© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|8296 |
| Gene name | |
| Location | Contig_532:5347..6297 |
| Strand | + |
| Gene length (bp) | 950 |
| Transcript length (bp) | 855 |
| Coding sequence length (bp) | 855 |
| Protein length (aa) | 285 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.2668 | 0.1859 | 0.8434 | 0.1862 | 0.2313 | 0.1912 | 0.0787 | 0.1202 | 0.0959 | 0.0062 |
| Orthofinder run ID | 4 |
| Orthogroup | 7698 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|8296 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|8296 MRRLLMQAAAATTALAETLGSASFAISAQGLSRVIGARHDLESVRNLPQYKLALLCMGTAANGTVDPAAVRVALG AEQAPASDMDDIGRYLEEQCRSGDPTTHVKAVQEDVWSKPFEHKICKILAKADETLNYTVLGDIAETLGFKDPFS RKFGRFMGAMCGLDLPKRPNREYRPVNPTSLTPDPCQAAIFIRPDGSFDLPDGCGEDVGPGFGSNRPGANRPGRG SIGANHLGSENNSASGRGKRDTGPGTSAFGQSSPSRRHGVSSNFGGRNFGGGGSRRGSD* |
| Coding | >Hirsu2|8296 ATGCGGCGGCTACTCATGCAGGCCGCTGCGGCCACGACGGCCCTCGCCGAGACGCTCGGCAGCGCATCCTTCGCC ATCTCGGCCCAGGGCCTCAGCCGGGTCATCGGGGCCCGGCACGACCTGGAGTCGGTCCGAAACCTACCGCAGTAC AAGCTGGCCCTGCTCTGCATGGGCACCGCCGCCAACGGGACCGTTGACCCGGCCGCTGTCCGCGTCGCCCTCGGG GCGGAGCAGGCCCCGGCCTCGGACATGGACGACATCGGCCGCTACCTCGAGGAGCAGTGCCGGTCCGGCGACCCG ACGACCCACGTCAAGGCCGTGCAGGAGGACGTCTGGAGCAAGCCGTTCGAGCACAAGATCTGCAAGATCCTGGCC AAAGCCGACGAGACGCTCAACTACACCGTCCTCGGCGACATCGCCGAGACCCTGGGCTTCAAGGACCCCTTTTCC AGGAAGTTCGGCCGCTTCATGGGCGCCATGTGCGGACTCGACCTCCCCAAGAGACCCAACCGCGAATACAGGCCC GTCAACCCGACCAGCCTGACGCCGGATCCCTGCCAGGCCGCCATCTTCATCCGCCCCGACGGCTCCTTCGACCTG CCCGACGGCTGCGGCGAGGACGTCGGCCCCGGCTTCGGATCCAACCGGCCGGGCGCCAACCGGCCCGGACGCGGC TCCATCGGCGCCAACCACCTCGGCTCCGAAAACAATTCCGCTTCTGGCCGCGGCAAACGCGATACCGGCCCCGGC ACGTCGGCCTTCGGCCAGTCTAGTCCCAGCCGACGCCACGGCGTCTCGAGCAACTTTGGCGGCAGGAACTTTGGC GGAGGAGGCTCTCGCCGCGGCAGCGATTGA |
| Transcript | >Hirsu2|8296 ATGCGGCGGCTACTCATGCAGGCCGCTGCGGCCACGACGGCCCTCGCCGAGACGCTCGGCAGCGCATCCTTCGCC ATCTCGGCCCAGGGCCTCAGCCGGGTCATCGGGGCCCGGCACGACCTGGAGTCGGTCCGAAACCTACCGCAGTAC AAGCTGGCCCTGCTCTGCATGGGCACCGCCGCCAACGGGACCGTTGACCCGGCCGCTGTCCGCGTCGCCCTCGGG GCGGAGCAGGCCCCGGCCTCGGACATGGACGACATCGGCCGCTACCTCGAGGAGCAGTGCCGGTCCGGCGACCCG ACGACCCACGTCAAGGCCGTGCAGGAGGACGTCTGGAGCAAGCCGTTCGAGCACAAGATCTGCAAGATCCTGGCC AAAGCCGACGAGACGCTCAACTACACCGTCCTCGGCGACATCGCCGAGACCCTGGGCTTCAAGGACCCCTTTTCC AGGAAGTTCGGCCGCTTCATGGGCGCCATGTGCGGACTCGACCTCCCCAAGAGACCCAACCGCGAATACAGGCCC GTCAACCCGACCAGCCTGACGCCGGATCCCTGCCAGGCCGCCATCTTCATCCGCCCCGACGGCTCCTTCGACCTG CCCGACGGCTGCGGCGAGGACGTCGGCCCCGGCTTCGGATCCAACCGGCCGGGCGCCAACCGGCCCGGACGCGGC TCCATCGGCGCCAACCACCTCGGCTCCGAAAACAATTCCGCTTCTGGCCGCGGCAAACGCGATACCGGCCCCGGC ACGTCGGCCTTCGGCCAGTCTAGTCCCAGCCGACGCCACGGCGTCTCGAGCAACTTTGGCGGCAGGAACTTTGGC GGAGGAGGCTCTCGCCGCGGCAGCGATTGA |
| Gene | >Hirsu2|8296 ATGCGGCGGCTACTCATGCAGGCCGCTGCGGCCACGACGGCCCTCGCCGAGACGCTCGGCAGCGCATCCTTCGCC ATCTCGGCCCAGGGCCTCAGCCGGGTCATCGGGGCCCGGCACGACCTGGAGTCGGTCCGAAACCTACCGCAGTAC AAGCTGGCCCTGCTCTGCATGGGCACCGCCGCCAACGGGACCGTTGACCCGGCCGCTGTCCGCGTCGCCCTCGGG GCGGAGCAGGCCCCGGCCTCGGACATGGACGACATCGGCCGCTACCTCGAGGAGCAGTGCCGGTCCGGCGACCCG ACGACCCACGTCAAGGCCGTGCAGGAGGACGTCTGGAGCAAGCCGTTCGAGCACAAGATCTGCAAGATCCTGGCC AAAGCCGACGAGACGCTCAACTACACCGTCCTCGGCGACATCGCCGAGACCCTGGGCTTCAAGGACCCCTTTTCC AGGAAGTTCGGCCGCTTCATGGGCGCCATGTGCGGAGTGAGTGCCCCCCCGTCCTCTGTCCCCCCGGCCAGCAGC TCTCGCGTGGGGGAGATTCGCCGTGGACTGACAGCTGCCCATCCGCCTCGCAACAGCTCGACCTCCCCAAGAGAC CCAACCGCGAATACAGGCCCGTCAACCCGACCAGCCTGACGCCGGATCCCTGCCAGGCCGCCATCTTCATCCGCC CCGACGGCTCCTTCGACCTGCCCGACGGCTGCGGCGAGGACGTCGGCCCCGGCTTCGGATCCAACCGGCCGGGCG CCAACCGGCCCGGACGCGGCTCCATCGGCGCCAACCACCTCGGCTCCGAAAACAATTCCGCTTCTGGCCGCGGCA AACGCGATACCGGCCCCGGCACGTCGGCCTTCGGCCAGTCTAGTCCCAGCCGACGCCACGGCGTCTCGAGCAACT TTGGCGGCAGGAACTTTGGCGGAGGAGGCTCTCGCCGCGGCAGCGATTGA |