Protein ID | Hirsu2|8258 |
Gene name | |
Location | Contig_527:4208..4677 |
Strand | + |
Gene length (bp) | 469 |
Transcript length (bp) | 408 |
Coding sequence length (bp) | 408 |
Protein length (aa) | 136 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1017 | 0.0502 | 0.9534 | 0.1099 | 0.0937 | 0.0105 | 0.1236 | 0.1025 | 0.0513 | 0.0017 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 19 | 0.799561 |
Orthofinder run ID | 4 |
Orthogroup | 793 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|8258 MRTYHAITAAAALCGAVAGQAIPPASRNFARVPLEEPLTWTPGYALLLDHTIGRFIGELTNFTRDAWAQHVLDQC RAVPDCTSTFSYSAYAVKPDDAKMRFWFGYIYGGGPTTPGNYTRYLDVLEDTVAYTVVSS* |
Coding | >Hirsu2|8258 ATGCGCACCTATCACGCAATCACCGCGGCCGCGGCCTTGTGCGGTGCCGTGGCCGGACAGGCGATTCCTCCAGCG TCCCGCAACTTCGCCCGCGTCCCGCTCGAAGAACCTCTGACCTGGACGCCTGGATACGCTCTGTTGCTGGACCAC ACCATCGGGCGGTTCATCGGCGAGCTGACCAACTTCACGCGCGATGCGTGGGCGCAGCACGTCCTGGATCAGTGC AGAGCTGTTCCCGACTGCACGTCGACCTTTTCCTACTCAGCATACGCAGTTAAGCCCGACGACGCCAAGATGCGG TTTTGGTTCGGCTACATCTATGGGGGGGGGCCAACGACACCGGGCAATTACACGAGGTACCTCGACGTGTTAGAA GACACCGTTGCGTATACCGTCGTCAGCAGTTGA |
Transcript | >Hirsu2|8258 ATGCGCACCTATCACGCAATCACCGCGGCCGCGGCCTTGTGCGGTGCCGTGGCCGGACAGGCGATTCCTCCAGCG TCCCGCAACTTCGCCCGCGTCCCGCTCGAAGAACCTCTGACCTGGACGCCTGGATACGCTCTGTTGCTGGACCAC ACCATCGGGCGGTTCATCGGCGAGCTGACCAACTTCACGCGCGATGCGTGGGCGCAGCACGTCCTGGATCAGTGC AGAGCTGTTCCCGACTGCACGTCGACCTTTTCCTACTCAGCATACGCAGTTAAGCCCGACGACGCCAAGATGCGG TTTTGGTTCGGCTACATCTATGGGGGGGGGCCAACGACACCGGGCAATTACACGAGGTACCTCGACGTGTTAGAA GACACCGTTGCGTATACCGTCGTCAGCAGTTGA |
Gene | >Hirsu2|8258 ATGCGCACCTATCACGCAATCACCGCGGCCGCGGCCTTGTGCGGTGCCGTGGCCGGACAGGCGATTCCTCCAGCG TCCCGCAACTTCGCCCGCGTCCCGCTCGAAGAACCTCTGACCTGGACGCCTGGATACGCTCTGTTGCTGGACCAC ACCATCGGGCGGTTCATCGGCGAGCTGACCAACTTCACGCGCGATGCGTGGGCGCAGCACGTCCTGGATCAGTGC AGAGCTGTTCCCGACTGCACGTCGACCTTTTCCTACTCAGGTGAGGGCCCCTCATCCAGAACCAGATGGCGGCAC CGAAAGCTCACTTCTTTCGCTCGCAGCATACGCAGTTAAGCCCGACGACGCCAAGATGCGGTTTTGGTTCGGCTA CATCTATGGGGGGGGGCCAACGACACCGGGCAATTACACGAGGTACCTCGACGTGTTAGAAGACACCGTTGCGTA TACCGTCGTCAGCAGTTGA |