCCTCCGCGTCCGCATCGTCTCCGGCAGCGCAAAGTTCCGCCACGGCGGCGCCAGCGACGACCGCCACGACCTC
GAAAACGAGGACGCCTTGGCCGCCGTCTGGACCGGCGTCGTGCCCGTCTACTCCACCATGGGCGACCCCATCCCG
GGCCCCTATAACAGGGTCGACCTCCCCGCCTACGCGTCCGAGTTCTTTAGCGACTTTCGTCGCGAGAACGAGGAG
CGCAGCATTGCCGCGGCCAAGGAGTAG
Gene >Hirsu2|8454
ATGGGCCGCTACGAGCTTGAATACCCCAAGGACGCAACCAATGCCGTCAAGCGCCACGGCGAGCGAGGTGCGCCC
CCAGCCCCGACATGAAGCCATGGATCGCCTCGCCAGGCCCGCTGACGCGCGAGAGCCGTCTCTCGACCAGGCATA
TACGCCCTCGAGAAGATCCACGGGCTGGTCAACGGGTCGCAGATGGTTCACGTCTCCTTCAACCCGCCGGGCTCG
GCCTTCCCCGTCACCCTGCCAATGATCGGCCAGATGGGCTCCTTTGACCGGCCCAGCGCCTCGCTCGGCGACCCG
CTCGACCTCTACCTGCACGGCTACGTCTCGTCGCGGCTGTTCGGCGCCACCCCGCGCGCGGCCGGCGCCGGCGGC
GTCCCCGTCTGCGTCGCGGCCTCGCACGTCGACGGCCTCGTCCTCGCCCTCTCGCCCTTCAGCCACAGCTACAAC
TACCGCTCCGCCGTCCTCTTCGGCCACGCAGCCCTCGTCGACGCCCCGGACGAGAAGCTGTACGCGATGCGGCTC
ATCACCGACGCCGTCGTCCCCGGCCGCTGGGCCAACACCCGTCAGCCCCCGACCGCGGCCGAGATGCAGAGCACC
AGCATCCTCCGCGTCCGCATCGTCTCCGGCAGCGCAAAGTTCCGCCACGGCGGCGCCAGCGACGACCGCCACGAC
CTCGAAAACGAGGACGCCTTGGCCGCCGTCTGGACCGGCGTCGTGCCCGTCTACTCCACCATGGGCGACCCCATC
CCGGGCCCCTATAACAGGGTCGACCTCCCCGCCTACGCGTCCGAGTTCTTTAGCGACTTTCGTCGCGAGAACGAG
GAGCGCAGCATTGCCGCGGCCAAGGAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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