Protein ID | Hirsu2|8371 |
Gene name | |
Location | Contig_540:14089..15450 |
Strand | - |
Gene length (bp) | 1361 |
Transcript length (bp) | 1140 |
Coding sequence length (bp) | 1140 |
Protein length (aa) | 380 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12697 | Abhydrolase_6 | Alpha/beta hydrolase family | 6.2E-10 | 97 | 362 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.122 | 0.0782 | 0.9282 | 0.0706 | 0.142 | 0.0148 | 0.1355 | 0.314 | 0.0466 | 0.0024 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 17 | 0.999651 |
Orthofinder run ID | 4 |
Orthogroup | 870 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|8371 MVRSAIVWLALAAAATAGNKNCKEIGTHIKVEARNGVFALRVPQTEVEVTNFILKLTVQNGNYTDSILRDYKTVL QDYHLSGIYCEPDYGKTRGLQILTHGIGFDRSYWDHPWRNYQNSYVQAALDDGWSTLTWDRLGIGASAHAHPLTD LQLFTEIKALKQFTRYAKSADLAGGKYKDKKIVHVGHSFGAALTMGMTSESPELSDGIILTGFSQVPDFVSEFAL GGNFVSAQDVPNLRPHYKHGYLAPKSSIGVHQNFFAPDTFEPELLKFVTERGQPAAMGELLTIGSLPKQSNFNGP VMIVTGDKDIPFCGGNCHNTKAINGSAADLLELSRNNFKAASVFNTTIIKHAGHGLNLQHGALVTYRTILDFIGD NVKA* |
Coding | >Hirsu2|8371 ATGGTTCGATCGGCCATCGTCTGGCTGGCCCTGGCTGCCGCCGCCACCGCGGGCAACAAGAACTGCAAGGAAATC GGGACCCACATCAAGGTGGAGGCTCGGAACGGCGTCTTCGCCTTGAGGGTGCCCCAGACGGAGGTGGAGGTGACC AACTTCATCCTGAAGCTCACGGTGCAGAACGGCAACTATACAGACAGCATCCTCAGAGACTATAAGACGGTCCTC CAGGACTATCACCTCTCCGGCATCTACTGCGAGCCCGACTACGGCAAGACGCGGGGCCTTCAGATCCTCACGCAC GGCATCGGCTTCGACCGCTCCTACTGGGACCACCCGTGGCGGAACTACCAGAACAGCTACGTGCAGGCGGCTCTG GACGATGGCTGGTCGACCCTGACCTGGGACCGGCTCGGCATCGGCGCCTCGGCGCACGCCCATCCCCTGACCGAT CTGCAGCTCTTCACCGAGATCAAGGCGCTCAAGCAGTTCACCCGCTATGCCAAGTCGGCTGACCTGGCGGGCGGC AAGTACAAGGACAAGAAGATTGTCCACGTCGGCCACTCCTTCGGCGCCGCCCTGACCATGGGCATGACCAGCGAG TCGCCCGAGCTGAGCGACGGCATCATCCTCACCGGCTTCTCCCAGGTGCCCGACTTCGTCTCCGAGTTCGCCCTC GGCGGCAACTTCGTCTCCGCCCAGGACGTCCCCAACCTCCGGCCTCACTACAAGCACGGATATCTGGCCCCCAAG TCCAGCATCGGCGTCCACCAGAACTTCTTTGCCCCGGACACCTTCGAGCCGGAACTCCTCAAGTTCGTGACGGAA AGAGGCCAGCCTGCCGCAATGGGCGAGCTCCTCACCATCGGCTCCCTCCCCAAGCAGTCCAATTTCAACGGGCCC GTGATGATAGTCACTGGAGACAAGGATATCCCCTTCTGCGGCGGCAACTGCCATAACACAAAGGCCATCAACGGC AGCGCCGCCGACCTTCTCGAACTGTCAAGGAACAACTTCAAGGCCGCCTCCGTCTTCAACACGACCATTATCAAA CACGCCGGCCACGGACTCAACCTGCAGCACGGCGCGCTCGTGACCTACAGGACGATACTCGACTTCATCGGCGAC AACGTCAAAGCTTGA |
Transcript | >Hirsu2|8371 ATGGTTCGATCGGCCATCGTCTGGCTGGCCCTGGCTGCCGCCGCCACCGCGGGCAACAAGAACTGCAAGGAAATC GGGACCCACATCAAGGTGGAGGCTCGGAACGGCGTCTTCGCCTTGAGGGTGCCCCAGACGGAGGTGGAGGTGACC AACTTCATCCTGAAGCTCACGGTGCAGAACGGCAACTATACAGACAGCATCCTCAGAGACTATAAGACGGTCCTC CAGGACTATCACCTCTCCGGCATCTACTGCGAGCCCGACTACGGCAAGACGCGGGGCCTTCAGATCCTCACGCAC GGCATCGGCTTCGACCGCTCCTACTGGGACCACCCGTGGCGGAACTACCAGAACAGCTACGTGCAGGCGGCTCTG GACGATGGCTGGTCGACCCTGACCTGGGACCGGCTCGGCATCGGCGCCTCGGCGCACGCCCATCCCCTGACCGAT CTGCAGCTCTTCACCGAGATCAAGGCGCTCAAGCAGTTCACCCGCTATGCCAAGTCGGCTGACCTGGCGGGCGGC AAGTACAAGGACAAGAAGATTGTCCACGTCGGCCACTCCTTCGGCGCCGCCCTGACCATGGGCATGACCAGCGAG TCGCCCGAGCTGAGCGACGGCATCATCCTCACCGGCTTCTCCCAGGTGCCCGACTTCGTCTCCGAGTTCGCCCTC GGCGGCAACTTCGTCTCCGCCCAGGACGTCCCCAACCTCCGGCCTCACTACAAGCACGGATATCTGGCCCCCAAG TCCAGCATCGGCGTCCACCAGAACTTCTTTGCCCCGGACACCTTCGAGCCGGAACTCCTCAAGTTCGTGACGGAA AGAGGCCAGCCTGCCGCAATGGGCGAGCTCCTCACCATCGGCTCCCTCCCCAAGCAGTCCAATTTCAACGGGCCC GTGATGATAGTCACTGGAGACAAGGATATCCCCTTCTGCGGCGGCAACTGCCATAACACAAAGGCCATCAACGGC AGCGCCGCCGACCTTCTCGAACTGTCAAGGAACAACTTCAAGGCCGCCTCCGTCTTCAACACGACCATTATCAAA CACGCCGGCCACGGACTCAACCTGCAGCACGGCGCGCTCGTGACCTACAGGACGATACTCGACTTCATCGGCGAC AACGTCAAAGCTTGA |
Gene | >Hirsu2|8371 ATGGTTCGATCGGCCATCGTCTGGCTGGCCCTGGCTGCCGCCGCCACCGCGGGCAACAAGAACTGCAAGGAAATC GGGACCCACATCAAGGTGGAGGCTCGGAACGGCGTCTTCGCCTTGAGGGTGCCCCAGACGGAGGTGGAGGTGACC AACTTCATCCTGAAGCTCACGGTGCAGAACGGCAACTATACAGACAGCATCCTCAGAGACGTAAGTCGCGAGCAT CGATCCCAGCGGGACGAGGAGGAGGAGGGGAGGGAGGCCCAAAGGGCTCGCTGACGGCCCGGCTGCGCAGTATAA GACGGTCCTCCAGGACTATCACCTCTCCGGCATCTACTGCGAGCCCGACTACGGCAAGACGCGGGGCCTTCAGAT CCTCACGCACGGCATCGGCTTCGACCGCTCCTACTGGGACCACCCGTGGCGGAACTACCAGAACAGCTACGTGCA GGCGGCTCTGGACGATGGCTGGTCGACCCTGACCTGGGACCGGCTCGGCATCGGCGCCTCGGCGCACGCCCATCC CCTGACCGATCTGCAGCTCTTCACCGAGATCAAGGCGCTCAAGCAGTTCACCCGCTATGCCAAGTCGGCTGACCT GGCGGGCGGCAAGTACAAGGACAAGAAGATTGTCCACGTCGGCCACTCCTTCGGCGCCGCCCTGACCATGGGCAT GACCAGCGAGTCGCCCGAGCTGAGCGACGGCATCATCCTCACCGGCTTCTCCCAGGTGCCCGACTTCGTCTCCGA GTTCGCCCTCGGCGGCAACTTCGTCTCCGCCCAGGACGTCCCCAACCTCCGGCCTCACTACAAGCACGGATATCT GGCCCCCAAGTCCAGCATCGGCGTCCACCAGAACTTCTTTGCCCCGGACACCTTCGAGCCGGAACTCCTCAAGTT CGTGACGGAAAGAGGCCAGCCTGCCGCAATGGGCGAGCTCCTCACCATCGGCTCCCTCCCCAAGCAGTCCAATTT CAACGGGCCCGTGATGATAGTCACTGGAGGTATGAGCAAGCCCCCCCCCTTTCTCTTATATCTCTGCCCAGCCCC TTCACCCCTCGACCCCGCGGATCCCGATGAGGAACATATCGCCAGGGCCGTGGGTGTTGATGAGTCGACTGACCA ATCCCGATCCTGCAGACAAGGATATCCCCTTCTGCGGCGGCAACTGCCATAACACAAAGGCCATCAACGGCAGCG CCGCCGACCTTCTCGAACTGTCAAGGAACAACTTCAAGGCCGCCTCCGTCTTCAACACGACCATTATCAAACACG CCGGCCACGGACTCAACCTGCAGCACGGCGCGCTCGTGACCTACAGGACGATACTCGACTTCATCGGCGACAACG TCAAAGCTTGA |