Protein ID | Hirsu2|8348 |
Gene name | |
Location | Contig_539:14913..16412 |
Strand | + |
Gene length (bp) | 1499 |
Transcript length (bp) | 1290 |
Coding sequence length (bp) | 1290 |
Protein length (aa) | 430 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 32 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 234 | 256 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|8348 MASRPGRRRRGSFAMRRLWTMLVAAAPAAQAILVAPGSPCSSGCGNVLDSTSTADLVCSTGAYAGATGQLFQGCV ECEMRSRFSNRNQSDVESMLYNLRYAVSYCLFGDPSNKQLVNTPCVTSKACGPFRDAIGYKNLSAQYQGFEYCQI WPVGDDVDYKSCAECLQAAENFYLANFVTVLQAGCDQKPAPGVGLGLEGNLFSTDSVNITAPTPTASVNPAWFDQ GPLDLGAKVGIAVGGLVLVLVVLGCAIVLNGKRRRRAFLRRLEAKYGHKSWPSPGARGEKAEPSRQPSRGWDDTP VSQQPLRGWDDSPMTASTDRPYPKYFSPYSSQYNSPVSAHHSPSTQLLGIMEPLGGDEPAPSSPGGKGKLRQEAY EMHQVDGAAASGSAADIPRAEAPVLSHPGYGRTSNSPARQYVPNEADVRPGTAL* |
Coding | >Hirsu2|8348 ATGGCCTCGCGCCCGGGTCGCCGGCGACGGGGCTCCTTCGCCATGCGGCGCCTCTGGACGATGCTCGTGGCGGCG GCGCCGGCCGCGCAAGCCATCCTCGTCGCGCCCGGCTCGCCCTGCTCGTCCGGCTGCGGCAACGTGCTCGACTCG ACCTCGACGGCCGACCTCGTCTGCAGCACGGGCGCCTACGCCGGCGCCACCGGCCAGCTCTTCCAGGGCTGCGTC GAGTGCGAGATGCGCAGCCGCTTCTCCAACCGCAACCAGAGCGACGTCGAGTCGATGCTGTATAACCTGCGATAT GCCGTCTCCTACTGCCTGTTCGGCGACCCCAGCAACAAGCAGCTCGTCAACACGCCGTGTGTCACCAGCAAGGCG TGCGGCCCCTTCCGCGACGCCATCGGGTACAAGAACCTGTCGGCCCAGTACCAGGGCTTCGAGTACTGCCAGATC TGGCCCGTCGGCGACGACGTCGACTACAAGAGCTGCGCCGAGTGCCTGCAGGCGGCCGAGAACTTTTATCTCGCA AACTTCGTCACCGTTCTCCAGGCCGGCTGCGATCAGAAGCCGGCGCCCGGCGTCGGCCTGGGCCTCGAGGGCAAC CTCTTCTCCACCGACTCGGTCAACATCACGGCCCCGACGCCGACGGCCAGCGTCAACCCGGCCTGGTTCGACCAG GGCCCGCTCGATCTGGGGGCCAAGGTGGGCATCGCCGTCGGCGGCCTCGTCCTCGTCCTCGTCGTCCTCGGCTGC GCCATCGTGCTCAACGGCAAGCGCAGGAGAAGGGCCTTCCTGCGGAGGCTCGAGGCCAAGTACGGCCACAAGAGC TGGCCGTCGCCCGGCGCACGGGGCGAGAAGGCCGAGCCCAGCCGGCAGCCGTCCCGCGGCTGGGACGACACGCCC GTCAGCCAGCAGCCGCTGCGAGGCTGGGACGACTCGCCCATGACGGCCAGCACCGACAGGCCGTACCCCAAGTAC TTCTCGCCCTACTCGAGCCAGTACAACAGCCCCGTCAGCGCCCACCACAGCCCGAGCACGCAGCTGCTGGGCATC ATGGAGCCCCTCGGCGGCGACGAGCCCGCCCCGTCGTCGCCGGGAGGCAAGGGCAAGCTCAGGCAGGAGGCCTAT GAGATGCACCAGGTCGACGGCGCGGCAGCAAGCGGCAGCGCCGCCGACATCCCGCGGGCCGAGGCGCCCGTGCTG AGCCACCCGGGCTACGGCAGGACCAGCAACAGCCCGGCGAGGCAGTATGTCCCGAACGAGGCCGATGTCAGGCCC GGAACTGCCCTCTGA |
Transcript | >Hirsu2|8348 ATGGCCTCGCGCCCGGGTCGCCGGCGACGGGGCTCCTTCGCCATGCGGCGCCTCTGGACGATGCTCGTGGCGGCG GCGCCGGCCGCGCAAGCCATCCTCGTCGCGCCCGGCTCGCCCTGCTCGTCCGGCTGCGGCAACGTGCTCGACTCG ACCTCGACGGCCGACCTCGTCTGCAGCACGGGCGCCTACGCCGGCGCCACCGGCCAGCTCTTCCAGGGCTGCGTC GAGTGCGAGATGCGCAGCCGCTTCTCCAACCGCAACCAGAGCGACGTCGAGTCGATGCTGTATAACCTGCGATAT GCCGTCTCCTACTGCCTGTTCGGCGACCCCAGCAACAAGCAGCTCGTCAACACGCCGTGTGTCACCAGCAAGGCG TGCGGCCCCTTCCGCGACGCCATCGGGTACAAGAACCTGTCGGCCCAGTACCAGGGCTTCGAGTACTGCCAGATC TGGCCCGTCGGCGACGACGTCGACTACAAGAGCTGCGCCGAGTGCCTGCAGGCGGCCGAGAACTTTTATCTCGCA AACTTCGTCACCGTTCTCCAGGCCGGCTGCGATCAGAAGCCGGCGCCCGGCGTCGGCCTGGGCCTCGAGGGCAAC CTCTTCTCCACCGACTCGGTCAACATCACGGCCCCGACGCCGACGGCCAGCGTCAACCCGGCCTGGTTCGACCAG GGCCCGCTCGATCTGGGGGCCAAGGTGGGCATCGCCGTCGGCGGCCTCGTCCTCGTCCTCGTCGTCCTCGGCTGC GCCATCGTGCTCAACGGCAAGCGCAGGAGAAGGGCCTTCCTGCGGAGGCTCGAGGCCAAGTACGGCCACAAGAGC TGGCCGTCGCCCGGCGCACGGGGCGAGAAGGCCGAGCCCAGCCGGCAGCCGTCCCGCGGCTGGGACGACACGCCC GTCAGCCAGCAGCCGCTGCGAGGCTGGGACGACTCGCCCATGACGGCCAGCACCGACAGGCCGTACCCCAAGTAC TTCTCGCCCTACTCGAGCCAGTACAACAGCCCCGTCAGCGCCCACCACAGCCCGAGCACGCAGCTGCTGGGCATC ATGGAGCCCCTCGGCGGCGACGAGCCCGCCCCGTCGTCGCCGGGAGGCAAGGGCAAGCTCAGGCAGGAGGCCTAT GAGATGCACCAGGTCGACGGCGCGGCAGCAAGCGGCAGCGCCGCCGACATCCCGCGGGCCGAGGCGCCCGTGCTG AGCCACCCGGGCTACGGCAGGACCAGCAACAGCCCGGCGAGGCAGTATGTCCCGAACGAGGCCGATGTCAGGCCC GGAACTGCCCTCTGA |
Gene | >Hirsu2|8348 ATGGCCTCGCGCCCGGGTCGCCGGCGACGGGGCTCCTTCGCCATGCGGCGCCTCTGGACGATGCTCGTGGCGGCG GCGCCGGCCGCGCAAGCCATCCTCGTCGCGCCCGGCTCGCCCTGCTCGTCCGGCTGCGGCAACGTGCTCGACTCG ACCTCGACGGCCGACCTCGTCTGCAGCACGGGCGCCTACGCCGGCGCCACCGGCCAGCTCTTCCAGGGCTGCGTC GAGTGCGAGATGCGCAGCCGCTTCTCCAACCGCAACCAGAGCGACGTCGAGTCGATGCTGTGTATGCCCACGATG CCCTCGTCGCCGACTGCGCTGACCTCGGGCCTCGGGCCAGATAACCTGCGATATGCCGTCTCCTACTGCCTGTTC GGCGACCCCAGCAACAAGCAGCTCGTCAACACGCCGTGTGTCACCAGGTGCGGCGAGATCCGGCTGTCTCTCCAT CCCCCGCCGATTCGCTTCGGGGACTGACGCCCGTGACGCTGCAGCAAGGCGTGCGGCCCCTTCCGCGACGCCATC GGGTACAAGAACCTGTCGGCCCAGTACCAGGGCTTCGAGTACTGCCAGATCTGGCCCGTCGGCGACGACGTCGAC TACAAGAGCTGCGCCGAGTGCCTGCAGGCGGCCGAGAACTTTTATCTCGCAAACTGTTCGTCCCTGCCGTCCCCT TGTATCTCTCGACATACTGCTGCTATGGTCGTCGCTCACACGCGTCCGTTTCCCCCGATGCAGTCGTCACCGTTC TCCAGGCCGGCTGCGATCAGAAGCCGGCGCCCGGCGTCGGCCTGGGCCTCGAGGGCAACCTCTTCTCCACCGACT CGGTCAACATCACGGCCCCGACGCCGACGGCCAGCGTCAACCCGGCCTGGTTCGACCAGGGCCCGCTCGATCTGG GGGCCAAGGTGGGCATCGCCGTCGGCGGCCTCGTCCTCGTCCTCGTCGTCCTCGGCTGCGCCATCGTGCTCAACG GCAAGCGCAGGAGAAGGGCCTTCCTGCGGAGGCTCGAGGCCAAGTACGGCCACAAGAGCTGGCCGTCGCCCGGCG CACGGGGCGAGAAGGCCGAGCCCAGCCGGCAGCCGTCCCGCGGCTGGGACGACACGCCCGTCAGCCAGCAGCCGC TGCGAGGCTGGGACGACTCGCCCATGACGGCCAGCACCGACAGGCCGTACCCCAAGTACTTCTCGCCCTACTCGA GCCAGTACAACAGCCCCGTCAGCGCCCACCACAGCCCGAGCACGCAGCTGCTGGGCATCATGGAGCCCCTCGGCG GCGACGAGCCCGCCCCGTCGTCGCCGGGAGGCAAGGGCAAGCTCAGGCAGGAGGCCTATGAGATGCACCAGGTCG ACGGCGCGGCAGCAAGCGGCAGCGCCGCCGACATCCCGCGGGCCGAGGCGCCCGTGCTGAGCCACCCGGGCTACG GCAGGACCAGCAACAGCCCGGCGAGGCAGTATGTCCCGAACGAGGCCGATGTCAGGCCCGGAACTGCCCTCTGA |