Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8304
Gene name
LocationContig_533:4873..5374
Strand+
Gene length (bp)501
Transcript length (bp)261
Coding sequence length (bp)261
Protein length (aa) 87

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF15879 MWFE NADH-ubiquinone oxidoreductase MWFE subunit 6.9E-29 4 58

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 25 0.5

Transmembrane Domains

Domain # Start End Length
1 10 27 17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8304
MPVPFESLLPYAIMIGMFGVSGVGLSFMKKLKNDGKPPRWSVDEWDRQMMARDLRLTGSLRGQTDKPEAPPGFEF
SNGWKMEKRIS*
Coding >Hirsu2|8304
ATGCCGGTACCGTTCGAGTCTTTGCTTCCCTACGCCATCATGATTGGTATGTTTGGTGTATCTGGGGTCGGTCTG
TCATTCATGAAAAAATTGAAAAACGATGGCAAACCCCCGCGATGGTCGGTAGATGAATGGGACAGGCAAATGATG
GCACGCGACCTAAGACTCACGGGGTCGCTACGAGGGCAGACAGACAAGCCGGAGGCACCTCCAGGATTCGAGTTT
AGCAACGGATGGAAGATGGAGAAACGTATCAGTTAG
Transcript >Hirsu2|8304
ATGCCGGTACCGTTCGAGTCTTTGCTTCCCTACGCCATCATGATTGGTATGTTTGGTGTATCTGGGGTCGGTCTG
TCATTCATGAAAAAATTGAAAAACGATGGCAAACCCCCGCGATGGTCGGTAGATGAATGGGACAGGCAAATGATG
GCACGCGACCTAAGACTCACGGGGTCGCTACGAGGGCAGACAGACAAGCCGGAGGCACCTCCAGGATTCGAGTTT
AGCAACGGATGGAAGATGGAGAAACGTATCAGTTAG
Gene >Hirsu2|8304
ATGCCGGTACCGTTCGAGTCTTTGCTTCCCTACGCCATCATGATTGGTGTACGTGCTCGGCCATGTCCATAATCC
GTACGGAAATGGCCATGGCTCATCAACTTGCCAGATGTTTGGTGTATCTGGGGTCGGTCTGTCATTCATGAAAAA
ATTGAAAAACGATGGCAAACCCCCGCGATGGTCGGTAGATGAATGGGACAGGGTGCGTTGCCTTATCTCCCCTGG
CTTGATCACATTGGCTGACCTCGTCCGCAGCAAAGTAGGAGCCCTCCCGTCCTGAGACTACGCTGCATTATCGAA
CGATCACATGGCCGCTAATCATGTCAATGAAGTGATGGCACGCGACCTAAGACTCACGGGGTCGCTACGAGGGCA
GACAGACAAGCCGGAGGCACCTCCAGGATTCGAGTTTAGCAACGGATGGAAGGTAACAGCCTTGAAGCACTATCC
AAATACTTGCTTAGCTTACTTTCTACACAGATGGAGAAACGTATCAGTTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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