Protein ID | Hirsu2|8382 |
Gene name | |
Location | Contig_543:7070..8041 |
Strand | + |
Gene length (bp) | 971 |
Transcript length (bp) | 888 |
Coding sequence length (bp) | 888 |
Protein length (aa) | 296 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06912 | DUF1275 | Protein of unknown function (DUF1275) | 6.1E-43 | 74 | 278 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 17 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 120 | 142 | 22 |
2 | 152 | 171 | 19 |
3 | 240 | 257 | 17 |
4 | 261 | 283 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|8382 MLWRIPDRIATHIMVPDEKKKKTESAGQLFTDTSSAETTYSSRRHSSAAAGRRSRVLGHLTEDIRSSVFAEFQLV LLTFCTGMQDATTFPDYHCFTSNQTGNTVFLCLALILPHLNGESFITANIGMALGLFLGAGWLTGQLSHTIGPRK RWWLVLCNLIQTGLVLGAAAVQFRHGVRDRGSSALAAVGLLAAAAGSQVVQSRSLSMTEISTAMATAAWVDLIID PRLFALQNRPRTRRVAFLLALVAGTLVGALIYREAGSATAIAVSGGGKLLVTVLFLFSPGDKQRQDPSQA* |
Coding | >Hirsu2|8382 ATGCTCTGGCGCATTCCCGATCGGATCGCAACGCACATAATGGTGCCGGACGAGAAGAAGAAGAAGACGGAGTCG GCCGGCCAACTCTTCACAGACACCTCGTCGGCGGAAACGACGTACAGCAGTCGGCGGCACTCCTCCGCCGCCGCG GGGCGCAGGAGTCGGGTCCTGGGCCACTTGACCGAAGACATCCGATCCTCCGTCTTTGCCGAGTTCCAGCTCGTG CTCCTGACCTTTTGCACGGGCATGCAAGACGCCACCACCTTCCCCGACTACCACTGCTTCACCTCGAACCAGACC GGCAACACCGTCTTCCTGTGCCTGGCCCTGATCCTACCCCATCTCAACGGCGAGAGCTTCATCACGGCCAACATC GGCATGGCCCTGGGCCTGTTCCTGGGCGCCGGCTGGCTGACGGGCCAGCTGAGCCATACCATCGGGCCGCGGAAG CGCTGGTGGCTCGTCCTGTGCAACCTGATCCAGACGGGCCTGGTCCTGGGCGCCGCCGCCGTGCAGTTCCGTCAC GGCGTCCGGGACCGCGGGTCCTCGGCCCTGGCCGCCGTCGGCCTGCTGGCCGCGGCCGCCGGCAGCCAGGTGGTG CAGTCGCGCAGCCTGTCCATGACGGAGATCAGCACCGCCATGGCTACGGCCGCATGGGTCGACCTCATCATCGAC CCCAGGCTCTTCGCCCTGCAGAACCGGCCAAGGACACGTCGCGTGGCCTTTCTGCTGGCCCTGGTCGCCGGCACC CTCGTCGGCGCGCTCATCTACCGCGAGGCCGGCTCGGCAACGGCCATCGCCGTTTCCGGAGGCGGCAAGCTCCTC GTCACTGTGCTTTTCCTGTTCTCTCCGGGTGACAAGCAGCGGCAGGACCCGTCCCAGGCATGA |
Transcript | >Hirsu2|8382 ATGCTCTGGCGCATTCCCGATCGGATCGCAACGCACATAATGGTGCCGGACGAGAAGAAGAAGAAGACGGAGTCG GCCGGCCAACTCTTCACAGACACCTCGTCGGCGGAAACGACGTACAGCAGTCGGCGGCACTCCTCCGCCGCCGCG GGGCGCAGGAGTCGGGTCCTGGGCCACTTGACCGAAGACATCCGATCCTCCGTCTTTGCCGAGTTCCAGCTCGTG CTCCTGACCTTTTGCACGGGCATGCAAGACGCCACCACCTTCCCCGACTACCACTGCTTCACCTCGAACCAGACC GGCAACACCGTCTTCCTGTGCCTGGCCCTGATCCTACCCCATCTCAACGGCGAGAGCTTCATCACGGCCAACATC GGCATGGCCCTGGGCCTGTTCCTGGGCGCCGGCTGGCTGACGGGCCAGCTGAGCCATACCATCGGGCCGCGGAAG CGCTGGTGGCTCGTCCTGTGCAACCTGATCCAGACGGGCCTGGTCCTGGGCGCCGCCGCCGTGCAGTTCCGTCAC GGCGTCCGGGACCGCGGGTCCTCGGCCCTGGCCGCCGTCGGCCTGCTGGCCGCGGCCGCCGGCAGCCAGGTGGTG CAGTCGCGCAGCCTGTCCATGACGGAGATCAGCACCGCCATGGCTACGGCCGCATGGGTCGACCTCATCATCGAC CCCAGGCTCTTCGCCCTGCAGAACCGGCCAAGGACACGTCGCGTGGCCTTTCTGCTGGCCCTGGTCGCCGGCACC CTCGTCGGCGCGCTCATCTACCGCGAGGCCGGCTCGGCAACGGCCATCGCCGTTTCCGGAGGCGGCAAGCTCCTC GTCACTGTGCTTTTCCTGTTCTCTCCGGGTGACAAGCAGCGGCAGGACCCGTCCCAGGCATGA |
Gene | >Hirsu2|8382 ATGCTCTGGCGCATTCCCGATCGGATCGCAACGCACATAATGGTGCCGGACGAGAAGAAGAAGAAGACGGAGTCG GCCGGCCAACTCTTCACAGACACCTCGTCGGCGGAAACGACGTACAGCAGTCGGCGGCACTCCTCCGCCGCCGCG GGGCGCAGGAGTCGGGTCCTGGGCCACTTGACCGAAGACATCCGATCCTCCGTCTTTGCCGAGTTCCAGCTCGTG CTCCTGACCTTTTGCACGGGCATGCAAGGTGAGGGCCTATGCGGCCGCAGACGGCCGCTGATCCGTCGTGTCGCC TGTCCCGACGAGCTGACCGAGACATCTGCCATCAAGACGCCACCACCTTCCCCGACTACCACTGCTTCACCTCGA ACCAGACCGGCAACACCGTCTTCCTGTGCCTGGCCCTGATCCTACCCCATCTCAACGGCGAGAGCTTCATCACGG CCAACATCGGCATGGCCCTGGGCCTGTTCCTGGGCGCCGGCTGGCTGACGGGCCAGCTGAGCCATACCATCGGGC CGCGGAAGCGCTGGTGGCTCGTCCTGTGCAACCTGATCCAGACGGGCCTGGTCCTGGGCGCCGCCGCCGTGCAGT TCCGTCACGGCGTCCGGGACCGCGGGTCCTCGGCCCTGGCCGCCGTCGGCCTGCTGGCCGCGGCCGCCGGCAGCC AGGTGGTGCAGTCGCGCAGCCTGTCCATGACGGAGATCAGCACCGCCATGGCTACGGCCGCATGGGTCGACCTCA TCATCGACCCCAGGCTCTTCGCCCTGCAGAACCGGCCAAGGACACGTCGCGTGGCCTTTCTGCTGGCCCTGGTCG CCGGCACCCTCGTCGGCGCGCTCATCTACCGCGAGGCCGGCTCGGCAACGGCCATCGCCGTTTCCGGAGGCGGCA AGCTCCTCGTCACTGTGCTTTTCCTGTTCTCTCCGGGTGACAAGCAGCGGCAGGACCCGTCCCAGGCATGA |