Protein ID | Hirsu2|8288 |
Gene name | |
Location | Contig_530:65..2308 |
Strand | + |
Gene length (bp) | 2243 |
Transcript length (bp) | 1608 |
Coding sequence length (bp) | 1608 |
Protein length (aa) | 536 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1479 | 0.0954 | 0.89 | 0.1041 | 0.0563 | 0.0203 | 0.2067 | 0.3746 | 0.2999 | 0.0093 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 20 | 0.999797 |
Orthofinder run ID | 4 |
Orthogroup | 104 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|8288 MHYAILWVATWIGYSQLAVAASIPNSVDDNDVDSSVLSKVPYTEGLTLGQGYNTYLQQGCMNGAVDVKGDASPSP QVQITYQADQITEYSKIAQELDISASLGISYLDSSAEVQSKFLNKATFEESHLTYIVRADVLRQPNSQHKYEFEW NKAKDPGTRYCDRFISVSGLDFIQGGALYARVSIKTKDSSKNQDLEVNAKTAFGMFGVDVTVDAAMKKSSDFLHE NSEIIVSWFWVGAPPDYGEHLKAVKEVDGNLLEIKNLSDKFIKEAGKHQWKRYAILERYDQIFNWNNEFQPLDYT EASERTWGVFNDYASYESMLQMVLKLELPEALEEQRKKLQEKVIQTKAAINDVTANPDASKQNPEYEAPENFFGT ILDTLSTPFIVQKVDYQYVQKWSSSLIDQELRKDQANATRLFEIGAFTFPGITGTVKLTFGNRPKLPWWDKTIDA PLPPEYVEQSHLWVFNQSQAGDFNRPVYIFEVIDSEHDWWDRLEISLNSSPPDQHVRGPDIFYTKLVQGQELDAG SERDEDNEIT* |
Coding | >Hirsu2|8288 ATGCATTACGCCATCCTTTGGGTAGCAACATGGATTGGATATTCTCAGCTGGCAGTTGCAGCTAGTATACCTAAT TCTGTTGACGATAACGATGTAGACTCCAGCGTCCTCTCTAAGGTCCCGTATACCGAGGGGTTGACTTTAGGCCAA GGATATAACACCTACCTTCAACAGGGCTGTATGAACGGAGCCGTGGATGTCAAGGGCGATGCTAGTCCGTCGCCT CAGGTCCAGATCACTTATCAAGCAGATCAAATCACAGAGTATTCGAAGATCGCTCAAGAACTTGACATTAGCGCC AGCCTGGGCATCTCGTATCTGGATAGCAGCGCCGAGGTCCAGTCTAAGTTTTTGAATAAGGCCACTTTCGAGGAA AGCCATTTAACGTACATCGTAAGAGCGGATGTGCTCCGCCAGCCAAACTCCCAGCACAAGTACGAGTTTGAATGG AACAAGGCTAAAGATCCAGGAACACGCTACTGTGATCGATTCATAAGCGTTAGTGGCTTAGACTTTATACAAGGC GGTGCCTTGTACGCCCGGGTATCGATCAAAACTAAGGACTCGTCAAAGAATCAAGATCTTGAGGTGAACGCTAAG ACGGCGTTCGGAATGTTCGGAGTCGATGTCACAGTTGATGCAGCTATGAAGAAGAGTTCCGATTTTCTCCATGAG AACTCAGAAATCATTGTCTCATGGTTTTGGGTGGGAGCGCCTCCTGATTATGGCGAACACCTGAAGGCCGTCAAG GAAGTCGACGGTAATCTATTGGAAATTAAGAATCTATCCGATAAGTTCATTAAAGAAGCCGGCAAGCACCAGTGG AAACGATACGCGATTCTTGAGCGGTACGATCAGATCTTTAACTGGAACAATGAGTTCCAACCTCTGGATTATACC GAAGCAAGTGAACGTACCTGGGGGGTTTTCAACGATTACGCAAGCTATGAAAGCATGCTCCAAATGGTACTAAAG CTTGAACTGCCCGAGGCTCTGGAGGAACAGAGAAAAAAGCTGCAGGAGAAGGTTATCCAAACTAAAGCCGCAATC AATGATGTTACTGCAAACCCGGACGCATCCAAACAGAACCCGGAGTATGAAGCTCCGGAGAACTTTTTTGGAACT ATCCTGGACACATTATCGACTCCGTTCATTGTCCAAAAAGTAGACTACCAATATGTCCAAAAATGGTCCAGTTCC CTTATCGATCAAGAGCTCCGTAAAGATCAAGCCAATGCAACTAGACTTTTCGAGATTGGAGCATTTACGTTCCCT GGCATTACCGGTACTGTAAAGCTTACATTTGGAAACAGGCCAAAATTGCCCTGGTGGGATAAGACCATTGACGCA CCATTGCCCCCTGAATATGTCGAGCAAAGTCATTTATGGGTCTTCAATCAGTCTCAAGCAGGAGATTTCAATCGG CCAGTGTATATCTTCGAAGTCATTGACTCGGAACACGATTGGTGGGATAGGCTCGAAATTTCCCTGAATTCATCG CCGCCGGACCAGCATGTGAGGGGCCCCGATATCTTCTACACGAAGCTAGTTCAGGGCCAAGAATTAGACGCTGGC TCGGAGCGAGATGAGGATAACGAAATCACCTAG |
Transcript | >Hirsu2|8288 ATGCATTACGCCATCCTTTGGGTAGCAACATGGATTGGATATTCTCAGCTGGCAGTTGCAGCTAGTATACCTAAT TCTGTTGACGATAACGATGTAGACTCCAGCGTCCTCTCTAAGGTCCCGTATACCGAGGGGTTGACTTTAGGCCAA GGATATAACACCTACCTTCAACAGGGCTGTATGAACGGAGCCGTGGATGTCAAGGGCGATGCTAGTCCGTCGCCT CAGGTCCAGATCACTTATCAAGCAGATCAAATCACAGAGTATTCGAAGATCGCTCAAGAACTTGACATTAGCGCC AGCCTGGGCATCTCGTATCTGGATAGCAGCGCCGAGGTCCAGTCTAAGTTTTTGAATAAGGCCACTTTCGAGGAA AGCCATTTAACGTACATCGTAAGAGCGGATGTGCTCCGCCAGCCAAACTCCCAGCACAAGTACGAGTTTGAATGG AACAAGGCTAAAGATCCAGGAACACGCTACTGTGATCGATTCATAAGCGTTAGTGGCTTAGACTTTATACAAGGC GGTGCCTTGTACGCCCGGGTATCGATCAAAACTAAGGACTCGTCAAAGAATCAAGATCTTGAGGTGAACGCTAAG ACGGCGTTCGGAATGTTCGGAGTCGATGTCACAGTTGATGCAGCTATGAAGAAGAGTTCCGATTTTCTCCATGAG AACTCAGAAATCATTGTCTCATGGTTTTGGGTGGGAGCGCCTCCTGATTATGGCGAACACCTGAAGGCCGTCAAG GAAGTCGACGGTAATCTATTGGAAATTAAGAATCTATCCGATAAGTTCATTAAAGAAGCCGGCAAGCACCAGTGG AAACGATACGCGATTCTTGAGCGGTACGATCAGATCTTTAACTGGAACAATGAGTTCCAACCTCTGGATTATACC GAAGCAAGTGAACGTACCTGGGGGGTTTTCAACGATTACGCAAGCTATGAAAGCATGCTCCAAATGGTACTAAAG CTTGAACTGCCCGAGGCTCTGGAGGAACAGAGAAAAAAGCTGCAGGAGAAGGTTATCCAAACTAAAGCCGCAATC AATGATGTTACTGCAAACCCGGACGCATCCAAACAGAACCCGGAGTATGAAGCTCCGGAGAACTTTTTTGGAACT ATCCTGGACACATTATCGACTCCGTTCATTGTCCAAAAAGTAGACTACCAATATGTCCAAAAATGGTCCAGTTCC CTTATCGATCAAGAGCTCCGTAAAGATCAAGCCAATGCAACTAGACTTTTCGAGATTGGAGCATTTACGTTCCCT GGCATTACCGGTACTGTAAAGCTTACATTTGGAAACAGGCCAAAATTGCCCTGGTGGGATAAGACCATTGACGCA CCATTGCCCCCTGAATATGTCGAGCAAAGTCATTTATGGGTCTTCAATCAGTCTCAAGCAGGAGATTTCAATCGG CCAGTGTATATCTTCGAAGTCATTGACTCGGAACACGATTGGTGGGATAGGCTCGAAATTTCCCTGAATTCATCG CCGCCGGACCAGCATGTGAGGGGCCCCGATATCTTCTACACGAAGCTAGTTCAGGGCCAAGAATTAGACGCTGGC TCGGAGCGAGATGAGGATAACGAAATCACCTAG |
Gene | >Hirsu2|8288 ATGCATTACGCCATCCTTTGGGTAGCAACATGGATTGGATATTCTCAGCTGGCAGTTGCAGCTAGTATACCTAAT TCTGTTGACGATAACGATGTAGACTCCAGCGTCCTCTCTAAGGTCCCGTATACCGAGGGGTTGACTTTAGGCCAA GGGTGAGGGGCCTATTACAGGGCAAAGACTGTTGAGATGTTCGGTGCGAGTGCTAACCATAGTGAAGATATAACA CCTACCTTCAACAGGGCTGTATGAACGGAGCCGTGGATGTCAAGGGCGATGCTAGTCCGTCGCCTCAGGTCCAGA TCACTTATCAAGCAGATCAAATCACAGAGTATTCGTTAGTGACCAGAGACTCGGATCTTCTAGGTCTAGGTACTG ATATCTGCATATAATCTACAGGAAGATCGCTCAAGAACTTGACATTAGCGCCAGCCTGGGCATCTCGTATCTGGA TAGCAGCGCCGAGGTCCAGTCTAAGTTTTTGAATAAGGCCACTGTAAGTAACCGTGTCAAACGGAGATGTGCTAT GGGTCTTACATTACATTAGTTCGAGGAAAGCCATTTAACGTACATCGTAAGAGCGGATGTGCTCCGCCAGCCAAA CTCCCAGCACAAGTACGAGTTTGAATGGAACAAGGCTAAAGATCCAGGAACACGCTACTGTGATCGATTCATAAG CGGTGTGTTCTCACGTCGTCAATCGAAGGAGTCAAATTTTGTCTAATAGTTAGTGGCTTAGACTTTATACAAGGC GGTGCCTTGTACGCCCGGGTATCGATCAAAACTAAGGACTCGTCAAAGAATCAAGATCTTGAGGTGAAGTTAGTA TATCTCTTATACTTCATACTTTCAGAATCTTTCTAACTCAAGAGATCAATCAGCGCTAAGACGGCGTTCGGAATG TTCGGAGTCGATGTCACAGTTGATGCAGCTATGAAGAAGAGTTCCGATTTTCTCCATGAGAACTCAGAAATCATT GTCTCATGGTTTTGGGTGGGAGCGCCTCCTGATTATGGCGAACACCTGAAGGCCGTCAAGGAAGTCGACGGTAAT CTATTGGAAATTAAGAATCTATCCGATAAGTTCATTAAAGAAGCCGGCAAGCACCAGTGGAAACGATAGTAAGTC CAAATAATTAAGGTAATGTGGAGATGCTAATCTACAATGAAGCGCGATTCTTGAGCGGTACGATCAGATCTTTAA CTGGAACAATGAGTTCCAACCTCTGGATTATACCGAAGCAAGTGAACGTGTAAGCCTGTCAAGTCTGCTAAATTC CAGGAGAGATCCACCAAAAACTAAGATATTTACAGACCTGGGGGGTTTTCAACGATTACGCAAGCTATGAAAGCA TGCTCCAAATGGTACTAAAGCGTAAGTCTAAGCGAGGTCTCAACCTGCACTCCTAGGGAATCTAAAATAATTATA GTTGAACTGCCCGAGGCTCTGGAGGAACAGAGAAAAAAGCTGCAGGAGAAGGTTATCCAAACTAAAGCCGCAGTA CAGAAATGGGCATGTCAGCCATAAGCGTCGGTACCTTGATCCTAGCTAATATATGACAGATCAATGATGTTACTG CAAACCCGGACGCATCCAAACAGAACCCGGAGTATGAAGCTCCGGAGAACTTTTTTGGAACTATCCTGGTATGTA ACTCTTTCATCCTTAGCTAAAGCTGCACTAGTCTGAACTGACCATTTACCAGGACACATTATCGACTCCGTTCAT TGTCCAAAAAGTAGACTACCAATATGTCCAAAAATGGTCCAGTTCCCGTACGAAAAATATCCTTTACTTTTGCTA GAGATTAAACAGCTGCTGACGGGCGTTTCTGAGCAGTTATCGATCAAGAGCTCCGTAAAGATCAAGCCAATGCAA CTAGACTTTTCGAGATTGGAGCATTTACGTTCCCTGGCATTACCGGTACTGTAAAGCTTACATTTGGAAACAGGC CAAAATTGCCCTGGTGGGATAAGACCATTGACGCACCATTGCCCCCTGAATATGTCGAGCAAAGTCATTTATGGG TCTTCAATCAGTCTCAAGCAGGAGATTTCAATCGGCCAGTGTATATCTTCGAAGTCATTGACTCGGAACACGATT GGTGGGATAGGCTCGAAATTTCCCTGAATTCATCGCCGCCGGACCAGCATGTGAGGGGCCCCGATATCTTCTACA CGAAGCTAGTTCAGGGCCAAGAATTAGACGCTGGCTCGGAGCGAGATGAGGATAACGAAATCACCTAG |