Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8348
Gene name
LocationContig_539:14913..16412
Strand+
Gene length (bp)1499
Transcript length (bp)1290
Coding sequence length (bp)1290
Protein length (aa) 430

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 32 0.45

Transmembrane Domains

Domain # Start End Length
1 234 256 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8348
MASRPGRRRRGSFAMRRLWTMLVAAAPAAQAILVAPGSPCSSGCGNVLDSTSTADLVCSTGAYAGATGQLFQGCV
ECEMRSRFSNRNQSDVESMLYNLRYAVSYCLFGDPSNKQLVNTPCVTSKACGPFRDAIGYKNLSAQYQGFEYCQI
WPVGDDVDYKSCAECLQAAENFYLANFVTVLQAGCDQKPAPGVGLGLEGNLFSTDSVNITAPTPTASVNPAWFDQ
GPLDLGAKVGIAVGGLVLVLVVLGCAIVLNGKRRRRAFLRRLEAKYGHKSWPSPGARGEKAEPSRQPSRGWDDTP
VSQQPLRGWDDSPMTASTDRPYPKYFSPYSSQYNSPVSAHHSPSTQLLGIMEPLGGDEPAPSSPGGKGKLRQEAY
EMHQVDGAAASGSAADIPRAEAPVLSHPGYGRTSNSPARQYVPNEADVRPGTAL*
Coding >Hirsu2|8348
ATGGCCTCGCGCCCGGGTCGCCGGCGACGGGGCTCCTTCGCCATGCGGCGCCTCTGGACGATGCTCGTGGCGGCG
GCGCCGGCCGCGCAAGCCATCCTCGTCGCGCCCGGCTCGCCCTGCTCGTCCGGCTGCGGCAACGTGCTCGACTCG
ACCTCGACGGCCGACCTCGTCTGCAGCACGGGCGCCTACGCCGGCGCCACCGGCCAGCTCTTCCAGGGCTGCGTC
GAGTGCGAGATGCGCAGCCGCTTCTCCAACCGCAACCAGAGCGACGTCGAGTCGATGCTGTATAACCTGCGATAT
GCCGTCTCCTACTGCCTGTTCGGCGACCCCAGCAACAAGCAGCTCGTCAACACGCCGTGTGTCACCAGCAAGGCG
TGCGGCCCCTTCCGCGACGCCATCGGGTACAAGAACCTGTCGGCCCAGTACCAGGGCTTCGAGTACTGCCAGATC
TGGCCCGTCGGCGACGACGTCGACTACAAGAGCTGCGCCGAGTGCCTGCAGGCGGCCGAGAACTTTTATCTCGCA
AACTTCGTCACCGTTCTCCAGGCCGGCTGCGATCAGAAGCCGGCGCCCGGCGTCGGCCTGGGCCTCGAGGGCAAC
CTCTTCTCCACCGACTCGGTCAACATCACGGCCCCGACGCCGACGGCCAGCGTCAACCCGGCCTGGTTCGACCAG
GGCCCGCTCGATCTGGGGGCCAAGGTGGGCATCGCCGTCGGCGGCCTCGTCCTCGTCCTCGTCGTCCTCGGCTGC
GCCATCGTGCTCAACGGCAAGCGCAGGAGAAGGGCCTTCCTGCGGAGGCTCGAGGCCAAGTACGGCCACAAGAGC
TGGCCGTCGCCCGGCGCACGGGGCGAGAAGGCCGAGCCCAGCCGGCAGCCGTCCCGCGGCTGGGACGACACGCCC
GTCAGCCAGCAGCCGCTGCGAGGCTGGGACGACTCGCCCATGACGGCCAGCACCGACAGGCCGTACCCCAAGTAC
TTCTCGCCCTACTCGAGCCAGTACAACAGCCCCGTCAGCGCCCACCACAGCCCGAGCACGCAGCTGCTGGGCATC
ATGGAGCCCCTCGGCGGCGACGAGCCCGCCCCGTCGTCGCCGGGAGGCAAGGGCAAGCTCAGGCAGGAGGCCTAT
GAGATGCACCAGGTCGACGGCGCGGCAGCAAGCGGCAGCGCCGCCGACATCCCGCGGGCCGAGGCGCCCGTGCTG
AGCCACCCGGGCTACGGCAGGACCAGCAACAGCCCGGCGAGGCAGTATGTCCCGAACGAGGCCGATGTCAGGCCC
GGAACTGCCCTCTGA
Transcript >Hirsu2|8348
ATGGCCTCGCGCCCGGGTCGCCGGCGACGGGGCTCCTTCGCCATGCGGCGCCTCTGGACGATGCTCGTGGCGGCG
GCGCCGGCCGCGCAAGCCATCCTCGTCGCGCCCGGCTCGCCCTGCTCGTCCGGCTGCGGCAACGTGCTCGACTCG
ACCTCGACGGCCGACCTCGTCTGCAGCACGGGCGCCTACGCCGGCGCCACCGGCCAGCTCTTCCAGGGCTGCGTC
GAGTGCGAGATGCGCAGCCGCTTCTCCAACCGCAACCAGAGCGACGTCGAGTCGATGCTGTATAACCTGCGATAT
GCCGTCTCCTACTGCCTGTTCGGCGACCCCAGCAACAAGCAGCTCGTCAACACGCCGTGTGTCACCAGCAAGGCG
TGCGGCCCCTTCCGCGACGCCATCGGGTACAAGAACCTGTCGGCCCAGTACCAGGGCTTCGAGTACTGCCAGATC
TGGCCCGTCGGCGACGACGTCGACTACAAGAGCTGCGCCGAGTGCCTGCAGGCGGCCGAGAACTTTTATCTCGCA
AACTTCGTCACCGTTCTCCAGGCCGGCTGCGATCAGAAGCCGGCGCCCGGCGTCGGCCTGGGCCTCGAGGGCAAC
CTCTTCTCCACCGACTCGGTCAACATCACGGCCCCGACGCCGACGGCCAGCGTCAACCCGGCCTGGTTCGACCAG
GGCCCGCTCGATCTGGGGGCCAAGGTGGGCATCGCCGTCGGCGGCCTCGTCCTCGTCCTCGTCGTCCTCGGCTGC
GCCATCGTGCTCAACGGCAAGCGCAGGAGAAGGGCCTTCCTGCGGAGGCTCGAGGCCAAGTACGGCCACAAGAGC
TGGCCGTCGCCCGGCGCACGGGGCGAGAAGGCCGAGCCCAGCCGGCAGCCGTCCCGCGGCTGGGACGACACGCCC
GTCAGCCAGCAGCCGCTGCGAGGCTGGGACGACTCGCCCATGACGGCCAGCACCGACAGGCCGTACCCCAAGTAC
TTCTCGCCCTACTCGAGCCAGTACAACAGCCCCGTCAGCGCCCACCACAGCCCGAGCACGCAGCTGCTGGGCATC
ATGGAGCCCCTCGGCGGCGACGAGCCCGCCCCGTCGTCGCCGGGAGGCAAGGGCAAGCTCAGGCAGGAGGCCTAT
GAGATGCACCAGGTCGACGGCGCGGCAGCAAGCGGCAGCGCCGCCGACATCCCGCGGGCCGAGGCGCCCGTGCTG
AGCCACCCGGGCTACGGCAGGACCAGCAACAGCCCGGCGAGGCAGTATGTCCCGAACGAGGCCGATGTCAGGCCC
GGAACTGCCCTCTGA
Gene >Hirsu2|8348
ATGGCCTCGCGCCCGGGTCGCCGGCGACGGGGCTCCTTCGCCATGCGGCGCCTCTGGACGATGCTCGTGGCGGCG
GCGCCGGCCGCGCAAGCCATCCTCGTCGCGCCCGGCTCGCCCTGCTCGTCCGGCTGCGGCAACGTGCTCGACTCG
ACCTCGACGGCCGACCTCGTCTGCAGCACGGGCGCCTACGCCGGCGCCACCGGCCAGCTCTTCCAGGGCTGCGTC
GAGTGCGAGATGCGCAGCCGCTTCTCCAACCGCAACCAGAGCGACGTCGAGTCGATGCTGTGTATGCCCACGATG
CCCTCGTCGCCGACTGCGCTGACCTCGGGCCTCGGGCCAGATAACCTGCGATATGCCGTCTCCTACTGCCTGTTC
GGCGACCCCAGCAACAAGCAGCTCGTCAACACGCCGTGTGTCACCAGGTGCGGCGAGATCCGGCTGTCTCTCCAT
CCCCCGCCGATTCGCTTCGGGGACTGACGCCCGTGACGCTGCAGCAAGGCGTGCGGCCCCTTCCGCGACGCCATC
GGGTACAAGAACCTGTCGGCCCAGTACCAGGGCTTCGAGTACTGCCAGATCTGGCCCGTCGGCGACGACGTCGAC
TACAAGAGCTGCGCCGAGTGCCTGCAGGCGGCCGAGAACTTTTATCTCGCAAACTGTTCGTCCCTGCCGTCCCCT
TGTATCTCTCGACATACTGCTGCTATGGTCGTCGCTCACACGCGTCCGTTTCCCCCGATGCAGTCGTCACCGTTC
TCCAGGCCGGCTGCGATCAGAAGCCGGCGCCCGGCGTCGGCCTGGGCCTCGAGGGCAACCTCTTCTCCACCGACT
CGGTCAACATCACGGCCCCGACGCCGACGGCCAGCGTCAACCCGGCCTGGTTCGACCAGGGCCCGCTCGATCTGG
GGGCCAAGGTGGGCATCGCCGTCGGCGGCCTCGTCCTCGTCCTCGTCGTCCTCGGCTGCGCCATCGTGCTCAACG
GCAAGCGCAGGAGAAGGGCCTTCCTGCGGAGGCTCGAGGCCAAGTACGGCCACAAGAGCTGGCCGTCGCCCGGCG
CACGGGGCGAGAAGGCCGAGCCCAGCCGGCAGCCGTCCCGCGGCTGGGACGACACGCCCGTCAGCCAGCAGCCGC
TGCGAGGCTGGGACGACTCGCCCATGACGGCCAGCACCGACAGGCCGTACCCCAAGTACTTCTCGCCCTACTCGA
GCCAGTACAACAGCCCCGTCAGCGCCCACCACAGCCCGAGCACGCAGCTGCTGGGCATCATGGAGCCCCTCGGCG
GCGACGAGCCCGCCCCGTCGTCGCCGGGAGGCAAGGGCAAGCTCAGGCAGGAGGCCTATGAGATGCACCAGGTCG
ACGGCGCGGCAGCAAGCGGCAGCGCCGCCGACATCCCGCGGGCCGAGGCGCCCGTGCTGAGCCACCCGGGCTACG
GCAGGACCAGCAACAGCCCGGCGAGGCAGTATGTCCCGAACGAGGCCGATGTCAGGCCCGGAACTGCCCTCTGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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