© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|8255 |
| Gene name | |
| Location | Contig_526:15778..17256 |
| Strand | - |
| Gene length (bp) | 1478 |
| Transcript length (bp) | 1299 |
| Coding sequence length (bp) | 1299 |
| Protein length (aa) | 433 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02076 | STE3 | Pheromone A receptor | 3.1E-43 | 2 | 228 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004932 | mating-type factor pheromone receptor activity | Yes |
| GO:0007186 | G protein-coupled receptor signaling pathway | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0008150 | biological_process | No |
| GO:0008528 | G protein-coupled peptide receptor activity | No |
| GO:0007165 | signal transduction | No |
| GO:0050794 | regulation of cellular process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0009987 | cellular process | No |
| GO:0016503 | pheromone receptor activity | No |
| GO:0001653 | peptide receptor activity | No |
| GO:0065007 | biological regulation | No |
| GO:0004930 | G protein-coupled receptor activity | No |
| GO:0060089 | molecular transducer activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0004888 | transmembrane signaling receptor activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0050789 | regulation of biological process | No |
| GO:0038023 | signaling receptor activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 23 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 10 | 32 | 22 |
| 2 | 45 | 64 | 19 |
| 3 | 87 | 109 | 22 |
| 4 | 139 | 161 | 22 |
| 5 | 196 | 218 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|8255 LHNAATSLFLTCLLAVMGSTAGQVGLARAAALTPGERRRRRRRQALVMFPLPLLQLAWTWPAAARRYEVGALVGC VWAAYPAWPNLVFFVLPPVVISLATSAYAVLTYFRFRQIAKTTESALSSDRRASRRSQRTKRRLYMMVTSILVPY LPLVIAVAVGNVLERPPREPYSFDAVHHRAAPLPWHVVLFSPSSEIGWASLNNCYVNVLVALPIFLFFGTTTDAV NEYRAAALFLRLGRLFPGLETEYDPDRTTSSAGATSVGSGRTANTSGGFSIPSFKRLSPGSPQLPGGGPNVRTVE FAPTSAADPERGAADPARRRNPFLFRTRLNLPHLFGTPSLFRPPPPLPGPPSLLRPPPPLPAPPVHAPPHEPQWG LRPAPARPDDDDDDDDGADQPSPAIPHPAYLRTADLEAVTGRRPGPASGALPSNFSC* |
| Coding | >Hirsu2|8255 CTGCACAACGCCGCCACCTCGCTCTTCCTGACCTGCCTGCTGGCCGTGATGGGCAGCACGGCGGGCCAGGTCGGG CTGGCCCGCGCCGCGGCGCTGACGCCGGGCGAGCGCCGGCGCCGGCGCCGGCGCCAGGCCCTCGTCATGTTCCCC CTGCCGCTGCTGCAGCTGGCCTGGACCTGGCCCGCCGCCGCCCGCCGGTACGAGGTCGGCGCCCTGGTCGGCTGC GTCTGGGCCGCCTACCCGGCCTGGCCGAACCTGGTCTTCTTCGTCCTGCCGCCCGTCGTCATCTCGCTCGCCACC AGCGCCTATGCCGTCCTCACCTACTTCCGCTTCCGCCAGATCGCCAAGACGACCGAGTCGGCCCTCTCCAGCGAC CGCCGCGCCAGCCGCCGCAGCCAGCGGACCAAGCGCCGGCTGTACATGATGGTCACGTCCATCCTGGTGCCCTAC CTGCCGCTCGTCATCGCCGTCGCCGTCGGCAACGTGCTGGAGCGCCCGCCGCGCGAGCCGTACAGCTTCGACGCC GTCCACCACCGCGCCGCCCCCTTGCCCTGGCACGTCGTCCTCTTCTCGCCCTCGTCCGAGATCGGCTGGGCCAGC CTCAACAACTGCTACGTCAACGTCCTCGTCGCCCTCCCCATCTTCCTCTTCTTCGGCACCACCACCGACGCCGTC AACGAGTACCGCGCCGCCGCCCTCTTCCTCCGCCTCGGCCGCCTCTTCCCCGGCCTCGAGACCGAGTACGACCCG GACCGGACCACCTCCAGCGCTGGCGCTACCTCCGTGGGCTCCGGCCGCACTGCCAACACGTCGGGGGGCTTCTCC ATCCCGTCCTTCAAGCGCCTCAGCCCCGGATCCCCTCAGCTCCCCGGCGGCGGCCCGAACGTCCGGACCGTCGAG TTCGCCCCCACGTCCGCTGCCGACCCGGAGCGCGGCGCCGCCGATCCCGCCCGCCGCCGCAATCCCTTTCTCTTC CGCACCCGCCTCAACCTCCCGCACCTCTTCGGCACCCCGAGCCTCTTCAGGCCGCCGCCTCCTCTTCCCGGCCCC CCGAGCCTCTTGAGGCCGCCGCCTCCTCTCCCCGCCCCCCCTGTGCACGCCCCGCCGCACGAGCCGCAGTGGGGT CTTCGCCCGGCCCCGGCCCGGCCCGACGACGACGACGACGACGACGACGGCGCGGACCAGCCGTCCCCGGCCATC CCCCACCCGGCGTACCTGCGGACCGCCGACCTCGAGGCCGTCACGGGACGCCGGCCCGGCCCGGCGTCTGGCGCT CTGCCTTCTAATTTCTCTTGCTGA |
| Transcript | >Hirsu2|8255 CTGCACAACGCCGCCACCTCGCTCTTCCTGACCTGCCTGCTGGCCGTGATGGGCAGCACGGCGGGCCAGGTCGGG CTGGCCCGCGCCGCGGCGCTGACGCCGGGCGAGCGCCGGCGCCGGCGCCGGCGCCAGGCCCTCGTCATGTTCCCC CTGCCGCTGCTGCAGCTGGCCTGGACCTGGCCCGCCGCCGCCCGCCGGTACGAGGTCGGCGCCCTGGTCGGCTGC GTCTGGGCCGCCTACCCGGCCTGGCCGAACCTGGTCTTCTTCGTCCTGCCGCCCGTCGTCATCTCGCTCGCCACC AGCGCCTATGCCGTCCTCACCTACTTCCGCTTCCGCCAGATCGCCAAGACGACCGAGTCGGCCCTCTCCAGCGAC CGCCGCGCCAGCCGCCGCAGCCAGCGGACCAAGCGCCGGCTGTACATGATGGTCACGTCCATCCTGGTGCCCTAC CTGCCGCTCGTCATCGCCGTCGCCGTCGGCAACGTGCTGGAGCGCCCGCCGCGCGAGCCGTACAGCTTCGACGCC GTCCACCACCGCGCCGCCCCCTTGCCCTGGCACGTCGTCCTCTTCTCGCCCTCGTCCGAGATCGGCTGGGCCAGC CTCAACAACTGCTACGTCAACGTCCTCGTCGCCCTCCCCATCTTCCTCTTCTTCGGCACCACCACCGACGCCGTC AACGAGTACCGCGCCGCCGCCCTCTTCCTCCGCCTCGGCCGCCTCTTCCCCGGCCTCGAGACCGAGTACGACCCG GACCGGACCACCTCCAGCGCTGGCGCTACCTCCGTGGGCTCCGGCCGCACTGCCAACACGTCGGGGGGCTTCTCC ATCCCGTCCTTCAAGCGCCTCAGCCCCGGATCCCCTCAGCTCCCCGGCGGCGGCCCGAACGTCCGGACCGTCGAG TTCGCCCCCACGTCCGCTGCCGACCCGGAGCGCGGCGCCGCCGATCCCGCCCGCCGCCGCAATCCCTTTCTCTTC CGCACCCGCCTCAACCTCCCGCACCTCTTCGGCACCCCGAGCCTCTTCAGGCCGCCGCCTCCTCTTCCCGGCCCC CCGAGCCTCTTGAGGCCGCCGCCTCCTCTCCCCGCCCCCCCTGTGCACGCCCCGCCGCACGAGCCGCAGTGGGGT CTTCGCCCGGCCCCGGCCCGGCCCGACGACGACGACGACGACGACGACGGCGCGGACCAGCCGTCCCCGGCCATC CCCCACCCGGCGTACCTGCGGACCGCCGACCTCGAGGCCGTCACGGGACGCCGGCCCGGCCCGGCGTCTGGCGCT CTGCCTTCTAATTTCTCTTGCTGA |
| Gene | >Hirsu2|8255 CTGCACAACGCCGCCACCTCGCTCTTCCTGACCTGCCTGCTGGCCGTGATGGGCAGCACGGCGGGCCAGGTCGGG CTGGCCCGCGCCGCGGCGCTGACGCCGGGCGAGCGCCGGCGCCGGCGCCGGCGCCAGGCCCTCGTCATGTTCCCC CTGCCGCTGCTGCAGCTGGCCTGGACCTGGCCCGCCGCCGCCCGCCGGTACGAGGTCGGCGCCCTGGTCGGCTGC GTCTGGGCCGCCTACCCGGCCTGGCCGAACCTGGTCTTCTTCGTCCTGCCGCCCGTCGTCATCTCGCTCGCCACC AGCGCCTATGCCGGTACGTGGCCGAGACCGCGGGGGCTCAGAGCGACATGCTCGAATACGTGCCGGCACGAGACT GACCCCTTACCTCCCTAGTCCTCACCTACTTCCGCTTCCGCCAGATCGCCAAGACGACCGAGTCGGCCCTCTCCA GCGACCGCCGCGCCAGCCGCCGCAGCCAGCGGACCAAGCGCCGGCTGTACATGATGGTCACGTCCATCCTGGTGC CCTACCTGCCGCTCGTCATCGCCGTCGCCGTCGGCAACGTGCTGGAGCGCCCGCCGCGCGAGCCGTACAGCTTCG ACGCCGTCCACCACCGCGCCGCCCCCTTGCCCTGGCACGTCGTCCTCTTCTCGCCCTCGTCCGAGATCGGCTGGG CCAGCCTCAACAACTGCTACGTCAACGTCCTCGTCGCCCTCCCCATCTTCCTCTTCTTCGGCACCACCACCGACG CCGTCAACGAGTACCGCGCCGCCGCCCTCTTCCTCCGCCTCGGCCGCCTCTTCCCCGGCCTCGAGACCGAGTACG ACCCGGACCGGACCACCTCCAGCGCTGGCGCTACCTCCGTGGGCTCCGGCCGCACTGCCAACACGTCGGGGGGGT AAGTCTGCTACTACCTTCTCTCTATATCCCTCTGTCCCTCTCTTATACACACACGTCCTGCCCCTGGCCGACCCT CGCTAACCGCCTCACCCTCCAGCTTCTCCATCCCGTCCTTCAAGCGCCTCAGCCCCGGATCCCCTCAGCTCCCCG GCGGCGGCCCGAACGTCCGGACCGTCGAGTTCGCCCCCACGTCCGCTGCCGACCCGGAGCGCGGCGCCGCCGATC CCGCCCGCCGCCGCAATCCCTTTCTCTTCCGCACCCGCCTCAACCTCCCGCACCTCTTCGGCACCCCGAGCCTCT TCAGGCCGCCGCCTCCTCTTCCCGGCCCCCCGAGCCTCTTGAGGCCGCCGCCTCCTCTCCCCGCCCCCCCTGTGC ACGCCCCGCCGCACGAGCCGCAGTGGGGTCTTCGCCCGGCCCCGGCCCGGCCCGACGACGACGACGACGACGACG ACGGCGCGGACCAGCCGTCCCCGGCCATCCCCCACCCGGCGTACCTGCGGACCGCCGACCTCGAGGCCGTCACGG GACGCCGGCCCGGCCCGGCGTCTGGCGCTCTGCCTTCTAATTTCTCTTGCTGA |