Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|84
Gene name
LocationContig_101:25018..26559
Strand-
Gene length (bp)1541
Transcript length (bp)1437
Coding sequence length (bp)1437
Protein length (aa) 479

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 1.1E-21 48 173

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0003824 catalytic activity Yes
GO:0003674 molecular_function No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus Nuclear localization signal 0.5373 0.7772 0.536 0.078 0.0459 0.0201 0.1785 0.0217 0.0948 0.0012

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup369
Change Orthofinder run
Species Protein ID
Ophiocordyceps kimflemingae Ophio5|941
Ophiocordyceps subramaniannii Hirsu2|10220
Ophiocordyceps subramaniannii Hirsu2|1656
Ophiocordyceps subramaniannii Hirsu2|552
Ophiocordyceps subramaniannii Hirsu2|7707
Ophiocordyceps subramaniannii Hirsu2|7736
Ophiocordyceps subramaniannii Hirsu2|8187
Ophiocordyceps subramaniannii Hirsu2|84 (this protein)
Ophiocordyceps subramaniannii Hirsu2|8425
Ophiocordyceps subramaniannii Hirsu2|8428

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|84
MIPSQTHETTRPIRSMLWVRADLEAEQVATNSADLTAAVLRLSDRDVMVVSVYVEGQSEEALLSAVRELHRLVEE
FRSGARRRTDVLAGDFNRHDLLWGGDEITTRRQGEAQPIIDLMNDHGFCSLLPRGTKTWQGPDLESTIDLVLATA
ELADEMVTCSIHPTEHGSDHRAIETTFDVTMPERRWKARLLFKNAPWAAIRARVSEDLERLPWHGDTQEQTDRLM
AAVSDAVHGLTPRAKPSPNRSALQAIRQPRQQSGQCTIREIYDRIDYFQDRGCGVTLLWVPAKDEDFALGLLAKA
AAQRATSPRCNAEPSTYQVRSTTLRLALASNQRFGRLPEGVGKYSRRIDKALPGKLTRALYDSLKRREAEALAQL
RTGLTRLNSYLHRIGAVESDMCDCGQAAETIEHFLFRCKKWTTQPEIMVRYSRTKIGNLSFFLGGKAWYGNDRWK
PDMQAVRAAIKFAMATKRLDADQQPSTN*
Coding >Hirsu2|84
ATGATACCGTCGCAGACGCATGAGACGACCCGGCCGATCCGGAGCATGCTGTGGGTGCGAGCCGACCTCGAGGCG
GAACAAGTGGCAACGAACTCGGCGGATCTAACTGCAGCGGTGCTTCGACTTTCGGACCGAGATGTGATGGTAGTG
TCGGTGTACGTGGAGGGGCAGAGTGAAGAGGCGCTGCTGAGTGCAGTACGAGAGCTGCATCGCTTGGTGGAGGAG
TTCCGCAGCGGAGCAAGGCGGCGAACGGACGTCCTCGCAGGGGACTTCAATCGCCACGATCTGTTGTGGGGAGGT
GACGAGATAACAACAAGAAGACAGGGGGAAGCGCAGCCGATCATCGACCTAATGAATGATCACGGCTTCTGCAGT
CTCCTGCCTCGGGGCACGAAGACCTGGCAGGGCCCCGACTTGGAAAGCACGATCGACCTGGTGCTTGCAACGGCC
GAGCTGGCAGACGAGATGGTGACATGCAGCATACACCCCACGGAGCACGGGTCGGACCACAGAGCGATTGAGACG
ACCTTCGACGTGACCATGCCGGAGAGAAGGTGGAAAGCGAGACTCCTATTCAAAAACGCACCATGGGCGGCGATT
AGGGCTAGAGTGAGCGAGGATTTGGAAAGGCTGCCTTGGCACGGCGATACGCAAGAGCAGACCGACCGGCTGATG
GCGGCCGTCTCAGATGCGGTCCACGGGCTAACGCCCCGAGCGAAGCCGTCGCCCAACCGCTCGGCACTGCAAGCC
ATCAGACAGCCACGCCAGCAGTCTGGCCAATGCACTATCCGAGAGATATATGACCGCATCGATTATTTCCAGGAT
AGAGGATGTGGTGTCACGCTCTTGTGGGTGCCTGCGAAAGACGAAGACTTTGCTCTGGGCCTGTTGGCGAAGGCC
GCAGCACAGAGAGCGACAAGTCCAAGATGCAATGCGGAACCATCGACGTACCAAGTGCGATCAACTACACTGCGC
CTGGCACTCGCCAGCAACCAACGATTCGGACGACTCCCAGAAGGAGTTGGAAAATATTCGAGACGCATCGACAAG
GCACTGCCGGGCAAGCTCACCCGCGCGCTATACGACTCGCTCAAGAGAAGGGAGGCGGAGGCGCTGGCGCAGCTC
CGAACGGGCTTGACACGACTGAACAGCTACCTTCACAGAATAGGCGCAGTGGAATCGGACATGTGTGACTGTGGA
CAAGCAGCAGAGACGATAGAGCACTTCCTATTTCGTTGCAAGAAGTGGACAACGCAACCCGAGATTATGGTGAGA
TATTCACGGACAAAGATAGGGAATCTCTCGTTCTTTTTGGGCGGGAAAGCGTGGTATGGTAACGACAGGTGGAAG
CCAGACATGCAGGCCGTTCGTGCGGCAATCAAGTTTGCGATGGCGACGAAGAGACTCGATGCGGACCAGCAGCCA
TCGACGAACTGA
Transcript >Hirsu2|84
ATGATACCGTCGCAGACGCATGAGACGACCCGGCCGATCCGGAGCATGCTGTGGGTGCGAGCCGACCTCGAGGCG
GAACAAGTGGCAACGAACTCGGCGGATCTAACTGCAGCGGTGCTTCGACTTTCGGACCGAGATGTGATGGTAGTG
TCGGTGTACGTGGAGGGGCAGAGTGAAGAGGCGCTGCTGAGTGCAGTACGAGAGCTGCATCGCTTGGTGGAGGAG
TTCCGCAGCGGAGCAAGGCGGCGAACGGACGTCCTCGCAGGGGACTTCAATCGCCACGATCTGTTGTGGGGAGGT
GACGAGATAACAACAAGAAGACAGGGGGAAGCGCAGCCGATCATCGACCTAATGAATGATCACGGCTTCTGCAGT
CTCCTGCCTCGGGGCACGAAGACCTGGCAGGGCCCCGACTTGGAAAGCACGATCGACCTGGTGCTTGCAACGGCC
GAGCTGGCAGACGAGATGGTGACATGCAGCATACACCCCACGGAGCACGGGTCGGACCACAGAGCGATTGAGACG
ACCTTCGACGTGACCATGCCGGAGAGAAGGTGGAAAGCGAGACTCCTATTCAAAAACGCACCATGGGCGGCGATT
AGGGCTAGAGTGAGCGAGGATTTGGAAAGGCTGCCTTGGCACGGCGATACGCAAGAGCAGACCGACCGGCTGATG
GCGGCCGTCTCAGATGCGGTCCACGGGCTAACGCCCCGAGCGAAGCCGTCGCCCAACCGCTCGGCACTGCAAGCC
ATCAGACAGCCACGCCAGCAGTCTGGCCAATGCACTATCCGAGAGATATATGACCGCATCGATTATTTCCAGGAT
AGAGGATGTGGTGTCACGCTCTTGTGGGTGCCTGCGAAAGACGAAGACTTTGCTCTGGGCCTGTTGGCGAAGGCC
GCAGCACAGAGAGCGACAAGTCCAAGATGCAATGCGGAACCATCGACGTACCAAGTGCGATCAACTACACTGCGC
CTGGCACTCGCCAGCAACCAACGATTCGGACGACTCCCAGAAGGAGTTGGAAAATATTCGAGACGCATCGACAAG
GCACTGCCGGGCAAGCTCACCCGCGCGCTATACGACTCGCTCAAGAGAAGGGAGGCGGAGGCGCTGGCGCAGCTC
CGAACGGGCTTGACACGACTGAACAGCTACCTTCACAGAATAGGCGCAGTGGAATCGGACATGTGTGACTGTGGA
CAAGCAGCAGAGACGATAGAGCACTTCCTATTTCGTTGCAAGAAGTGGACAACGCAACCCGAGATTATGGTGAGA
TATTCACGGACAAAGATAGGGAATCTCTCGTTCTTTTTGGGCGGGAAAGCGTGGTATGGTAACGACAGGTGGAAG
CCAGACATGCAGGCCGTTCGTGCGGCAATCAAGTTTGCGATGGCGACGAAGAGACTCGATGCGGACCAGCAGCCA
TCGACGAACTGA
Gene >Hirsu2|84
ATGATACCGTCGCAGACGCATGAGACGACCCGGCCGATCCGGAGCATGCTGTGGGTGCGAGCCGACCTCGAGGCG
GAACAAGTGGCAACGAACTCGGCGGATCTAACTGCAGCGGTGCTTCGACTTTCGGACCGAGATGTGATGGTAGTG
TCGGTGTACGTGGAGGGGCAGAGTGAAGAGGCGCTGCTGAGTGCAGTACGAGAGCTGCATCGCTTGGTGGAGGAG
TTCCGCAGCGGAGCAAGGCGGCGAACGGACGTCCTCGCAGGGGACTTCAATCGCCACGATCTGTTGTGGGGAGGT
GACGAGATAACAACAAGAAGACAGGGGGAAGCGCAGCCGATCATCGACCTAATGAATGATCACGGCTTCTGCAGT
CTCCTGCCTCGGGGCACGAAGACCTGGCAGGGCCCCGACTTGGAAAGCACGATCGACCTGGTGCTTGCAACGGCC
GAGCTGGCAGACGAGATGGTGACATGCAGCATACACCCCACGGAGCACGGGTCGGACCACAGAGCGATTGAGACG
ACCTTCGACGTGACCATGCCGGAGAGAAGGTGGAAAGCGAGACTCCTATTCAAAAACGCACCATGGGCGGCGATT
AGGGCTAGAGTGAGCGAGGATTTGGAAAGGCTGCCTTGGCACGGCGATACGCAAGAGCAGACCGACCGGCTGATG
GCGGCCGTCTCAGATGCGGTCCACGGGCTAACGCCCCGAGCGAAGCCGTCGCCGTACGCAAACAGAACCCATACA
CAGTAGAACTCGCAGCAGTCGCGATGGCGCTGAAGTGCATGCCGGCTGGACTGCATTGCCGAGACCTAACGATCA
TTACCAGCAACCGCTCGGCACTGCAAGCCATCAGACAGCCACGCCAGCAGTCTGGCCAATGCACTATCCGAGAGA
TATATGACCGCATCGATTATTTCCAGGATAGAGGATGTGGTGTCACGCTCTTGTGGGTGCCTGCGAAAGACGAAG
ACTTTGCTCTGGGCCTGTTGGCGAAGGCCGCAGCACAGAGAGCGACAAGTCCAAGATGCAATGCGGAACCATCGA
CGTACCAAGTGCGATCAACTACACTGCGCCTGGCACTCGCCAGCAACCAACGATTCGGACGACTCCCAGAAGGAG
TTGGAAAATATTCGAGACGCATCGACAAGGCACTGCCGGGCAAGCTCACCCGCGCGCTATACGACTCGCTCAAGA
GAAGGGAGGCGGAGGCGCTGGCGCAGCTCCGAACGGGCTTGACACGACTGAACAGCTACCTTCACAGAATAGGCG
CAGTGGAATCGGACATGTGTGACTGTGGACAAGCAGCAGAGACGATAGAGCACTTCCTATTTCGTTGCAAGAAGT
GGACAACGCAACCCGAGATTATGGTGAGATATTCACGGACAAAGATAGGGAATCTCTCGTTCTTTTTGGGCGGGA
AAGCGTGGTATGGTAACGACAGGTGGAAGCCAGACATGCAGGCCGTTCGTGCGGCAATCAAGTTTGCGATGGCGA
CGAAGAGACTCGATGCGGACCAGCAGCCATCGACGAACTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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