Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8439
Gene name
LocationContig_550:43..1060
Strand-
Gene length (bp)1017
Transcript length (bp)837
Coding sequence length (bp)837
Protein length (aa) 279

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.166 0.1084 0.9164 0.3537 0.0757 0.0711 0.3805 0.2414 0.3675 0.0138

SignalP

SignalP signal predicted Location Score
Yes 1 - 31 0.999709

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6286
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|03779
Ophiocordyceps camponoti-rufipedis Ophun1|5302
Ophiocordyceps kimflemingae Ophio5|4993
Ophiocordyceps subramaniannii Hirsu2|8439 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8439
MGFLHLGSVCHAASLLLLFPLILLLAAVVEAEALERHDGVHRLAKRPYTTQAAVLLRRRGPDDVCGVSMKLCPAS
LGGKCCPDDYECASASCYATTKGPSTCGTKVGWYGCAAVYGGGCCPDGYMCQRAGNCVPPSGSPYTYGCPASQYL
CPASMSYGCCPSGMGCGVGQCYSTEPTAVTTTMIVTTSEGGRARELTTTVTATALPDAPTTFPAANAGGGESQKV
LKYYPAAIPQVSPAGSADKGGGISAGQLAGLVAGAARGRVPATAAPSTPTPTP*
Coding >Hirsu2|8439
ATGGGCTTCCTCCATCTCGGATCAGTATGTCATGCCGCCTCCCTGCTACTCCTCTTCCCTCTTATCCTGCTTCTG
GCGGCCGTCGTCGAGGCCGAGGCGCTCGAGCGCCATGATGGGGTCCATCGACTGGCGAAGCGCCCCTACACGACA
CAGGCCGCCGTGCTGCTGCGCCGCCGAGGCCCCGACGATGTCTGCGGCGTGAGCATGAAGCTGTGTCCCGCCAGT
CTAGGCGGGAAATGCTGTCCGGACGACTACGAATGCGCCAGCGCGAGCTGCTATGCCACGACCAAGGGCCCGTCG
ACCTGCGGCACCAAGGTCGGCTGGTATGGCTGTGCCGCCGTCTATGGAGGCGGCTGCTGTCCGGACGGCTACATG
TGCCAAAGAGCGGGCAACTGCGTGCCGCCTTCCGGCTCGCCGTATACGTACGGCTGTCCGGCCAGCCAGTACCTA
TGCCCGGCCTCGATGAGCTACGGGTGCTGTCCCAGCGGGATGGGATGCGGCGTCGGCCAGTGCTACTCGACCGAG
CCGACCGCCGTGACGACGACCATGATCGTGACGACCTCCGAGGGCGGCCGGGCGAGGGAACTGACGACGACGGTC
ACGGCCACGGCGCTGCCCGATGCGCCGACGACGTTCCCCGCAGCCAACGCCGGCGGCGGAGAGAGCCAAAAGGTG
CTCAAATACTATCCCGCCGCCATCCCGCAGGTCTCGCCCGCGGGTTCCGCCGACAAGGGCGGCGGCATCTCGGCC
GGGCAGCTGGCCGGGCTCGTGGCCGGCGCGGCTCGCGGCCGAGTGCCGGCGACGGCCGCTCCGTCGACTCCGACG
CCGACGCCATGA
Transcript >Hirsu2|8439
ATGGGCTTCCTCCATCTCGGATCAGTATGTCATGCCGCCTCCCTGCTACTCCTCTTCCCTCTTATCCTGCTTCTG
GCGGCCGTCGTCGAGGCCGAGGCGCTCGAGCGCCATGATGGGGTCCATCGACTGGCGAAGCGCCCCTACACGACA
CAGGCCGCCGTGCTGCTGCGCCGCCGAGGCCCCGACGATGTCTGCGGCGTGAGCATGAAGCTGTGTCCCGCCAGT
CTAGGCGGGAAATGCTGTCCGGACGACTACGAATGCGCCAGCGCGAGCTGCTATGCCACGACCAAGGGCCCGTCG
ACCTGCGGCACCAAGGTCGGCTGGTATGGCTGTGCCGCCGTCTATGGAGGCGGCTGCTGTCCGGACGGCTACATG
TGCCAAAGAGCGGGCAACTGCGTGCCGCCTTCCGGCTCGCCGTATACGTACGGCTGTCCGGCCAGCCAGTACCTA
TGCCCGGCCTCGATGAGCTACGGGTGCTGTCCCAGCGGGATGGGATGCGGCGTCGGCCAGTGCTACTCGACCGAG
CCGACCGCCGTGACGACGACCATGATCGTGACGACCTCCGAGGGCGGCCGGGCGAGGGAACTGACGACGACGGTC
ACGGCCACGGCGCTGCCCGATGCGCCGACGACGTTCCCCGCAGCCAACGCCGGCGGCGGAGAGAGCCAAAAGGTG
CTCAAATACTATCCCGCCGCCATCCCGCAGGTCTCGCCCGCGGGTTCCGCCGACAAGGGCGGCGGCATCTCGGCC
GGGCAGCTGGCCGGGCTCGTGGCCGGCGCGGCTCGCGGCCGAGTGCCGGCGACGGCCGCTCCGTCGACTCCGACG
CCGACGCCATGA
Gene >Hirsu2|8439
ATGGGCTTCCTCCATCTCGGATCAGTATGTCATGCCGCCTCCCTGCTACTCCTCTTCCCTCTTATCCTGCTTCTG
GCGGCCGTCGTCGAGGCCGAGGCGCTCGAGCGCCATGATGGGGTCCATCGACTGGCGAAGCGCCCCTACACGACA
CAGGCCGCCGTGCTGCTGCGCCGCCGAGGCCCCGACGATGTCTGCGGCGTGAGCATGAAGCTGTGTCCCGCCAGT
CTAGGCGGGAAATGCTGTCCGGACGACTACGAATGCGCCAGCGCGAGCTGCTATGCCACGACCAAGGGCCCGTCG
ACCTGCGGCACCAAGGTCGGCTGGTATGGCTGTGCCGCCGTCTATGGAGGTGAGTTTTGGCAATGACCTCGCGAG
AGACGATGCCCTAAACCGCAGCGACGGCCGTCTTCCTCTCTAACCGACGTCTAGGCGGCTGCTGTCCGGACGGCT
ACATGTGCCAAAGAGCGGGCAACTGCGTGCCGCCTTCCGGCTCGCCGTATACGTACGGCTGTCCGGCCAGCCAGT
ACCTATGCCCGGCCTCGATGAGCTACGGGTGCTGTCCCAGCGGGATGGGATGCGGCGTCGGCCAGTGCTACTCGA
CCGAGCCGACCGCCGTGACGACGACCATGATCGTGACGACCTCCGAGGGCGGCCGGGCGAGGGAACTGACGACGA
CGGTCACGGCCACGGCGCTGCCCGATGCGCCGACGACGTTCCCCGCAGCCAACGCCGGCGGCGGAGAGAGCCAAA
AGGTGCTCAAATACTATCCCGCCGCCATCCCGCAGGTCTCGCCCGCGGGTTCCGCCGACAAGGGCGGCGGCATCT
CGGCCGGGCAGCTGGCCGGGCTCGTGGCCGGCGCGGCGTCCTTCGTCGCCCTCGCCCTCGTCGCCGCCTACCTCG
TCATGCGGCGCTTCAAGGCCCGAGGCGCGGCCGGGGACGAGCCGTCGCGGCCCGAGATGAAGTCGCGGCCGAGTG
CCGGCGACGGCCGCTCCGTCGACTCCGACGCCGACGCCATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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