Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8452
Gene name
LocationContig_552:5093..6102
Strand-
Gene length (bp)1009
Transcript length (bp)735
Coding sequence length (bp)735
Protein length (aa) 245

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 26 0.5

Transmembrane Domains

Domain # Start End Length
1 13 35 22
2 45 67 22
3 109 131 22
4 146 168 22
5 189 211 22
6 216 238 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8452
MASPGDEQALAATFLFAIVAAAAVATSFLYFRGGVSSLLRDGPRLVLIGFLATSFLWALVGFIATFLRRAESSGC
QATVAFAAVFDQLARMMLEEFIFWAMKCDLQASLAIILPQVVFLVRFILGGVFVGVQRPQFKPVCVGITISTPLA
IVVLVADAVIVVMLLVRASSVGIFRDIQEKTALFARSRALLLVTLGLVIWISMSVPMILGMETFDIIVRTVLPAI
GSLVVLALIAVLRSTPLEA*
Coding >Hirsu2|8452
ATGGCGAGTCCGGGCGACGAGCAGGCCCTTGCCGCCACCTTTCTCTTTGCCATCGTTGCCGCTGCCGCTGTCGCG
ACATCTTTCTTATACTTTAGAGGCGGCGTCTCATCACTCCTCCGAGATGGGCCGAGGCTGGTCCTCATTGGTTTC
CTCGCGACCTCCTTCCTTTGGGCTCTAGTAGGCTTCATCGCCACCTTCCTCAGGAGGGCCGAGTCCTCGGGCTGC
CAAGCCACCGTCGCCTTCGCCGCCGTCTTCGATCAGTTGGCCCGAATGATGCTCGAGGAGTTCATCTTCTGGGCC
ATGAAATGCGATCTTCAGGCCTCGCTGGCCATCATCTTGCCCCAGGTCGTCTTTCTCGTGCGCTTCATCTTGGGC
GGAGTCTTCGTCGGCGTTCAAAGACCACAGTTCAAGCCCGTCTGCGTCGGCATCACCATTTCCACGCCCTTGGCA
ATCGTCGTTCTCGTCGCCGACGCTGTCATCGTCGTCATGTTATTGGTCCGCGCTTCTTCGGTCGGCATTTTTCGG
GACATACAGGAAAAGACGGCCCTCTTCGCCCGCAGCAGGGCACTGCTGCTGGTGACGCTGGGGCTTGTCATTTGG
ATTTCTATGAGCGTACCCATGATTTTGGGCATGGAAACATTCGACATAATTGTTCGGACCGTGCTTCCTGCTATT
GGCTCGCTTGTCGTTCTTGCCCTCATCGCAGTTCTCAGGAGCACTCCTCTCGAGGCGTGA
Transcript >Hirsu2|8452
ATGGCGAGTCCGGGCGACGAGCAGGCCCTTGCCGCCACCTTTCTCTTTGCCATCGTTGCCGCTGCCGCTGTCGCG
ACATCTTTCTTATACTTTAGAGGCGGCGTCTCATCACTCCTCCGAGATGGGCCGAGGCTGGTCCTCATTGGTTTC
CTCGCGACCTCCTTCCTTTGGGCTCTAGTAGGCTTCATCGCCACCTTCCTCAGGAGGGCCGAGTCCTCGGGCTGC
CAAGCCACCGTCGCCTTCGCCGCCGTCTTCGATCAGTTGGCCCGAATGATGCTCGAGGAGTTCATCTTCTGGGCC
ATGAAATGCGATCTTCAGGCCTCGCTGGCCATCATCTTGCCCCAGGTCGTCTTTCTCGTGCGCTTCATCTTGGGC
GGAGTCTTCGTCGGCGTTCAAAGACCACAGTTCAAGCCCGTCTGCGTCGGCATCACCATTTCCACGCCCTTGGCA
ATCGTCGTTCTCGTCGCCGACGCTGTCATCGTCGTCATGTTATTGGTCCGCGCTTCTTCGGTCGGCATTTTTCGG
GACATACAGGAAAAGACGGCCCTCTTCGCCCGCAGCAGGGCACTGCTGCTGGTGACGCTGGGGCTTGTCATTTGG
ATTTCTATGAGCGTACCCATGATTTTGGGCATGGAAACATTCGACATAATTGTTCGGACCGTGCTTCCTGCTATT
GGCTCGCTTGTCGTTCTTGCCCTCATCGCAGTTCTCAGGAGCACTCCTCTCGAGGCGTGA
Gene >Hirsu2|8452
ATGGCGAGTCCGGGCGACGAGCAGGCCCTTGCCGCCACCTTTCTCTTGTCAGTGTCCACGCCGATGGATGAATGG
GCTCAAAGAAGTCGACTTTGCTAACGTCACCGTCGCCATCAGTGCCATCGTTGCCGCTGCCGCTGTCGCGACATC
TTTCTTATACTTTAGAGGCGGCGTCTCATCACTCCTCCGAGATGGGCCGAGGCTGGTCCTCATTGGTTTCCTCGC
GACCTCCTTCCTTTGGGCTCTAGTAGGCTTCATCGCCACCTTCCTCAGGAGGGCCGAGTCCTCGGGCTGCCAAGC
CACCGTCGCCTTCGCCGCCGTCTTCGATCAGTTGGCCCGAATGATGCTCGAGGAGTTCATCTTCTGGGCCATGAA
ATGCGATCTTCAGGCCTCGCTGGCCATCATCTTGCCCCAGGTCGTCTTTCTCGTGCGCTTCATCTTGGGCGGAGT
CTTCGTCGGCGTTCAAAGACCACAGTTCAAGCCCGTCTGCGTCGGCATCACCATTTCCACGCCCTTGGCAATCGT
CGTTCTCGTCGCCGACGCTGTCATCGTCGTCATGTTATTGGTCCGCGCTTCTTCGGTCGGCATTTTTCGGGACAT
ACAGGAAAAGACGGCCCTCTTCGCCCGCAGCAGGGCACTGCTGCTGGTGACGCTGGGGCTTGTCATTTGGATTTC
TGTGAGTTGTTTCAAGGCTCTCGGCTCCGCCCCCGAATTCTTCCGTGTACAAGGATTTGTCTAACTCTGCGGCTG
CAGATGAGCGTACCCATGATTTTGGGCATGGAAACATTCGACATAATTGTTCGGACCGTGCTTCCTGCTATTGGC
TCGCTTGTCGTTCTTGGTATGTGTCTGAGTTGAGCCCTCCCTGCCAGTGGCTGGTGTTGATCTCTCCCCGCAGCC
CTCATCGCAGTTCTCAGGAGCAGTCTCAGGAGCTCTGAGACAAGCAGTTCAAAGTCAAATGGCCCGCAGATATCC
GATAGCCCCGATCAAAGCTCCTCTCGAGGCGTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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