© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|8315 |
| Gene name | |
| Location | Contig_534:11056..11610 |
| Strand | - |
| Gene length (bp) | 554 |
| Transcript length (bp) | 435 |
| Coding sequence length (bp) | 435 |
| Protein length (aa) | 145 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10601 | zf-LITAF-like | LITAF-like zinc ribbon domain | 1.5E-14 | 56 | 123 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 16 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 84 | 106 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|8315 MATPSQDASVGPAQALKMPADSTQTKAQANKADSGQAKPVTKPQKVSSLHQLGDGGPQWIDCPFCQQRAPVTIRR VGTAMQTMAALLFCMFCCVCLTCVPFLAHWFENTEYVCSNCDTVVAIRPHDGPMQLFDGRQTGPPLVPS* |
| Coding | >Hirsu2|8315 ATGGCGACTCCGAGCCAGGACGCTTCGGTCGGTCCCGCGCAAGCCCTGAAGATGCCGGCAGACTCGACACAGACG AAAGCGCAGGCGAACAAGGCCGACAGCGGCCAGGCCAAGCCCGTCACCAAGCCGCAAAAGGTGTCGTCGCTGCAC CAGCTCGGCGACGGGGGGCCGCAGTGGATCGACTGCCCCTTCTGCCAGCAGCGGGCGCCGGTGACGATCAGGCGG GTGGGCACGGCGATGCAGACCATGGCGGCGTTGCTGTTCTGCATGTTCTGCTGCGTGTGCCTGACCTGTGTGCCC TTTCTGGCCCACTGGTTCGAGAACACCGAGTACGTCTGCTCCAACTGCGACACGGTGGTGGCGATTCGGCCGCAC GACGGCCCGATGCAGTTGTTCGACGGACGGCAGACGGGCCCGCCGCTGGTGCCATCTTAG |
| Transcript | >Hirsu2|8315 ATGGCGACTCCGAGCCAGGACGCTTCGGTCGGTCCCGCGCAAGCCCTGAAGATGCCGGCAGACTCGACACAGACG AAAGCGCAGGCGAACAAGGCCGACAGCGGCCAGGCCAAGCCCGTCACCAAGCCGCAAAAGGTGTCGTCGCTGCAC CAGCTCGGCGACGGGGGGCCGCAGTGGATCGACTGCCCCTTCTGCCAGCAGCGGGCGCCGGTGACGATCAGGCGG GTGGGCACGGCGATGCAGACCATGGCGGCGTTGCTGTTCTGCATGTTCTGCTGCGTGTGCCTGACCTGTGTGCCC TTTCTGGCCCACTGGTTCGAGAACACCGAGTACGTCTGCTCCAACTGCGACACGGTGGTGGCGATTCGGCCGCAC GACGGCCCGATGCAGTTGTTCGACGGACGGCAGACGGGCCCGCCGCTGGTGCCATCTTAG |
| Gene | >Hirsu2|8315 ATGGCGACTCCGAGCCAGGACGCTTCGGTCGGTCCCGCGCAAGCCCTGAAGATGCCGGCAGACTCGACACAGACG AAAGCGTCAGTCCCCCCGGGCTCCTTCGCAGTCCGTGGAGCTGACAGGTGCCGCACAGGCAGGCGAACAAGGCCG ACAGCGGCCAGGCCAAGCCCGTCACCAAGCCGCAAAAGGTGTCGTCGCTGCACCAGCTCGGCGACGGGGGGCCGC AGTGGATCGACTGCCCCTTCTGCCAGCAGCGGGCGCCGGTGACGATCAGGCGGGTGGGCACGGCGATGCAGACGT GAGCAGAGCAGAGGCGGCGCGCCTGAGGCTGGCCCGGGTTCGGATGCTGACGCGGTCTGGTCAGCATGGCGGCGT TGCTGTTCTGCATGTTCTGCTGCGTGTGCCTGACCTGTGTGCCCTTTCTGGCCCACTGGTTCGAGAACACCGAGT ACGTCTGCTCCAACTGCGACACGGTGGTGGCGATTCGGCCGCACGACGGCCCGATGCAGTTGTTCGACGGACGGC AGACGGGCCCGCCGCTGGTGCCATCTTAG |