Protein ID | Hirsu2|8439 |
Gene name | |
Location | Contig_550:43..1060 |
Strand | - |
Gene length (bp) | 1017 |
Transcript length (bp) | 837 |
Coding sequence length (bp) | 837 |
Protein length (aa) | 279 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.166 | 0.1084 | 0.9164 | 0.3537 | 0.0757 | 0.0711 | 0.3805 | 0.2414 | 0.3675 | 0.0138 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 31 | 0.999709 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 29 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 6286 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|8439 MGFLHLGSVCHAASLLLLFPLILLLAAVVEAEALERHDGVHRLAKRPYTTQAAVLLRRRGPDDVCGVSMKLCPAS LGGKCCPDDYECASASCYATTKGPSTCGTKVGWYGCAAVYGGGCCPDGYMCQRAGNCVPPSGSPYTYGCPASQYL CPASMSYGCCPSGMGCGVGQCYSTEPTAVTTTMIVTTSEGGRARELTTTVTATALPDAPTTFPAANAGGGESQKV LKYYPAAIPQVSPAGSADKGGGISAGQLAGLVAGAARGRVPATAAPSTPTPTP* |
Coding | >Hirsu2|8439 ATGGGCTTCCTCCATCTCGGATCAGTATGTCATGCCGCCTCCCTGCTACTCCTCTTCCCTCTTATCCTGCTTCTG GCGGCCGTCGTCGAGGCCGAGGCGCTCGAGCGCCATGATGGGGTCCATCGACTGGCGAAGCGCCCCTACACGACA CAGGCCGCCGTGCTGCTGCGCCGCCGAGGCCCCGACGATGTCTGCGGCGTGAGCATGAAGCTGTGTCCCGCCAGT CTAGGCGGGAAATGCTGTCCGGACGACTACGAATGCGCCAGCGCGAGCTGCTATGCCACGACCAAGGGCCCGTCG ACCTGCGGCACCAAGGTCGGCTGGTATGGCTGTGCCGCCGTCTATGGAGGCGGCTGCTGTCCGGACGGCTACATG TGCCAAAGAGCGGGCAACTGCGTGCCGCCTTCCGGCTCGCCGTATACGTACGGCTGTCCGGCCAGCCAGTACCTA TGCCCGGCCTCGATGAGCTACGGGTGCTGTCCCAGCGGGATGGGATGCGGCGTCGGCCAGTGCTACTCGACCGAG CCGACCGCCGTGACGACGACCATGATCGTGACGACCTCCGAGGGCGGCCGGGCGAGGGAACTGACGACGACGGTC ACGGCCACGGCGCTGCCCGATGCGCCGACGACGTTCCCCGCAGCCAACGCCGGCGGCGGAGAGAGCCAAAAGGTG CTCAAATACTATCCCGCCGCCATCCCGCAGGTCTCGCCCGCGGGTTCCGCCGACAAGGGCGGCGGCATCTCGGCC GGGCAGCTGGCCGGGCTCGTGGCCGGCGCGGCTCGCGGCCGAGTGCCGGCGACGGCCGCTCCGTCGACTCCGACG CCGACGCCATGA |
Transcript | >Hirsu2|8439 ATGGGCTTCCTCCATCTCGGATCAGTATGTCATGCCGCCTCCCTGCTACTCCTCTTCCCTCTTATCCTGCTTCTG GCGGCCGTCGTCGAGGCCGAGGCGCTCGAGCGCCATGATGGGGTCCATCGACTGGCGAAGCGCCCCTACACGACA CAGGCCGCCGTGCTGCTGCGCCGCCGAGGCCCCGACGATGTCTGCGGCGTGAGCATGAAGCTGTGTCCCGCCAGT CTAGGCGGGAAATGCTGTCCGGACGACTACGAATGCGCCAGCGCGAGCTGCTATGCCACGACCAAGGGCCCGTCG ACCTGCGGCACCAAGGTCGGCTGGTATGGCTGTGCCGCCGTCTATGGAGGCGGCTGCTGTCCGGACGGCTACATG TGCCAAAGAGCGGGCAACTGCGTGCCGCCTTCCGGCTCGCCGTATACGTACGGCTGTCCGGCCAGCCAGTACCTA TGCCCGGCCTCGATGAGCTACGGGTGCTGTCCCAGCGGGATGGGATGCGGCGTCGGCCAGTGCTACTCGACCGAG CCGACCGCCGTGACGACGACCATGATCGTGACGACCTCCGAGGGCGGCCGGGCGAGGGAACTGACGACGACGGTC ACGGCCACGGCGCTGCCCGATGCGCCGACGACGTTCCCCGCAGCCAACGCCGGCGGCGGAGAGAGCCAAAAGGTG CTCAAATACTATCCCGCCGCCATCCCGCAGGTCTCGCCCGCGGGTTCCGCCGACAAGGGCGGCGGCATCTCGGCC GGGCAGCTGGCCGGGCTCGTGGCCGGCGCGGCTCGCGGCCGAGTGCCGGCGACGGCCGCTCCGTCGACTCCGACG CCGACGCCATGA |
Gene | >Hirsu2|8439 ATGGGCTTCCTCCATCTCGGATCAGTATGTCATGCCGCCTCCCTGCTACTCCTCTTCCCTCTTATCCTGCTTCTG GCGGCCGTCGTCGAGGCCGAGGCGCTCGAGCGCCATGATGGGGTCCATCGACTGGCGAAGCGCCCCTACACGACA CAGGCCGCCGTGCTGCTGCGCCGCCGAGGCCCCGACGATGTCTGCGGCGTGAGCATGAAGCTGTGTCCCGCCAGT CTAGGCGGGAAATGCTGTCCGGACGACTACGAATGCGCCAGCGCGAGCTGCTATGCCACGACCAAGGGCCCGTCG ACCTGCGGCACCAAGGTCGGCTGGTATGGCTGTGCCGCCGTCTATGGAGGTGAGTTTTGGCAATGACCTCGCGAG AGACGATGCCCTAAACCGCAGCGACGGCCGTCTTCCTCTCTAACCGACGTCTAGGCGGCTGCTGTCCGGACGGCT ACATGTGCCAAAGAGCGGGCAACTGCGTGCCGCCTTCCGGCTCGCCGTATACGTACGGCTGTCCGGCCAGCCAGT ACCTATGCCCGGCCTCGATGAGCTACGGGTGCTGTCCCAGCGGGATGGGATGCGGCGTCGGCCAGTGCTACTCGA CCGAGCCGACCGCCGTGACGACGACCATGATCGTGACGACCTCCGAGGGCGGCCGGGCGAGGGAACTGACGACGA CGGTCACGGCCACGGCGCTGCCCGATGCGCCGACGACGTTCCCCGCAGCCAACGCCGGCGGCGGAGAGAGCCAAA AGGTGCTCAAATACTATCCCGCCGCCATCCCGCAGGTCTCGCCCGCGGGTTCCGCCGACAAGGGCGGCGGCATCT CGGCCGGGCAGCTGGCCGGGCTCGTGGCCGGCGCGGCGTCCTTCGTCGCCCTCGCCCTCGTCGCCGCCTACCTCG TCATGCGGCGCTTCAAGGCCCGAGGCGCGGCCGGGGACGAGCCGTCGCGGCCCGAGATGAAGTCGCGGCCGAGTG CCGGCGACGGCCGCTCCGTCGACTCCGACGCCGACGCCATGA |