Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8400
Gene name
LocationContig_546:14473..15887
Strand+
Gene length (bp)1414
Transcript length (bp)1239
Coding sequence length (bp)1239
Protein length (aa) 413

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular|Cell membrane 0.1053 0.0492 0.8282 0.5764 0.0785 0.0051 0.1977 0.1925 0.156 0.0017

SignalP

SignalP signal predicted Location Score
Yes 1 - 17 0.999706

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6771
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6559
Ophiocordyceps australis map64 (Brazil) OphauB2|216
Ophiocordyceps subramaniannii Hirsu2|8400 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8400
MRFSVLALSAAAAAVNAQNPQQPGGASICDRYTQLLLRDNSPQSQQKLLTMLVNTALIGNYTQPNVGVRVPGILT
AGESEGQRVDLMPYFNGARPSTNTGGQQGESVNFLDGGGAEPLRRNLPANDNRSRQFVLMTHLYSFFGSILRCST
QGAPGFDQYNGRASMFEVHQFMGLNHAEISYFVQQVGLAAASFGVHRADVDAIANQLNGVFNVRCGQPAAVVPGQ
GPQPQSICTDPHACPAAPGAACDRYPGQPGPAQYPGQPGPAQYPGQPRPDQYPGQPRPDQYPGQYPGQPGQDQYP
GQPRPDQYRPDQYPGQPRPDQVAGGPWTSAYTAGGPFATGAYTPGVFTASAYTPGAFTSGPNPSYNPTGPLSGPT
PGPLSPSPYPSTVPTGSAAGKAVSLAAAAAALAALLL*
Coding >Hirsu2|8400
ATGCGTTTCTCCGTCCTCGCCCTCTCCGCAGCGGCTGCGGCCGTCAACGCGCAGAACCCCCAGCAGCCGGGCGGG
GCGTCCATCTGCGACCGCTACACCCAGCTCCTCCTGCGCGACAACTCGCCGCAGAGTCAGCAGAAGCTGCTGACG
ATGCTGGTCAACACGGCCCTCATCGGAAACTACACCCAGCCGAACGTGGGCGTGCGAGTGCCCGGCATCCTGACG
GCCGGCGAGAGCGAGGGCCAGAGGGTCGACCTGATGCCGTACTTTAACGGCGCGCGGCCGTCGACCAACACGGGC
GGCCAGCAGGGCGAGTCGGTCAACTTCCTCGACGGCGGCGGCGCCGAGCCCTTGAGGAGGAACCTGCCGGCCAAC
GACAACCGGTCGAGGCAGTTCGTCCTCATGACGCACCTGTACAGCTTCTTCGGCTCGATTCTCCGGTGCAGCACG
CAGGGTGCGCCCGGCTTCGACCAGTATAACGGCCGGGCCTCGATGTTCGAGGTGCACCAGTTCATGGGGCTCAAC
CACGCCGAGATCAGCTATTTCGTCCAGCAGGTCGGTCTGGCCGCGGCCTCGTTCGGCGTCCACCGCGCCGACGTC
GACGCCATCGCCAACCAGCTCAACGGGGTCTTCAACGTCCGCTGCGGCCAGCCCGCCGCCGTCGTCCCGGGCCAG
GGCCCGCAGCCGCAGTCCATCTGCACCGACCCGCACGCCTGTCCGGCGGCCCCCGGCGCCGCCTGCGACCGCTAT
CCCGGCCAGCCTGGCCCGGCCCAATATCCCGGCCAGCCTGGCCCGGCCCAATATCCCGGCCAGCCCCGCCCGGAC
CAGTATCCCGGCCAGCCCCGCCCTGACCAGTATCCCGGCCAGTATCCCGGCCAGCCCGGTCAGGACCAGTATCCC
GGCCAGCCTCGCCCTGACCAGTACCGCCCTGACCAGTACCCCGGCCAGCCTCGCCCGGACCAGGTCGCCGGCGGC
CCGTGGACGTCGGCCTACACGGCGGGCGGGCCGTTCGCCACCGGCGCCTACACCCCCGGCGTCTTCACCGCCAGC
GCCTACACCCCCGGCGCCTTCACCAGCGGCCCGAACCCGTCCTACAACCCGACCGGCCCGCTGTCGGGGCCGACG
CCCGGCCCGCTGTCGCCCTCGCCCTACCCGTCGACGGTGCCGACCGGGTCTGCTGCCGGCAAGGCCGTTAGCTTG
GCGGCGGCGGCGGCGGCCCTCGCCGCCCTGCTGTTATAA
Transcript >Hirsu2|8400
ATGCGTTTCTCCGTCCTCGCCCTCTCCGCAGCGGCTGCGGCCGTCAACGCGCAGAACCCCCAGCAGCCGGGCGGG
GCGTCCATCTGCGACCGCTACACCCAGCTCCTCCTGCGCGACAACTCGCCGCAGAGTCAGCAGAAGCTGCTGACG
ATGCTGGTCAACACGGCCCTCATCGGAAACTACACCCAGCCGAACGTGGGCGTGCGAGTGCCCGGCATCCTGACG
GCCGGCGAGAGCGAGGGCCAGAGGGTCGACCTGATGCCGTACTTTAACGGCGCGCGGCCGTCGACCAACACGGGC
GGCCAGCAGGGCGAGTCGGTCAACTTCCTCGACGGCGGCGGCGCCGAGCCCTTGAGGAGGAACCTGCCGGCCAAC
GACAACCGGTCGAGGCAGTTCGTCCTCATGACGCACCTGTACAGCTTCTTCGGCTCGATTCTCCGGTGCAGCACG
CAGGGTGCGCCCGGCTTCGACCAGTATAACGGCCGGGCCTCGATGTTCGAGGTGCACCAGTTCATGGGGCTCAAC
CACGCCGAGATCAGCTATTTCGTCCAGCAGGTCGGTCTGGCCGCGGCCTCGTTCGGCGTCCACCGCGCCGACGTC
GACGCCATCGCCAACCAGCTCAACGGGGTCTTCAACGTCCGCTGCGGCCAGCCCGCCGCCGTCGTCCCGGGCCAG
GGCCCGCAGCCGCAGTCCATCTGCACCGACCCGCACGCCTGTCCGGCGGCCCCCGGCGCCGCCTGCGACCGCTAT
CCCGGCCAGCCTGGCCCGGCCCAATATCCCGGCCAGCCTGGCCCGGCCCAATATCCCGGCCAGCCCCGCCCGGAC
CAGTATCCCGGCCAGCCCCGCCCTGACCAGTATCCCGGCCAGTATCCCGGCCAGCCCGGTCAGGACCAGTATCCC
GGCCAGCCTCGCCCTGACCAGTACCGCCCTGACCAGTACCCCGGCCAGCCTCGCCCGGACCAGGTCGCCGGCGGC
CCGTGGACGTCGGCCTACACGGCGGGCGGGCCGTTCGCCACCGGCGCCTACACCCCCGGCGTCTTCACCGCCAGC
GCCTACACCCCCGGCGCCTTCACCAGCGGCCCGAACCCGTCCTACAACCCGACCGGCCCGCTGTCGGGGCCGACG
CCCGGCCCGCTGTCGCCCTCGCCCTACCCGTCGACGGTGCCGACCGGGTCTGCTGCCGGCAAGGCCGTTAGCTTG
GCGGCGGCGGCGGCGGCCCTCGCCGCCCTGCTGTTATAA
Gene >Hirsu2|8400
ATGCGTTTCTCCGTCCTCGCCCTCTCCGCAGCGGCTGCGGCCGTCAACGCGCAGAACCCCCAGCAGCCGGGCGGG
GCGTCCATCTGCGACCGCTACACCCAGCTCCTCCTGCGCGACAACTCGCCGCAGAGTCAGCAGAAGCTGCTGACG
ATGCTGGTCAACACGGCCCTCATCGGAAACTGTGAGTCGCCAGCGACCAGCCCTCCCCCCCCCCTGGCTCATCTT
CAAAGCTGATCCCTCATTGTTCGCCAGACACCCAGCCGAACGTGGGCGTGCGAGTGCCCGGCATCCTGACGGCCG
GCGAGAGCGAGGGCCAGAGGGTCGACCTGATGCCGTACTTTAACGGCGCGCGGCCGTCGACCAACACGGGCGGCC
AGCAGGGCGAGTCGGTCAACTTCCTCGACGGCGGCGGCGCCGAGCCCTTGAGGAGGAACCTGCCGGCCAACGACA
ACCGGTCGAGGCAGTTGTACGTCCGCTCCTCTCGCCAACGACGAGACTCTTTGTCCTCTCTCTCTCTCCAGTCCT
CCCCTCCGCTCCGATGCTGACGTGCGACTCCTTTTCCCACGACAGCGTCCTCATGACGCACCTGTACAGCTTCTT
CGGCTCGATTCTCCGGTGCAGCACGCAGGGTGCGCCCGGCTTCGACCAGTATAACGGCCGGGCCTCGATGTTCGA
GGTGCACCAGTTCATGGGGCTCAACCACGCCGAGATCAGCTATTTCGTCCAGCAGGTCGGTCTGGCCGCGGCCTC
GTTCGGCGTCCACCGCGCCGACGTCGACGCCATCGCCAACCAGCTCAACGGGGTCTTCAACGTCCGCTGCGGCCA
GCCCGCCGCCGTCGTCCCGGGCCAGGGCCCGCAGCCGCAGTCCATCTGCACCGACCCGCACGCCTGTCCGGCGGC
CCCCGGCGCCGCCTGCGACCGCTATCCCGGCCAGCCTGGCCCGGCCCAATATCCCGGCCAGCCTGGCCCGGCCCA
ATATCCCGGCCAGCCCCGCCCGGACCAGTATCCCGGCCAGCCCCGCCCTGACCAGTATCCCGGCCAGTATCCCGG
CCAGCCCGGTCAGGACCAGTATCCCGGCCAGCCTCGCCCTGACCAGTACCGCCCTGACCAGTACCCCGGCCAGCC
TCGCCCGGACCAGGTCGCCGGCGGCCCGTGGACGTCGGCCTACACGGCGGGCGGGCCGTTCGCCACCGGCGCCTA
CACCCCCGGCGTCTTCACCGCCAGCGCCTACACCCCCGGCGCCTTCACCAGCGGCCCGAACCCGTCCTACAACCC
GACCGGCCCGCTGTCGGGGCCGACGCCCGGCCCGCTGTCGCCCTCGCCCTACCCGTCGACGGTGCCGACCGGGTC
TGCTGCCGGCAAGGCCGTTAGCTTGGCGGCGGCGGCGGCGGCCCTCGCCGCCCTGCTGTTATAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail