Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|8281
Gene name
Location	Contig_53:12037..13867
Strand	-
Gene length (bp)	1830
Transcript length (bp)	1656
Coding sequence length (bp)	1656
Protein length (aa)	552

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00144	Beta-lactamase	Beta-lactamase	2.8E-46	47	378

Swissprot hits

[Show all]

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q6GDZ1\|FLP_STAAR	Protein flp OS=Staphylococcus aureus (strain MRSA252) GN=flp PE=3 SV=1	13	373	5.0E-08
sp\|Q5HDB2\|FLP_STAAC	Protein flp OS=Staphylococcus aureus (strain COL) GN=flp PE=4 SV=1	57	373	6.0E-08
sp\|Q7A3Q5\|FLP_STAAN	Protein flp OS=Staphylococcus aureus (strain N315) GN=flp PE=1 SV=1	13	373	6.0E-08
sp\|Q99RJ0\|FLP_STAAM	Protein flp OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=flp PE=3 SV=1	13	373	6.0E-08
sp\|Q9KJ74\|FLP_STAAU	Protein flp OS=Staphylococcus aureus GN=flp PE=4 SV=1	13	373	7.0E-08

[Show all]

[Show less]

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q6GDZ1\|FLP_STAAR	Protein flp OS=Staphylococcus aureus (strain MRSA252) GN=flp PE=3 SV=1	13	373	5.0E-08
sp\|Q5HDB2\|FLP_STAAC	Protein flp OS=Staphylococcus aureus (strain COL) GN=flp PE=4 SV=1	57	373	6.0E-08
sp\|Q7A3Q5\|FLP_STAAN	Protein flp OS=Staphylococcus aureus (strain N315) GN=flp PE=1 SV=1	13	373	6.0E-08
sp\|Q99RJ0\|FLP_STAAM	Protein flp OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=flp PE=3 SV=1	13	373	6.0E-08
sp\|Q9KJ74\|FLP_STAAU	Protein flp OS=Staphylococcus aureus GN=flp PE=4 SV=1	13	373	7.0E-08
sp\|Q2FVH6\|FLP_STAA8	Protein flp OS=Staphylococcus aureus (strain NCTC 8325) GN=flp PE=4 SV=1	13	373	7.0E-08
sp\|Q6G6M9\|FLP_STAAS	Protein flp OS=Staphylococcus aureus (strain MSSA476) GN=flp PE=3 SV=1	13	373	1.0E-07
sp\|P15555\|DAC_STRSR	D-alanyl-D-alanine carboxypeptidase OS=Streptomyces sp. (strain R61) PE=1 SV=2	86	385	7.0E-06

[Show less]

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 26	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|8281 MGSFGRLVLAACFASNALLTQHAGAAAVTNDSPSAGKNPLADDGFVEVVRKTMDLFHAPGLAIAVVDGSEEFSKG YGLEHFDDPDRKCTDETLFYAGSTTKAQTAACLSMLINDKTYPELSDGWSTSLASILDGDFQYQDEWATAHLTLN DLVSHRHGLPRHDRALMQEKDGQALSLQELVRNTRNLADPNEARVQAIYGNHAYMTLSLVIERLTKKPLKEVMRE LLWDPLGMTSTYFGLQDARDGAGDRLAAGHVWLPESEKLRNVTYMPLTDVSGAAAVVSNVKDYARWIKALLNQTE LFSPEVYADIKQPRMVYEPYSNKITDVSLYGLGWFRTTYKGHVVYMHDGSMIGFKSWVWWFPDDEYGLVMFTNSD ESGTLLKILAWQHLIADRFAVPEQDRFNLTQEYLDDVQTTPAQRYDNAVKQLYPEHAKPAGNEAQTSSSFSPEDL AGTYADEGYGRMALRVADNGTLTVERPEMTWRYGLTFRHVYADHWIASEAWLEDMANPGLHHPVEFLKEGGKDGR PGAMRIAWQAGGKTEANVTFSREASL*
Coding	>Hirsu2\|8281 ATGGGGAGCTTCGGACGTCTTGTGCTGGCCGCGTGCTTCGCTTCCAATGCTCTGCTGACGCAACATGCCGGCGCC GCTGCCGTGACGAACGATAGCCCATCTGCCGGCAAGAATCCCCTCGCCGACGACGGATTCGTCGAAGTCGTCCGC AAAACAATGGACCTTTTCCATGCTCCTGGGCTGGCCATCGCCGTTGTCGACGGTAGCGAGGAGTTTTCCAAGGGC TACGGCCTCGAGCACTTCGACGACCCGGACAGGAAATGCACAGACGAAACCCTGTTTTACGCTGGCTCAACTACC AAGGCCCAGACTGCGGCCTGCTTGTCCATGCTGATCAATGACAAGACGTACCCAGAGCTGTCCGACGGCTGGTCA ACGAGCCTCGCCTCGATCCTGGACGGTGACTTCCAGTACCAGGACGAGTGGGCGACGGCGCACCTCACGCTCAAC GATCTCGTCAGCCACCGGCACGGACTCCCTCGCCACGACCGGGCCTTGATGCAGGAGAAGGACGGGCAGGCGCTG TCGCTGCAGGAGTTGGTCCGCAACACGCGCAACCTGGCGGACCCGAACGAGGCGCGCGTGCAGGCCATCTACGGC AACCACGCGTACATGACGCTCTCCCTCGTCATCGAGAGGCTGACGAAGAAGCCGCTCAAGGAGGTGATGCGGGAG CTGCTCTGGGACCCCCTGGGCATGACGTCGACCTACTTTGGCCTGCAGGACGCCCGCGACGGGGCCGGAGACCGG CTGGCGGCCGGGCACGTCTGGCTGCCGGAGAGCGAGAAGCTCCGGAACGTGACGTACATGCCGCTGACGGACGTG AGCGGCGCGGCGGCCGTGGTTTCCAACGTCAAGGACTACGCCCGCTGGATCAAGGCCCTGCTCAACCAGACGGAG CTCTTCTCCCCCGAAGTGTACGCGGACATCAAGCAGCCGAGGATGGTCTACGAACCGTACTCGAACAAGATCACG GATGTGAGCCTGTACGGGCTCGGCTGGTTCCGGACCACGTACAAGGGGCACGTCGTCTACATGCACGACGGGAGC ATGATCGGCTTCAAGTCCTGGGTCTGGTGGTTTCCGGACGACGAGTACGGCCTCGTCATGTTCACCAACTCGGAC GAGAGCGGAACTCTTCTCAAGATCCTCGCCTGGCAGCACCTCATCGCCGATAGGTTTGCCGTCCCGGAGCAGGAC CGCTTCAACCTGACCCAAGAGTATCTGGATGACGTGCAGACGACCCCGGCCCAGCGCTACGACAACGCCGTCAAG CAGCTGTACCCCGAGCACGCGAAGCCGGCCGGCAACGAAGCGCAGACGTCGTCGTCGTTCAGCCCGGAGGATCTG GCCGGCACGTACGCGGACGAGGGATACGGGCGCATGGCGCTCCGCGTGGCCGACAACGGCACGCTGACGGTGGAG CGCCCGGAGATGACGTGGAGGTACGGCCTCACCTTCCGCCACGTCTACGCCGACCACTGGATCGCGAGCGAGGCG TGGCTCGAGGACATGGCCAACCCTGGCCTCCACCACCCGGTCGAGTTCCTCAAGGAGGGCGGCAAGGACGGGAGG CCGGGGGCGATGAGGATCGCGTGGCAGGCGGGCGGCAAGACGGAGGCGAACGTCACGTTCTCCAGGGAGGCCTCG CTCTAG
Transcript	>Hirsu2\|8281 ATGGGGAGCTTCGGACGTCTTGTGCTGGCCGCGTGCTTCGCTTCCAATGCTCTGCTGACGCAACATGCCGGCGCC GCTGCCGTGACGAACGATAGCCCATCTGCCGGCAAGAATCCCCTCGCCGACGACGGATTCGTCGAAGTCGTCCGC AAAACAATGGACCTTTTCCATGCTCCTGGGCTGGCCATCGCCGTTGTCGACGGTAGCGAGGAGTTTTCCAAGGGC TACGGCCTCGAGCACTTCGACGACCCGGACAGGAAATGCACAGACGAAACCCTGTTTTACGCTGGCTCAACTACC AAGGCCCAGACTGCGGCCTGCTTGTCCATGCTGATCAATGACAAGACGTACCCAGAGCTGTCCGACGGCTGGTCA ACGAGCCTCGCCTCGATCCTGGACGGTGACTTCCAGTACCAGGACGAGTGGGCGACGGCGCACCTCACGCTCAAC GATCTCGTCAGCCACCGGCACGGACTCCCTCGCCACGACCGGGCCTTGATGCAGGAGAAGGACGGGCAGGCGCTG TCGCTGCAGGAGTTGGTCCGCAACACGCGCAACCTGGCGGACCCGAACGAGGCGCGCGTGCAGGCCATCTACGGC AACCACGCGTACATGACGCTCTCCCTCGTCATCGAGAGGCTGACGAAGAAGCCGCTCAAGGAGGTGATGCGGGAG CTGCTCTGGGACCCCCTGGGCATGACGTCGACCTACTTTGGCCTGCAGGACGCCCGCGACGGGGCCGGAGACCGG CTGGCGGCCGGGCACGTCTGGCTGCCGGAGAGCGAGAAGCTCCGGAACGTGACGTACATGCCGCTGACGGACGTG AGCGGCGCGGCGGCCGTGGTTTCCAACGTCAAGGACTACGCCCGCTGGATCAAGGCCCTGCTCAACCAGACGGAG CTCTTCTCCCCCGAAGTGTACGCGGACATCAAGCAGCCGAGGATGGTCTACGAACCGTACTCGAACAAGATCACG GATGTGAGCCTGTACGGGCTCGGCTGGTTCCGGACCACGTACAAGGGGCACGTCGTCTACATGCACGACGGGAGC ATGATCGGCTTCAAGTCCTGGGTCTGGTGGTTTCCGGACGACGAGTACGGCCTCGTCATGTTCACCAACTCGGAC GAGAGCGGAACTCTTCTCAAGATCCTCGCCTGGCAGCACCTCATCGCCGATAGGTTTGCCGTCCCGGAGCAGGAC CGCTTCAACCTGACCCAAGAGTATCTGGATGACGTGCAGACGACCCCGGCCCAGCGCTACGACAACGCCGTCAAG CAGCTGTACCCCGAGCACGCGAAGCCGGCCGGCAACGAAGCGCAGACGTCGTCGTCGTTCAGCCCGGAGGATCTG GCCGGCACGTACGCGGACGAGGGATACGGGCGCATGGCGCTCCGCGTGGCCGACAACGGCACGCTGACGGTGGAG CGCCCGGAGATGACGTGGAGGTACGGCCTCACCTTCCGCCACGTCTACGCCGACCACTGGATCGCGAGCGAGGCG TGGCTCGAGGACATGGCCAACCCTGGCCTCCACCACCCGGTCGAGTTCCTCAAGGAGGGCGGCAAGGACGGGAGG CCGGGGGCGATGAGGATCGCGTGGCAGGCGGGCGGCAAGACGGAGGCGAACGTCACGTTCTCCAGGGAGGCCTCG CTCTAG
Gene	>Hirsu2\|8281 ATGGGGAGCTTCGGACGTCTTGTGCTGGCCGCGTGCTTCGCTTCCAATGCTCTGCTGACGCAACATGCCGGCGCC GCTGCCGTGACGAACGATAGCCCATCTGCCGGCAAGAATCCCCTCGCCGACGACGGATTCGTCGAAGTCGTCCGC AAAACAATGGACCTTTTCCATGCTCCTGGGCTGGCCATCGCCGTTGTCGACGGTAGCGAGGAGTTTTCCAAGGTT CGTGCGGACTGTTCTACGCGCGCAGATGCGGGCGGTGGTCTCCAGACGGCATCAATGGAGAAGGCGTACGAAGAT TTCGGCCTGTCGCTGACAGTTCTTCTACCGAATAGGGCTACGGCCTCGAGCACTTCGACGACCCGGACAGGAAAT GCACAGACGAAACCCTGTTTTACGCTGGCTCAACTACCAAGGCCCAGACTGCGGCCTGCTTGTCCATGCTGATCA ATGACAAGACGTACCCAGAGCTGTCCGACGGCTGGTCAACGAGCCTCGCCTCGATCCTGGACGGTGACTTCCAGT ACCAGGACGAGTGGGCGACGGCGCACCTCACGCTCAACGATCTCGTCAGCCACCGGCACGGACTCCCTCGCCACG ACCGGGCCTTGATGCAGGAGAAGGACGGGCAGGCGCTGTCGCTGCAGGAGTTGGTCCGCAACACGCGCAACCTGG CGGACCCGAACGAGGCGCGCGTGCAGGCCATCTACGGCAACCACGCGTACATGACGCTCTCCCTCGTCATCGAGA GGCTGACGAAGAAGCCGCTCAAGGAGGTGATGCGGGAGCTGCTCTGGGACCCCCTGGGCATGACGTCGACCTACT TTGGCCTGCAGGACGCCCGCGACGGGGCCGGAGACCGGCTGGCGGCCGGGCACGTCTGGCTGCCGGAGAGCGAGA AGCTCCGGAACGTGACGTACATGCCGCTGACGGACGTGAGCGGCGCGGCGGCCGTGGTTTCCAACGTCAAGGACT ACGCCCGCTGGATCAAGGCCCTGCTCAACCAGACGGAGCTCTTCTCCCCCGAAGTGTACGCGGACATCAAGCAGC CGAGGATGGTCTACGAACCGTACTCGAACAAGATCACGGATGTGAGCCTGTACGGGCTCGGCTGGTTCCGGACCA CGTACAAGGGGCACGTCGTCTACATGCACGACGGGAGCATGATCGGCTTCAAGTCCTGGGTCTGGTGGTTTCCGG ACGACGAGTACGGCCTCGTCATGTTCACCAACTCGGACGAGAGCGGAACTCTTCTCAAGATCCTCGCCTGGCAGC ACCTCATCGCCGATAGGTTTGCCGTCCCGGAGCAGGACCGCTTCAACCTGACCCAAGAGTCCGTCCGCCCCGCCG AGACGCGCCGAATCCAGATGACAGGCTGACGGCGAGCGACTTAGGTATCTGGATGACGTGCAGACGACCCCGGCC CAGCGCTACGACAACGCCGTCAAGCAGCTGTACCCCGAGCACGCGAAGCCGGCCGGCAACGAAGCGCAGACGTCG TCGTCGTTCAGCCCGGAGGATCTGGCCGGCACGTACGCGGACGAGGGATACGGGCGCATGGCGCTCCGCGTGGCC GACAACGGCACGCTGACGGTGGAGCGCCCGGAGATGACGTGGAGGTACGGCCTCACCTTCCGCCACGTCTACGCC GACCACTGGATCGCGAGCGAGGCGTGGCTCGAGGACATGGCCAACCCTGGCCTCCACCACCCGGTCGAGTTCCTC AAGGAGGGCGGCAAGGACGGGAGGCCGGGGGCGATGAGGATCGCGTGGCAGGCGGGCGGCAAGACGGAGGCGAAC GTCACGTTCTCCAGGGAGGCCTCGCTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail