Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8382
Gene name
LocationContig_543:7070..8041
Strand+
Gene length (bp)971
Transcript length (bp)888
Coding sequence length (bp)888
Protein length (aa) 296

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06912 DUF1275 Protein of unknown function (DUF1275) 7.8E-43 74 278

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.45

Transmembrane Domains

Domain # Start End Length
1 120 142 22
2 152 171 19
3 240 257 17
4 261 283 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8382
MLWRIPDRIATHIMVPDEKKKKTESAGQLFTDTSSAETTYSSRRHSSAAAGRRSRVLGHLTEDIRSSVFAEFQLV
LLTFCTGMQDATTFPDYHCFTSNQTGNTVFLCLALILPHLNGESFITANIGMALGLFLGAGWLTGQLSHTIGPRK
RWWLVLCNLIQTGLVLGAAAVQFRHGVRDRGSSALAAVGLLAAAAGSQVVQSRSLSMTEISTAMATAAWVDLIID
PRLFALQNRPRTRRVAFLLALVAGTLVGALIYREAGSATAIAVSGGGKLLVTVLFLFSPGDKQRQDPSQA*
Coding >Hirsu2|8382
ATGCTCTGGCGCATTCCCGATCGGATCGCAACGCACATAATGGTGCCGGACGAGAAGAAGAAGAAGACGGAGTCG
GCCGGCCAACTCTTCACAGACACCTCGTCGGCGGAAACGACGTACAGCAGTCGGCGGCACTCCTCCGCCGCCGCG
GGGCGCAGGAGTCGGGTCCTGGGCCACTTGACCGAAGACATCCGATCCTCCGTCTTTGCCGAGTTCCAGCTCGTG
CTCCTGACCTTTTGCACGGGCATGCAAGACGCCACCACCTTCCCCGACTACCACTGCTTCACCTCGAACCAGACC
GGCAACACCGTCTTCCTGTGCCTGGCCCTGATCCTACCCCATCTCAACGGCGAGAGCTTCATCACGGCCAACATC
GGCATGGCCCTGGGCCTGTTCCTGGGCGCCGGCTGGCTGACGGGCCAGCTGAGCCATACCATCGGGCCGCGGAAG
CGCTGGTGGCTCGTCCTGTGCAACCTGATCCAGACGGGCCTGGTCCTGGGCGCCGCCGCCGTGCAGTTCCGTCAC
GGCGTCCGGGACCGCGGGTCCTCGGCCCTGGCCGCCGTCGGCCTGCTGGCCGCGGCCGCCGGCAGCCAGGTGGTG
CAGTCGCGCAGCCTGTCCATGACGGAGATCAGCACCGCCATGGCTACGGCCGCATGGGTCGACCTCATCATCGAC
CCCAGGCTCTTCGCCCTGCAGAACCGGCCAAGGACACGTCGCGTGGCCTTTCTGCTGGCCCTGGTCGCCGGCACC
CTCGTCGGCGCGCTCATCTACCGCGAGGCCGGCTCGGCAACGGCCATCGCCGTTTCCGGAGGCGGCAAGCTCCTC
GTCACTGTGCTTTTCCTGTTCTCTCCGGGTGACAAGCAGCGGCAGGACCCGTCCCAGGCATGA
Transcript >Hirsu2|8382
ATGCTCTGGCGCATTCCCGATCGGATCGCAACGCACATAATGGTGCCGGACGAGAAGAAGAAGAAGACGGAGTCG
GCCGGCCAACTCTTCACAGACACCTCGTCGGCGGAAACGACGTACAGCAGTCGGCGGCACTCCTCCGCCGCCGCG
GGGCGCAGGAGTCGGGTCCTGGGCCACTTGACCGAAGACATCCGATCCTCCGTCTTTGCCGAGTTCCAGCTCGTG
CTCCTGACCTTTTGCACGGGCATGCAAGACGCCACCACCTTCCCCGACTACCACTGCTTCACCTCGAACCAGACC
GGCAACACCGTCTTCCTGTGCCTGGCCCTGATCCTACCCCATCTCAACGGCGAGAGCTTCATCACGGCCAACATC
GGCATGGCCCTGGGCCTGTTCCTGGGCGCCGGCTGGCTGACGGGCCAGCTGAGCCATACCATCGGGCCGCGGAAG
CGCTGGTGGCTCGTCCTGTGCAACCTGATCCAGACGGGCCTGGTCCTGGGCGCCGCCGCCGTGCAGTTCCGTCAC
GGCGTCCGGGACCGCGGGTCCTCGGCCCTGGCCGCCGTCGGCCTGCTGGCCGCGGCCGCCGGCAGCCAGGTGGTG
CAGTCGCGCAGCCTGTCCATGACGGAGATCAGCACCGCCATGGCTACGGCCGCATGGGTCGACCTCATCATCGAC
CCCAGGCTCTTCGCCCTGCAGAACCGGCCAAGGACACGTCGCGTGGCCTTTCTGCTGGCCCTGGTCGCCGGCACC
CTCGTCGGCGCGCTCATCTACCGCGAGGCCGGCTCGGCAACGGCCATCGCCGTTTCCGGAGGCGGCAAGCTCCTC
GTCACTGTGCTTTTCCTGTTCTCTCCGGGTGACAAGCAGCGGCAGGACCCGTCCCAGGCATGA
Gene >Hirsu2|8382
ATGCTCTGGCGCATTCCCGATCGGATCGCAACGCACATAATGGTGCCGGACGAGAAGAAGAAGAAGACGGAGTCG
GCCGGCCAACTCTTCACAGACACCTCGTCGGCGGAAACGACGTACAGCAGTCGGCGGCACTCCTCCGCCGCCGCG
GGGCGCAGGAGTCGGGTCCTGGGCCACTTGACCGAAGACATCCGATCCTCCGTCTTTGCCGAGTTCCAGCTCGTG
CTCCTGACCTTTTGCACGGGCATGCAAGGTGAGGGCCTATGCGGCCGCAGACGGCCGCTGATCCGTCGTGTCGCC
TGTCCCGACGAGCTGACCGAGACATCTGCCATCAAGACGCCACCACCTTCCCCGACTACCACTGCTTCACCTCGA
ACCAGACCGGCAACACCGTCTTCCTGTGCCTGGCCCTGATCCTACCCCATCTCAACGGCGAGAGCTTCATCACGG
CCAACATCGGCATGGCCCTGGGCCTGTTCCTGGGCGCCGGCTGGCTGACGGGCCAGCTGAGCCATACCATCGGGC
CGCGGAAGCGCTGGTGGCTCGTCCTGTGCAACCTGATCCAGACGGGCCTGGTCCTGGGCGCCGCCGCCGTGCAGT
TCCGTCACGGCGTCCGGGACCGCGGGTCCTCGGCCCTGGCCGCCGTCGGCCTGCTGGCCGCGGCCGCCGGCAGCC
AGGTGGTGCAGTCGCGCAGCCTGTCCATGACGGAGATCAGCACCGCCATGGCTACGGCCGCATGGGTCGACCTCA
TCATCGACCCCAGGCTCTTCGCCCTGCAGAACCGGCCAAGGACACGTCGCGTGGCCTTTCTGCTGGCCCTGGTCG
CCGGCACCCTCGTCGGCGCGCTCATCTACCGCGAGGCCGGCTCGGCAACGGCCATCGCCGTTTCCGGAGGCGGCA
AGCTCCTCGTCACTGTGCTTTTCCTGTTCTCTCCGGGTGACAAGCAGCGGCAGGACCCGTCCCAGGCATGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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