© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|8267 |
| Gene name | |
| Location | Contig_528:14576..15866 |
| Strand | + |
| Gene length (bp) | 1290 |
| Transcript length (bp) | 1080 |
| Coding sequence length (bp) | 1080 |
| Protein length (aa) | 360 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03239 | FTR1 | Iron permease FTR1 family | 7.2E-78 | 8 | 310 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P40088|FTR1_YEAST | Plasma membrane iron permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FTR1 PE=1 SV=1 | 16 | 333 | 3.0E-110 |
| sp|Q09919|FIP1_SCHPO | Plasma membrane iron permease OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fip1 PE=1 SV=1 | 1 | 316 | 9.0E-94 |
| sp|P38310|FTH1_YEAST | Iron transporter FTH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FTH1 PE=1 SV=2 | 42 | 324 | 4.0E-87 |
| sp|Q3Z398|EFEU_SHISS | Ferrous iron permease EfeU OS=Shigella sonnei (strain Ss046) GN=efeU PE=3 SV=2 | 8 | 224 | 7.0E-10 |
| sp|Q8XAS8|EFEU_ECO57 | Ferrous iron permease EfeU OS=Escherichia coli O157:H7 GN=efeU PE=1 SV=3 | 8 | 224 | 7.0E-10 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P40088|FTR1_YEAST | Plasma membrane iron permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FTR1 PE=1 SV=1 | 16 | 333 | 3.0E-110 |
| sp|Q09919|FIP1_SCHPO | Plasma membrane iron permease OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fip1 PE=1 SV=1 | 1 | 316 | 9.0E-94 |
| sp|P38310|FTH1_YEAST | Iron transporter FTH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FTH1 PE=1 SV=2 | 42 | 324 | 4.0E-87 |
| sp|Q3Z398|EFEU_SHISS | Ferrous iron permease EfeU OS=Shigella sonnei (strain Ss046) GN=efeU PE=3 SV=2 | 8 | 224 | 7.0E-10 |
| sp|Q8XAS8|EFEU_ECO57 | Ferrous iron permease EfeU OS=Escherichia coli O157:H7 GN=efeU PE=1 SV=3 | 8 | 224 | 7.0E-10 |
| sp|Q1RDK0|EFEU_ECOUT | Ferrous iron permease EfeU OS=Escherichia coli (strain UTI89 / UPEC) GN=efeU PE=3 SV=2 | 8 | 224 | 9.0E-10 |
| sp|Q0TJ50|EFEU_ECOL5 | Ferrous iron permease EfeU OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=efeU PE=3 SV=1 | 8 | 224 | 9.0E-10 |
| sp|Q1CHD3|EFEU_YERPN | Ferrous iron permease EfeU OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=efeU PE=3 SV=1 | 8 | 238 | 2.0E-09 |
| sp|Q0WFU0|EFEU_YERPE | Ferrous iron permease EfeU OS=Yersinia pestis GN=efeU PE=3 SV=1 | 8 | 238 | 2.0E-09 |
| sp|Q1C8M3|EFEU_YERPA | Ferrous iron permease EfeU OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=efeU PE=3 SV=1 | 8 | 238 | 2.0E-09 |
| sp|Q66BP6|EFEU_YERPS | Ferrous iron permease EfeU OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=efeU PE=3 SV=1 | 8 | 238 | 3.0E-09 |
| sp|Q8FJ36|EFEU_ECOL6 | Ferrous iron permease EfeU OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=efeU PE=1 SV=2 | 8 | 224 | 3.0E-09 |
| sp|P75901|EFEU_ECOLI | Putative inactive ferrous iron permease EfeU OS=Escherichia coli (strain K12) GN=efeU PE=5 SV=2 | 8 | 224 | 2.0E-08 |
| sp|P39595|EFEU_BACSU | Ferrous iron permease EfeU OS=Bacillus subtilis (strain 168) GN=efeU PE=1 SV=2 | 12 | 233 | 7.0E-07 |
| sp|Q83LK5|EFEU_SHIFL | Ferrous iron permease EfeU OS=Shigella flexneri GN=efeU PE=3 SV=2 | 84 | 224 | 7.0E-07 |
| sp|Q0T618|EFEU_SHIF8 | Ferrous iron permease EfeU OS=Shigella flexneri serotype 5b (strain 8401) GN=efeU PE=3 SV=2 | 84 | 224 | 1.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005381 | iron ion transmembrane transporter activity | Yes |
| GO:0016020 | membrane | Yes |
| GO:0034755 | iron ion transmembrane transport | Yes |
| GO:0033573 | high-affinity iron permease complex | Yes |
| GO:1902495 | transmembrane transporter complex | No |
| GO:0098796 | membrane protein complex | No |
| GO:0032991 | protein-containing complex | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0098797 | plasma membrane protein complex | No |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
| GO:0009987 | cellular process | No |
| GO:0006826 | iron ion transport | No |
| GO:0030001 | metal ion transport | No |
| GO:1990351 | transporter complex | No |
| GO:0000041 | transition metal ion transport | No |
| GO:0098662 | inorganic cation transmembrane transport | No |
| GO:1905862 | ferroxidase complex | No |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0098660 | inorganic ion transmembrane transport | No |
| GO:0022890 | inorganic cation transmembrane transporter activity | No |
| GO:0055085 | transmembrane transport | No |
| GO:0005575 | cellular_component | No |
| GO:0034220 | ion transmembrane transport | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0098655 | cation transmembrane transport | No |
| GO:0006812 | cation transport | No |
| GO:0046873 | metal ion transmembrane transporter activity | No |
| GO:0046915 | transition metal ion transmembrane transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:1902494 | catalytic complex | No |
| GO:0008324 | cation transmembrane transporter activity | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:1990204 | oxidoreductase complex | No |
| GO:0005215 | transporter activity | No |
| GO:0006811 | ion transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 38 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 10 | 32 | 22 |
| 2 | 53 | 75 | 22 |
| 3 | 90 | 112 | 22 |
| 4 | 146 | 168 | 22 |
| 5 | 178 | 197 | 19 |
| 6 | 209 | 231 | 22 |
| 7 | 290 | 312 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|8267 MAANVFAFPVFLIVFRETLETVIIVSVLLAFLKQTLGGPDRDVQLYKFLRRQVWIGVAAGFFICMVIAGAIIGVW YTVRLNTWETHENIYEGVFCLVASVIITIMGAALLRIGKMQDKWRAKVARTIDAPLRAGSRRWWARLFEKYAMFF LPFITVLREGVEAVVFTAGVSFSAPATAVPLPVFVGLLVGVLVGWLLYKGASTAKLHIFLVISTCLLYLVAAGLF SRGVWHLETQQWNTAVGGDAAETGNGAGSYDIDKSVWHVNCCQPMGPDAGGWGIFNAILGWQNSATYGSVISYNV YWIVVIAGFILMRFRETHGHWPFMKAKAHPGPGSSRSGSESHQGGIQKGTQEATVASTA* |
| Coding | >Hirsu2|8267 ATGGCCGCCAACGTCTTCGCCTTCCCCGTCTTCCTCATCGTCTTCCGAGAGACGCTCGAGACGGTCATCATTGTT TCCGTCTTGCTTGCCTTCCTCAAGCAGACTCTCGGCGGTCCCGACCGCGATGTCCAGCTGTACAAGTTCCTGAGG CGGCAGGTCTGGATCGGCGTTGCCGCCGGCTTCTTTATCTGTATGGTCATTGCCGGCGCCATCATCGGCGTCTGG TATACCGTGCGGCTCAACACATGGGAGACCCATGAGAACATCTATGAGGGCGTCTTCTGCCTTGTCGCGTCCGTC ATCATCACCATCATGGGCGCCGCCCTGCTGCGCATCGGTAAGATGCAGGACAAGTGGCGCGCCAAGGTGGCCAGG ACCATCGACGCGCCCCTCAGGGCCGGCAGCCGCCGCTGGTGGGCGCGCCTCTTCGAGAAATACGCCATGTTCTTT CTCCCCTTCATCACTGTCCTGCGCGAGGGTGTCGAGGCTGTCGTCTTCACCGCCGGCGTCTCCTTCTCCGCCCCG GCCACAGCTGTGCCGCTTCCCGTCTTCGTCGGCCTCCTTGTCGGAGTCCTTGTTGGCTGGCTCCTGTACAAGGGT GCTTCCACGGCCAAGCTCCACATTTTCCTCGTCATCTCGACGTGCCTGCTATATCTCGTCGCCGCCGGTCTCTTC TCCCGAGGCGTCTGGCACTTGGAGACGCAGCAGTGGAATACGGCCGTTGGTGGGGATGCCGCCGAGACCGGGAAT GGGGCTGGATCCTATGACATCGACAAGAGCGTATGGCACGTCAACTGCTGTCAGCCAATGGGCCCGGACGCCGGC GGCTGGGGCATCTTCAACGCCATACTGGGTTGGCAAAACTCGGCGACTTACGGCTCAGTCATCTCCTACAATGTC TACTGGATCGTCGTCATCGCAGGGTTCATCCTCATGCGCTTCCGCGAGACTCACGGCCACTGGCCTTTTATGAAG GCAAAGGCTCATCCCGGGCCCGGCAGCAGTCGCAGCGGAAGTGAGAGTCACCAGGGTGGCATTCAGAAGGGCACA CAGGAGGCGACGGTTGCCTCGACGGCATGA |
| Transcript | >Hirsu2|8267 ATGGCCGCCAACGTCTTCGCCTTCCCCGTCTTCCTCATCGTCTTCCGAGAGACGCTCGAGACGGTCATCATTGTT TCCGTCTTGCTTGCCTTCCTCAAGCAGACTCTCGGCGGTCCCGACCGCGATGTCCAGCTGTACAAGTTCCTGAGG CGGCAGGTCTGGATCGGCGTTGCCGCCGGCTTCTTTATCTGTATGGTCATTGCCGGCGCCATCATCGGCGTCTGG TATACCGTGCGGCTCAACACATGGGAGACCCATGAGAACATCTATGAGGGCGTCTTCTGCCTTGTCGCGTCCGTC ATCATCACCATCATGGGCGCCGCCCTGCTGCGCATCGGTAAGATGCAGGACAAGTGGCGCGCCAAGGTGGCCAGG ACCATCGACGCGCCCCTCAGGGCCGGCAGCCGCCGCTGGTGGGCGCGCCTCTTCGAGAAATACGCCATGTTCTTT CTCCCCTTCATCACTGTCCTGCGCGAGGGTGTCGAGGCTGTCGTCTTCACCGCCGGCGTCTCCTTCTCCGCCCCG GCCACAGCTGTGCCGCTTCCCGTCTTCGTCGGCCTCCTTGTCGGAGTCCTTGTTGGCTGGCTCCTGTACAAGGGT GCTTCCACGGCCAAGCTCCACATTTTCCTCGTCATCTCGACGTGCCTGCTATATCTCGTCGCCGCCGGTCTCTTC TCCCGAGGCGTCTGGCACTTGGAGACGCAGCAGTGGAATACGGCCGTTGGTGGGGATGCCGCCGAGACCGGGAAT GGGGCTGGATCCTATGACATCGACAAGAGCGTATGGCACGTCAACTGCTGTCAGCCAATGGGCCCGGACGCCGGC GGCTGGGGCATCTTCAACGCCATACTGGGTTGGCAAAACTCGGCGACTTACGGCTCAGTCATCTCCTACAATGTC TACTGGATCGTCGTCATCGCAGGGTTCATCCTCATGCGCTTCCGCGAGACTCACGGCCACTGGCCTTTTATGAAG GCAAAGGCTCATCCCGGGCCCGGCAGCAGTCGCAGCGGAAGTGAGAGTCACCAGGGTGGCATTCAGAAGGGCACA CAGGAGGCGACGGTTGCCTCGACGGCATGA |
| Gene | >Hirsu2|8267 ATGGCCGCCAACGTCTTCGCCTTCCCCGTCTTCCTCATCGTCTTCCGAGAGACGCTCGAGACGGTCATCATTGTT TCCGTCTTGCTTGCCTTCCTCAAGCAGACTCTCGGCGGTCCCGACCGCGATGTCCAGCTGTACAAGTTCCTGAGG CGGCAGGTAAGCCCCCTCTCTCCCTTCACCCATTCCCTCCCCTCTGACCCTCGCTCGAAGGGACAGTGGGCTCCT GCTGACGGAATCTCAAGGTCTGGATCGGCGTTGCCGCCGGCTTCTTTATCTGTATGGTCATTGCCGGCGCCATCA TCGGCGTCTGGTATACCGTGCGGCTCAACACATGGGAGACCCATGAGAACATCTATGAGGGCGTCTTCTGCCTTG TCGCGTCCGTCATCATCACCATCATGGGCGCCGCCCTGCTGCGCATCGGTAAGATGCAGGACAAGTGGCGCGCCA AGGTGGCCAGGACCATCGACGCGCCCCTCAGGGCCGGCAGCCGCCGCTGGTGGGCGCGCCTCTTCGAGAAATACG CCATGTTCTTTCTCCCCTTCATCACTGTCCTGCGCGAGGGTGTCGAGGCTGTCGTCTTCACCGCCGGCGTCTCCT TCTCCGCCCCGGCCACAGCTGTGCCGCTTCCCGTCTTCGTCGGCCTCCTTGTCGGAGTCCTTGTTGGCTGGCTCC TGTACAAGTGCGTGTCCTCGTCAGCCCCCGACCACTTACCCCTGCCGTCTCCGTTCTAAACAGCAAGAGTAGGGG TGCTTCCACGGCCAAGCTCCACATTTTCCTCGTCATCTCGACGTGCCTGCTATATCTCGTCGCCGCCGGTCTCTT CTCCCGAGGCGTCTGGCACTTGGAGACGCAGCAGTGGAATACGGCCGTTGGTGGGGATGCCGCCGAGACCGGGAA TGGGGCTGGATCCTATGACATCGACAAGAGCGTATGGCACGTCAACGTAGGTCGCCTCGGGACCCAGACTGGCTC TGATGTCTGCCGTACTGACCAGATGCATAGTGCTGTCAGCCAATGGGCCCGGACGCCGGCGGCTGGGGCATCTTC AACGCCATACTGGGTTGGCAAAACTCGGCGACTTACGGCTCAGTCATCTCCTACAATGTCTACTGGATCGTCGTC ATCGCAGGGTTCATCCTCATGCGCTTCCGCGAGACTCACGGCCACTGGCCTTTTATGAAGGCAAAGGCTCATCCC GGGCCCGGCAGCAGTCGCAGCGGAAGTGAGAGTCACCAGGGTGGCATTCAGAAGGGCACACAGGAGGCGACGGTT GCCTCGACGGCATGA |