Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8431
Gene name
LocationContig_55:26346..27045
Strand-
Gene length (bp)699
Transcript length (bp)699
Coding sequence length (bp)699
Protein length (aa) 233

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus 0.5114 0.5462 0.3452 0.0957 0.282 0.0567 0.0596 0.1729 0.1426 0.0164

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5983
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|10285
Ophiocordyceps subramaniannii Hirsu2|297
Ophiocordyceps subramaniannii Hirsu2|6349
Ophiocordyceps subramaniannii Hirsu2|7735
Ophiocordyceps subramaniannii Hirsu2|8431 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8431
MFVRSDAIYWFLQTWQRTLASWASLLHVTTLPPDGSVTTLDLTAATQAIDIVIAGKMEPALPRKFGYLRFFQFLE
CVKAKIGDDKAQGLIPRGKSVVNSSRAYSIYVNAQVVATKQNDLRRNRQMGGRFHQISVESPLLLAVFAKAADMF
AYVLAVTKLSSFGKLTCYRDPKKVDEPTFAVLASRAREDIPKELRDVCQFLTTKVEEAICSGAPYSQYLGQDMTN
QIREHLT*
Coding >Hirsu2|8431
ATGTTCGTCAGAAGCGACGCTATCTACTGGTTTTTGCAAACCTGGCAGCGTACGCTGGCTTCTTGGGCGTCATTG
CTGCATGTCACAACGCTTCCGCCGGACGGTTCCGTCACTACCCTCGACCTGACTGCGGCCACTCAAGCTATAGAT
ATTGTTATTGCTGGAAAAATGGAGCCAGCGCTGCCGCGAAAATTTGGCTATTTACGATTTTTCCAATTCCTGGAG
TGTGTGAAGGCCAAGATTGGCGACGACAAGGCCCAGGGATTGATTCCCCGTGGAAAGAGTGTCGTCAATAGTTCT
CGTGCCTATAGCATATATGTCAATGCCCAAGTTGTGGCTACCAAACAGAACGATCTCCGGCGCAACAGGCAAATG
GGCGGACGCTTTCATCAAATTTCAGTTGAATCCCCTCTTCTTCTGGCCGTCTTCGCCAAAGCAGCGGACATGTTC
GCGTACGTACTTGCTGTTACGAAACTTTCATCTTTTGGAAAGCTGACCTGCTACAGGGATCCAAAGAAAGTAGAC
GAGCCTACTTTCGCAGTTTTGGCCTCCCGAGCTCGTGAGGATATTCCGAAGGAGCTCCGAGACGTCTGTCAGTTT
TTAACCACCAAGGTAGAGGAAGCGATATGTTCAGGGGCCCCTTACAGTCAATATCTGGGGCAGGATATGACGAAT
CAAATTAGAGAGCACTTGACCTAG
Transcript >Hirsu2|8431
ATGTTCGTCAGAAGCGACGCTATCTACTGGTTTTTGCAAACCTGGCAGCGTACGCTGGCTTCTTGGGCGTCATTG
CTGCATGTCACAACGCTTCCGCCGGACGGTTCCGTCACTACCCTCGACCTGACTGCGGCCACTCAAGCTATAGAT
ATTGTTATTGCTGGAAAAATGGAGCCAGCGCTGCCGCGAAAATTTGGCTATTTACGATTTTTCCAATTCCTGGAG
TGTGTGAAGGCCAAGATTGGCGACGACAAGGCCCAGGGATTGATTCCCCGTGGAAAGAGTGTCGTCAATAGTTCT
CGTGCCTATAGCATATATGTCAATGCCCAAGTTGTGGCTACCAAACAGAACGATCTCCGGCGCAACAGGCAAATG
GGCGGACGCTTTCATCAAATTTCAGTTGAATCCCCTCTTCTTCTGGCCGTCTTCGCCAAAGCAGCGGACATGTTC
GCGTACGTACTTGCTGTTACGAAACTTTCATCTTTTGGAAAGCTGACCTGCTACAGGGATCCAAAGAAAGTAGAC
GAGCCTACTTTCGCAGTTTTGGCCTCCCGAGCTCGTGAGGATATTCCGAAGGAGCTCCGAGACGTCTGTCAGTTT
TTAACCACCAAGGTAGAGGAAGCGATATGTTCAGGGGCCCCTTACAGTCAATATCTGGGGCAGGATATGACGAAT
CAAATTAGAGAGCACTTGACCTAG
Gene >Hirsu2|8431
ATGTTCGTCAGAAGCGACGCTATCTACTGGTTTTTGCAAACCTGGCAGCGTACGCTGGCTTCTTGGGCGTCATTG
CTGCATGTCACAACGCTTCCGCCGGACGGTTCCGTCACTACCCTCGACCTGACTGCGGCCACTCAAGCTATAGAT
ATTGTTATTGCTGGAAAAATGGAGCCAGCGCTGCCGCGAAAATTTGGCTATTTACGATTTTTCCAATTCCTGGAG
TGTGTGAAGGCCAAGATTGGCGACGACAAGGCCCAGGGATTGATTCCCCGTGGAAAGAGTGTCGTCAATAGTTCT
CGTGCCTATAGCATATATGTCAATGCCCAAGTTGTGGCTACCAAACAGAACGATCTCCGGCGCAACAGGCAAATG
GGCGGACGCTTTCATCAAATTTCAGTTGAATCCCCTCTTCTTCTGGCCGTCTTCGCCAAAGCAGCGGACATGTTC
GCGTACGTACTTGCTGTTACGAAACTTTCATCTTTTGGAAAGCTGACCTGCTACAGGGATCCAAAGAAAGTAGAC
GAGCCTACTTTCGCAGTTTTGGCCTCCCGAGCTCGTGAGGATATTCCGAAGGAGCTCCGAGACGTCTGTCAGTTT
TTAACCACCAAGGTAGAGGAAGCGATATGTTCAGGGGCCCCTTACAGTCAATATCTGGGGCAGGATATGACGAAT
CAAATTAGAGAGCACTTGACCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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