© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|8452 |
| Gene name | |
| Location | Contig_552:5093..6102 |
| Strand | - |
| Gene length (bp) | 1009 |
| Transcript length (bp) | 735 |
| Coding sequence length (bp) | 735 |
| Protein length (aa) | 245 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 26 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 35 | 22 |
| 2 | 45 | 67 | 22 |
| 3 | 109 | 131 | 22 |
| 4 | 146 | 168 | 22 |
| 5 | 189 | 211 | 22 |
| 6 | 216 | 238 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|8452 MASPGDEQALAATFLFAIVAAAAVATSFLYFRGGVSSLLRDGPRLVLIGFLATSFLWALVGFIATFLRRAESSGC QATVAFAAVFDQLARMMLEEFIFWAMKCDLQASLAIILPQVVFLVRFILGGVFVGVQRPQFKPVCVGITISTPLA IVVLVADAVIVVMLLVRASSVGIFRDIQEKTALFARSRALLLVTLGLVIWISMSVPMILGMETFDIIVRTVLPAI GSLVVLALIAVLRSTPLEA* |
| Coding | >Hirsu2|8452 ATGGCGAGTCCGGGCGACGAGCAGGCCCTTGCCGCCACCTTTCTCTTTGCCATCGTTGCCGCTGCCGCTGTCGCG ACATCTTTCTTATACTTTAGAGGCGGCGTCTCATCACTCCTCCGAGATGGGCCGAGGCTGGTCCTCATTGGTTTC CTCGCGACCTCCTTCCTTTGGGCTCTAGTAGGCTTCATCGCCACCTTCCTCAGGAGGGCCGAGTCCTCGGGCTGC CAAGCCACCGTCGCCTTCGCCGCCGTCTTCGATCAGTTGGCCCGAATGATGCTCGAGGAGTTCATCTTCTGGGCC ATGAAATGCGATCTTCAGGCCTCGCTGGCCATCATCTTGCCCCAGGTCGTCTTTCTCGTGCGCTTCATCTTGGGC GGAGTCTTCGTCGGCGTTCAAAGACCACAGTTCAAGCCCGTCTGCGTCGGCATCACCATTTCCACGCCCTTGGCA ATCGTCGTTCTCGTCGCCGACGCTGTCATCGTCGTCATGTTATTGGTCCGCGCTTCTTCGGTCGGCATTTTTCGG GACATACAGGAAAAGACGGCCCTCTTCGCCCGCAGCAGGGCACTGCTGCTGGTGACGCTGGGGCTTGTCATTTGG ATTTCTATGAGCGTACCCATGATTTTGGGCATGGAAACATTCGACATAATTGTTCGGACCGTGCTTCCTGCTATT GGCTCGCTTGTCGTTCTTGCCCTCATCGCAGTTCTCAGGAGCACTCCTCTCGAGGCGTGA |
| Transcript | >Hirsu2|8452 ATGGCGAGTCCGGGCGACGAGCAGGCCCTTGCCGCCACCTTTCTCTTTGCCATCGTTGCCGCTGCCGCTGTCGCG ACATCTTTCTTATACTTTAGAGGCGGCGTCTCATCACTCCTCCGAGATGGGCCGAGGCTGGTCCTCATTGGTTTC CTCGCGACCTCCTTCCTTTGGGCTCTAGTAGGCTTCATCGCCACCTTCCTCAGGAGGGCCGAGTCCTCGGGCTGC CAAGCCACCGTCGCCTTCGCCGCCGTCTTCGATCAGTTGGCCCGAATGATGCTCGAGGAGTTCATCTTCTGGGCC ATGAAATGCGATCTTCAGGCCTCGCTGGCCATCATCTTGCCCCAGGTCGTCTTTCTCGTGCGCTTCATCTTGGGC GGAGTCTTCGTCGGCGTTCAAAGACCACAGTTCAAGCCCGTCTGCGTCGGCATCACCATTTCCACGCCCTTGGCA ATCGTCGTTCTCGTCGCCGACGCTGTCATCGTCGTCATGTTATTGGTCCGCGCTTCTTCGGTCGGCATTTTTCGG GACATACAGGAAAAGACGGCCCTCTTCGCCCGCAGCAGGGCACTGCTGCTGGTGACGCTGGGGCTTGTCATTTGG ATTTCTATGAGCGTACCCATGATTTTGGGCATGGAAACATTCGACATAATTGTTCGGACCGTGCTTCCTGCTATT GGCTCGCTTGTCGTTCTTGCCCTCATCGCAGTTCTCAGGAGCACTCCTCTCGAGGCGTGA |
| Gene | >Hirsu2|8452 ATGGCGAGTCCGGGCGACGAGCAGGCCCTTGCCGCCACCTTTCTCTTGTCAGTGTCCACGCCGATGGATGAATGG GCTCAAAGAAGTCGACTTTGCTAACGTCACCGTCGCCATCAGTGCCATCGTTGCCGCTGCCGCTGTCGCGACATC TTTCTTATACTTTAGAGGCGGCGTCTCATCACTCCTCCGAGATGGGCCGAGGCTGGTCCTCATTGGTTTCCTCGC GACCTCCTTCCTTTGGGCTCTAGTAGGCTTCATCGCCACCTTCCTCAGGAGGGCCGAGTCCTCGGGCTGCCAAGC CACCGTCGCCTTCGCCGCCGTCTTCGATCAGTTGGCCCGAATGATGCTCGAGGAGTTCATCTTCTGGGCCATGAA ATGCGATCTTCAGGCCTCGCTGGCCATCATCTTGCCCCAGGTCGTCTTTCTCGTGCGCTTCATCTTGGGCGGAGT CTTCGTCGGCGTTCAAAGACCACAGTTCAAGCCCGTCTGCGTCGGCATCACCATTTCCACGCCCTTGGCAATCGT CGTTCTCGTCGCCGACGCTGTCATCGTCGTCATGTTATTGGTCCGCGCTTCTTCGGTCGGCATTTTTCGGGACAT ACAGGAAAAGACGGCCCTCTTCGCCCGCAGCAGGGCACTGCTGCTGGTGACGCTGGGGCTTGTCATTTGGATTTC TGTGAGTTGTTTCAAGGCTCTCGGCTCCGCCCCCGAATTCTTCCGTGTACAAGGATTTGTCTAACTCTGCGGCTG CAGATGAGCGTACCCATGATTTTGGGCATGGAAACATTCGACATAATTGTTCGGACCGTGCTTCCTGCTATTGGC TCGCTTGTCGTTCTTGGTATGTGTCTGAGTTGAGCCCTCCCTGCCAGTGGCTGGTGTTGATCTCTCCCCGCAGCC CTCATCGCAGTTCTCAGGAGCAGTCTCAGGAGCTCTGAGACAAGCAGTTCAAAGTCAAATGGCCCGCAGATATCC GATAGCCCCGATCAAAGCTCCTCTCGAGGCGTGA |