Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8307
Gene name
LocationContig_533:9022..9424
Strand-
Gene length (bp)402
Transcript length (bp)402
Coding sequence length (bp)402
Protein length (aa) 134

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus|Extracellular Nuclear localization signal 0.4789 0.6561 0.783 0.1075 0.1118 0.0329 0.0382 0.3066 0.11 0.0196

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup58
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4910
Ophiocordyceps camponoti-floridani Ophcf2|06958
Ophiocordyceps camponoti-rufipedis Ophun1|4560
Ophiocordyceps camponoti-rufipedis Ophun1|3608
Ophiocordyceps camponoti-rufipedis Ophun1|3607
Ophiocordyceps camponoti-rufipedis Ophun1|3606
Ophiocordyceps camponoti-rufipedis Ophun1|1918
Ophiocordyceps camponoti-rufipedis Ophun1|4301
Ophiocordyceps kimflemingae Ophio5|7704
Ophiocordyceps subramaniannii Hirsu2|299
Ophiocordyceps subramaniannii Hirsu2|8307 (this protein)
Ophiocordyceps subramaniannii Hirsu2|8186
Ophiocordyceps subramaniannii Hirsu2|7741
Ophiocordyceps subramaniannii Hirsu2|7709
Ophiocordyceps subramaniannii Hirsu2|5174
Ophiocordyceps subramaniannii Hirsu2|4474
Ophiocordyceps subramaniannii Hirsu2|3083
Ophiocordyceps subramaniannii Hirsu2|86
Ophiocordyceps subramaniannii Hirsu2|8924

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8307
MAVGILKSQRHTYRHDLEPFRYVFLCAVITNHAEDPPKASRLRKWSRGGWDELAERKSLDMDHDGFQHLLQEFPP
DFHSLKPLAEALRKILFPLRDGIIWTGTDGSHEAAEKLCDGMIGAFQEAIYSEAEQSR*
Coding >Hirsu2|8307
ATGGCCGTCGGCATCCTCAAGAGCCAGCGCCATACCTATCGACACGACCTCGAGCCCTTCCGCTACGTCTTCCTG
TGTGCCGTCATAACGAACCACGCCGAGGACCCCCCTAAGGCGAGCAGGCTCCGGAAATGGAGTAGGGGGGGCTGG
GACGAACTGGCCGAACGCAAGTCTCTCGACATGGATCACGACGGCTTTCAGCATCTCCTGCAAGAATTTCCCCCC
GACTTCCATTCTCTCAAGCCATTGGCCGAGGCTTTACGCAAGATCCTGTTTCCCCTACGCGATGGCATCATCTGG
ACAGGCACCGACGGCTCACACGAAGCGGCAGAAAAGCTCTGTGATGGGATGATCGGCGCATTTCAAGAGGCCATC
TATTCCGAGGCTGAACAATCGAGGTAG
Transcript >Hirsu2|8307
ATGGCCGTCGGCATCCTCAAGAGCCAGCGCCATACCTATCGACACGACCTCGAGCCCTTCCGCTACGTCTTCCTG
TGTGCCGTCATAACGAACCACGCCGAGGACCCCCCTAAGGCGAGCAGGCTCCGGAAATGGAGTAGGGGGGGCTGG
GACGAACTGGCCGAACGCAAGTCTCTCGACATGGATCACGACGGCTTTCAGCATCTCCTGCAAGAATTTCCCCCC
GACTTCCATTCTCTCAAGCCATTGGCCGAGGCTTTACGCAAGATCCTGTTTCCCCTACGCGATGGCATCATCTGG
ACAGGCACCGACGGCTCACACGAAGCGGCAGAAAAGCTCTGTGATGGGATGATCGGCGCATTTCAAGAGGCCATC
TATTCCGAGGCTGAACAATCGAGGTAG
Gene >Hirsu2|8307
ATGGCCGTCGGCATCCTCAAGAGCCAGCGCCATACCTATCGACACGACCTCGAGCCCTTCCGCTACGTCTTCCTG
TGTGCCGTCATAACGAACCACGCCGAGGACCCCCCTAAGGCGAGCAGGCTCCGGAAATGGAGTAGGGGGGGCTGG
GACGAACTGGCCGAACGCAAGTCTCTCGACATGGATCACGACGGCTTTCAGCATCTCCTGCAAGAATTTCCCCCC
GACTTCCATTCTCTCAAGCCATTGGCCGAGGCTTTACGCAAGATCCTGTTTCCCCTACGCGATGGCATCATCTGG
ACAGGCACCGACGGCTCACACGAAGCGGCAGAAAAGCTCTGTGATGGGATGATCGGCGCATTTCAAGAGGCCATC
TATTCCGAGGCTGAACAATCGAGGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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