Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8281
Gene name
LocationContig_53:12037..13867
Strand-
Gene length (bp)1830
Transcript length (bp)1656
Coding sequence length (bp)1656
Protein length (aa) 552

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00144 Beta-lactamase Beta-lactamase 2.8E-46 47 378

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q6GDZ1|FLP_STAAR Protein flp OS=Staphylococcus aureus (strain MRSA252) GN=flp PE=3 SV=1 13 373 5.0E-08
sp|Q5HDB2|FLP_STAAC Protein flp OS=Staphylococcus aureus (strain COL) GN=flp PE=4 SV=1 57 373 6.0E-08
sp|Q7A3Q5|FLP_STAAN Protein flp OS=Staphylococcus aureus (strain N315) GN=flp PE=1 SV=1 13 373 6.0E-08
sp|Q99RJ0|FLP_STAAM Protein flp OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=flp PE=3 SV=1 13 373 6.0E-08
sp|Q9KJ74|FLP_STAAU Protein flp OS=Staphylococcus aureus GN=flp PE=4 SV=1 13 373 7.0E-08
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q6GDZ1|FLP_STAAR Protein flp OS=Staphylococcus aureus (strain MRSA252) GN=flp PE=3 SV=1 13 373 5.0E-08
sp|Q5HDB2|FLP_STAAC Protein flp OS=Staphylococcus aureus (strain COL) GN=flp PE=4 SV=1 57 373 6.0E-08
sp|Q7A3Q5|FLP_STAAN Protein flp OS=Staphylococcus aureus (strain N315) GN=flp PE=1 SV=1 13 373 6.0E-08
sp|Q99RJ0|FLP_STAAM Protein flp OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=flp PE=3 SV=1 13 373 6.0E-08
sp|Q9KJ74|FLP_STAAU Protein flp OS=Staphylococcus aureus GN=flp PE=4 SV=1 13 373 7.0E-08
sp|Q2FVH6|FLP_STAA8 Protein flp OS=Staphylococcus aureus (strain NCTC 8325) GN=flp PE=4 SV=1 13 373 7.0E-08
sp|Q6G6M9|FLP_STAAS Protein flp OS=Staphylococcus aureus (strain MSSA476) GN=flp PE=3 SV=1 13 373 1.0E-07
sp|P15555|DAC_STRSR D-alanyl-D-alanine carboxypeptidase OS=Streptomyces sp. (strain R61) PE=1 SV=2 86 385 7.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 26 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8281
MGSFGRLVLAACFASNALLTQHAGAAAVTNDSPSAGKNPLADDGFVEVVRKTMDLFHAPGLAIAVVDGSEEFSKG
YGLEHFDDPDRKCTDETLFYAGSTTKAQTAACLSMLINDKTYPELSDGWSTSLASILDGDFQYQDEWATAHLTLN
DLVSHRHGLPRHDRALMQEKDGQALSLQELVRNTRNLADPNEARVQAIYGNHAYMTLSLVIERLTKKPLKEVMRE
LLWDPLGMTSTYFGLQDARDGAGDRLAAGHVWLPESEKLRNVTYMPLTDVSGAAAVVSNVKDYARWIKALLNQTE
LFSPEVYADIKQPRMVYEPYSNKITDVSLYGLGWFRTTYKGHVVYMHDGSMIGFKSWVWWFPDDEYGLVMFTNSD
ESGTLLKILAWQHLIADRFAVPEQDRFNLTQEYLDDVQTTPAQRYDNAVKQLYPEHAKPAGNEAQTSSSFSPEDL
AGTYADEGYGRMALRVADNGTLTVERPEMTWRYGLTFRHVYADHWIASEAWLEDMANPGLHHPVEFLKEGGKDGR
PGAMRIAWQAGGKTEANVTFSREASL*
Coding >Hirsu2|8281
ATGGGGAGCTTCGGACGTCTTGTGCTGGCCGCGTGCTTCGCTTCCAATGCTCTGCTGACGCAACATGCCGGCGCC
GCTGCCGTGACGAACGATAGCCCATCTGCCGGCAAGAATCCCCTCGCCGACGACGGATTCGTCGAAGTCGTCCGC
AAAACAATGGACCTTTTCCATGCTCCTGGGCTGGCCATCGCCGTTGTCGACGGTAGCGAGGAGTTTTCCAAGGGC
TACGGCCTCGAGCACTTCGACGACCCGGACAGGAAATGCACAGACGAAACCCTGTTTTACGCTGGCTCAACTACC
AAGGCCCAGACTGCGGCCTGCTTGTCCATGCTGATCAATGACAAGACGTACCCAGAGCTGTCCGACGGCTGGTCA
ACGAGCCTCGCCTCGATCCTGGACGGTGACTTCCAGTACCAGGACGAGTGGGCGACGGCGCACCTCACGCTCAAC
GATCTCGTCAGCCACCGGCACGGACTCCCTCGCCACGACCGGGCCTTGATGCAGGAGAAGGACGGGCAGGCGCTG
TCGCTGCAGGAGTTGGTCCGCAACACGCGCAACCTGGCGGACCCGAACGAGGCGCGCGTGCAGGCCATCTACGGC
AACCACGCGTACATGACGCTCTCCCTCGTCATCGAGAGGCTGACGAAGAAGCCGCTCAAGGAGGTGATGCGGGAG
CTGCTCTGGGACCCCCTGGGCATGACGTCGACCTACTTTGGCCTGCAGGACGCCCGCGACGGGGCCGGAGACCGG
CTGGCGGCCGGGCACGTCTGGCTGCCGGAGAGCGAGAAGCTCCGGAACGTGACGTACATGCCGCTGACGGACGTG
AGCGGCGCGGCGGCCGTGGTTTCCAACGTCAAGGACTACGCCCGCTGGATCAAGGCCCTGCTCAACCAGACGGAG
CTCTTCTCCCCCGAAGTGTACGCGGACATCAAGCAGCCGAGGATGGTCTACGAACCGTACTCGAACAAGATCACG
GATGTGAGCCTGTACGGGCTCGGCTGGTTCCGGACCACGTACAAGGGGCACGTCGTCTACATGCACGACGGGAGC
ATGATCGGCTTCAAGTCCTGGGTCTGGTGGTTTCCGGACGACGAGTACGGCCTCGTCATGTTCACCAACTCGGAC
GAGAGCGGAACTCTTCTCAAGATCCTCGCCTGGCAGCACCTCATCGCCGATAGGTTTGCCGTCCCGGAGCAGGAC
CGCTTCAACCTGACCCAAGAGTATCTGGATGACGTGCAGACGACCCCGGCCCAGCGCTACGACAACGCCGTCAAG
CAGCTGTACCCCGAGCACGCGAAGCCGGCCGGCAACGAAGCGCAGACGTCGTCGTCGTTCAGCCCGGAGGATCTG
GCCGGCACGTACGCGGACGAGGGATACGGGCGCATGGCGCTCCGCGTGGCCGACAACGGCACGCTGACGGTGGAG
CGCCCGGAGATGACGTGGAGGTACGGCCTCACCTTCCGCCACGTCTACGCCGACCACTGGATCGCGAGCGAGGCG
TGGCTCGAGGACATGGCCAACCCTGGCCTCCACCACCCGGTCGAGTTCCTCAAGGAGGGCGGCAAGGACGGGAGG
CCGGGGGCGATGAGGATCGCGTGGCAGGCGGGCGGCAAGACGGAGGCGAACGTCACGTTCTCCAGGGAGGCCTCG
CTCTAG
Transcript >Hirsu2|8281
ATGGGGAGCTTCGGACGTCTTGTGCTGGCCGCGTGCTTCGCTTCCAATGCTCTGCTGACGCAACATGCCGGCGCC
GCTGCCGTGACGAACGATAGCCCATCTGCCGGCAAGAATCCCCTCGCCGACGACGGATTCGTCGAAGTCGTCCGC
AAAACAATGGACCTTTTCCATGCTCCTGGGCTGGCCATCGCCGTTGTCGACGGTAGCGAGGAGTTTTCCAAGGGC
TACGGCCTCGAGCACTTCGACGACCCGGACAGGAAATGCACAGACGAAACCCTGTTTTACGCTGGCTCAACTACC
AAGGCCCAGACTGCGGCCTGCTTGTCCATGCTGATCAATGACAAGACGTACCCAGAGCTGTCCGACGGCTGGTCA
ACGAGCCTCGCCTCGATCCTGGACGGTGACTTCCAGTACCAGGACGAGTGGGCGACGGCGCACCTCACGCTCAAC
GATCTCGTCAGCCACCGGCACGGACTCCCTCGCCACGACCGGGCCTTGATGCAGGAGAAGGACGGGCAGGCGCTG
TCGCTGCAGGAGTTGGTCCGCAACACGCGCAACCTGGCGGACCCGAACGAGGCGCGCGTGCAGGCCATCTACGGC
AACCACGCGTACATGACGCTCTCCCTCGTCATCGAGAGGCTGACGAAGAAGCCGCTCAAGGAGGTGATGCGGGAG
CTGCTCTGGGACCCCCTGGGCATGACGTCGACCTACTTTGGCCTGCAGGACGCCCGCGACGGGGCCGGAGACCGG
CTGGCGGCCGGGCACGTCTGGCTGCCGGAGAGCGAGAAGCTCCGGAACGTGACGTACATGCCGCTGACGGACGTG
AGCGGCGCGGCGGCCGTGGTTTCCAACGTCAAGGACTACGCCCGCTGGATCAAGGCCCTGCTCAACCAGACGGAG
CTCTTCTCCCCCGAAGTGTACGCGGACATCAAGCAGCCGAGGATGGTCTACGAACCGTACTCGAACAAGATCACG
GATGTGAGCCTGTACGGGCTCGGCTGGTTCCGGACCACGTACAAGGGGCACGTCGTCTACATGCACGACGGGAGC
ATGATCGGCTTCAAGTCCTGGGTCTGGTGGTTTCCGGACGACGAGTACGGCCTCGTCATGTTCACCAACTCGGAC
GAGAGCGGAACTCTTCTCAAGATCCTCGCCTGGCAGCACCTCATCGCCGATAGGTTTGCCGTCCCGGAGCAGGAC
CGCTTCAACCTGACCCAAGAGTATCTGGATGACGTGCAGACGACCCCGGCCCAGCGCTACGACAACGCCGTCAAG
CAGCTGTACCCCGAGCACGCGAAGCCGGCCGGCAACGAAGCGCAGACGTCGTCGTCGTTCAGCCCGGAGGATCTG
GCCGGCACGTACGCGGACGAGGGATACGGGCGCATGGCGCTCCGCGTGGCCGACAACGGCACGCTGACGGTGGAG
CGCCCGGAGATGACGTGGAGGTACGGCCTCACCTTCCGCCACGTCTACGCCGACCACTGGATCGCGAGCGAGGCG
TGGCTCGAGGACATGGCCAACCCTGGCCTCCACCACCCGGTCGAGTTCCTCAAGGAGGGCGGCAAGGACGGGAGG
CCGGGGGCGATGAGGATCGCGTGGCAGGCGGGCGGCAAGACGGAGGCGAACGTCACGTTCTCCAGGGAGGCCTCG
CTCTAG
Gene >Hirsu2|8281
ATGGGGAGCTTCGGACGTCTTGTGCTGGCCGCGTGCTTCGCTTCCAATGCTCTGCTGACGCAACATGCCGGCGCC
GCTGCCGTGACGAACGATAGCCCATCTGCCGGCAAGAATCCCCTCGCCGACGACGGATTCGTCGAAGTCGTCCGC
AAAACAATGGACCTTTTCCATGCTCCTGGGCTGGCCATCGCCGTTGTCGACGGTAGCGAGGAGTTTTCCAAGGTT
CGTGCGGACTGTTCTACGCGCGCAGATGCGGGCGGTGGTCTCCAGACGGCATCAATGGAGAAGGCGTACGAAGAT
TTCGGCCTGTCGCTGACAGTTCTTCTACCGAATAGGGCTACGGCCTCGAGCACTTCGACGACCCGGACAGGAAAT
GCACAGACGAAACCCTGTTTTACGCTGGCTCAACTACCAAGGCCCAGACTGCGGCCTGCTTGTCCATGCTGATCA
ATGACAAGACGTACCCAGAGCTGTCCGACGGCTGGTCAACGAGCCTCGCCTCGATCCTGGACGGTGACTTCCAGT
ACCAGGACGAGTGGGCGACGGCGCACCTCACGCTCAACGATCTCGTCAGCCACCGGCACGGACTCCCTCGCCACG
ACCGGGCCTTGATGCAGGAGAAGGACGGGCAGGCGCTGTCGCTGCAGGAGTTGGTCCGCAACACGCGCAACCTGG
CGGACCCGAACGAGGCGCGCGTGCAGGCCATCTACGGCAACCACGCGTACATGACGCTCTCCCTCGTCATCGAGA
GGCTGACGAAGAAGCCGCTCAAGGAGGTGATGCGGGAGCTGCTCTGGGACCCCCTGGGCATGACGTCGACCTACT
TTGGCCTGCAGGACGCCCGCGACGGGGCCGGAGACCGGCTGGCGGCCGGGCACGTCTGGCTGCCGGAGAGCGAGA
AGCTCCGGAACGTGACGTACATGCCGCTGACGGACGTGAGCGGCGCGGCGGCCGTGGTTTCCAACGTCAAGGACT
ACGCCCGCTGGATCAAGGCCCTGCTCAACCAGACGGAGCTCTTCTCCCCCGAAGTGTACGCGGACATCAAGCAGC
CGAGGATGGTCTACGAACCGTACTCGAACAAGATCACGGATGTGAGCCTGTACGGGCTCGGCTGGTTCCGGACCA
CGTACAAGGGGCACGTCGTCTACATGCACGACGGGAGCATGATCGGCTTCAAGTCCTGGGTCTGGTGGTTTCCGG
ACGACGAGTACGGCCTCGTCATGTTCACCAACTCGGACGAGAGCGGAACTCTTCTCAAGATCCTCGCCTGGCAGC
ACCTCATCGCCGATAGGTTTGCCGTCCCGGAGCAGGACCGCTTCAACCTGACCCAAGAGTCCGTCCGCCCCGCCG
AGACGCGCCGAATCCAGATGACAGGCTGACGGCGAGCGACTTAGGTATCTGGATGACGTGCAGACGACCCCGGCC
CAGCGCTACGACAACGCCGTCAAGCAGCTGTACCCCGAGCACGCGAAGCCGGCCGGCAACGAAGCGCAGACGTCG
TCGTCGTTCAGCCCGGAGGATCTGGCCGGCACGTACGCGGACGAGGGATACGGGCGCATGGCGCTCCGCGTGGCC
GACAACGGCACGCTGACGGTGGAGCGCCCGGAGATGACGTGGAGGTACGGCCTCACCTTCCGCCACGTCTACGCC
GACCACTGGATCGCGAGCGAGGCGTGGCTCGAGGACATGGCCAACCCTGGCCTCCACCACCCGGTCGAGTTCCTC
AAGGAGGGCGGCAAGGACGGGAGGCCGGGGGCGATGAGGATCGCGTGGCAGGCGGGCGGCAAGACGGAGGCGAAC
GTCACGTTCTCCAGGGAGGCCTCGCTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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