Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8247
Gene name
LocationContig_525:11978..13076
Strand-
Gene length (bp)1098
Transcript length (bp)1098
Coding sequence length (bp)1098
Protein length (aa) 366

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.1749 0.0718 0.9552 0.1447 0.0707 0.0109 0.1944 0.2401 0.1927 0.0029

SignalP

SignalP signal predicted Location Score
Yes 1 - 19 0.999749

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup631
Change Orthofinder run
Species Protein ID
Ophiocordyceps subramaniannii Hirsu2|10178
Ophiocordyceps subramaniannii Hirsu2|2123
Ophiocordyceps subramaniannii Hirsu2|3471
Ophiocordyceps subramaniannii Hirsu2|8247 (this protein)
Ophiocordyceps subramaniannii Hirsu2|8467

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8247
MRYSLILVALAALESVGLAADACEPDKVEGEASSNSWAEAEAGASVGEQNSPGTNVSTKARPVTTGAGGTLRLTG
DAGVAGVNMKLSTKDVVQQVKQAGLSKKVAQEVVPVAGKAVEEVGGMVDTKQKLAIVMSKVAHKAVEAAGNLAAD
NNATHLEQFTAALLTVNGTITQVLGQSDEAEVTLGTCVSAAAAGESLNVIVDVTMATMKAFEAKKDKAKTAADGG
SGDANKGYNGVVIRKAAEQQCTLEECRTGVKVYVDVLSQGKSHDVAGTIIVTLSAIGDFKSVDVTAKADFVESVV
SNDGSPDTVTKIGKAMTKLHLGREDSNRLKEVAAAAANELKQFADSTRAPASEQENPASNTAQQN*
Coding >Hirsu2|8247
ATGAGATACTCGCTCATTCTCGTTGCCCTCGCGGCTCTCGAGTCTGTCGGGCTTGCTGCAGATGCATGCGAACCC
GACAAGGTAGAGGGCGAGGCCAGCTCCAACTCCTGGGCCGAAGCAGAAGCCGGTGCCAGCGTAGGCGAGCAAAAC
TCGCCCGGGACCAACGTCTCGACCAAGGCCAGGCCGGTCACGACCGGGGCCGGCGGCACGCTCCGGCTTACGGGC
GATGCCGGCGTTGCGGGCGTTAACATGAAGCTTAGCACCAAGGACGTGGTTCAGCAAGTCAAGCAGGCCGGCCTC
TCCAAGAAGGTCGCCCAGGAGGTGGTCCCGGTAGCCGGAAAGGCGGTCGAGGAAGTCGGGGGCATGGTCGATACG
AAGCAGAAACTTGCCATCGTGATGAGCAAGGTAGCTCATAAGGCGGTCGAGGCGGCGGGCAACCTGGCGGCCGAT
AACAACGCGACGCATCTCGAGCAGTTCACGGCAGCCCTGTTGACGGTCAACGGAACCATCACGCAGGTCTTGGGC
CAGAGTGACGAAGCCGAAGTCACCCTCGGCACCTGCGTGTCCGCCGCCGCTGCCGGGGAGAGCCTCAACGTGATC
GTCGACGTCACCATGGCAACGATGAAGGCCTTCGAAGCGAAAAAAGACAAAGCAAAGACAGCTGCCGACGGCGGT
TCTGGCGACGCCAACAAGGGCTACAACGGCGTCGTCATCAGGAAAGCAGCCGAGCAGCAGTGCACTTTAGAAGAG
TGCAGGACCGGCGTCAAAGTCTACGTCGACGTGTTGAGCCAGGGTAAAAGCCACGACGTCGCGGGCACTATAATC
GTGACGCTCAGCGCCATAGGCGACTTCAAGTCAGTCGACGTCACGGCCAAGGCCGATTTTGTCGAAAGCGTCGTT
TCCAACGACGGCAGCCCTGATACCGTGACCAAGATTGGAAAGGCCATGACGAAACTCCACCTCGGTCGCGAGGAT
AGCAATCGACTCAAGGAAGTGGCCGCCGCGGCCGCCAATGAGTTGAAGCAGTTCGCCGATTCGACGCGAGCCCCG
GCCTCGGAGCAGGAAAACCCGGCTTCCAACACGGCGCAGCAGAATTAA
Transcript >Hirsu2|8247
ATGAGATACTCGCTCATTCTCGTTGCCCTCGCGGCTCTCGAGTCTGTCGGGCTTGCTGCAGATGCATGCGAACCC
GACAAGGTAGAGGGCGAGGCCAGCTCCAACTCCTGGGCCGAAGCAGAAGCCGGTGCCAGCGTAGGCGAGCAAAAC
TCGCCCGGGACCAACGTCTCGACCAAGGCCAGGCCGGTCACGACCGGGGCCGGCGGCACGCTCCGGCTTACGGGC
GATGCCGGCGTTGCGGGCGTTAACATGAAGCTTAGCACCAAGGACGTGGTTCAGCAAGTCAAGCAGGCCGGCCTC
TCCAAGAAGGTCGCCCAGGAGGTGGTCCCGGTAGCCGGAAAGGCGGTCGAGGAAGTCGGGGGCATGGTCGATACG
AAGCAGAAACTTGCCATCGTGATGAGCAAGGTAGCTCATAAGGCGGTCGAGGCGGCGGGCAACCTGGCGGCCGAT
AACAACGCGACGCATCTCGAGCAGTTCACGGCAGCCCTGTTGACGGTCAACGGAACCATCACGCAGGTCTTGGGC
CAGAGTGACGAAGCCGAAGTCACCCTCGGCACCTGCGTGTCCGCCGCCGCTGCCGGGGAGAGCCTCAACGTGATC
GTCGACGTCACCATGGCAACGATGAAGGCCTTCGAAGCGAAAAAAGACAAAGCAAAGACAGCTGCCGACGGCGGT
TCTGGCGACGCCAACAAGGGCTACAACGGCGTCGTCATCAGGAAAGCAGCCGAGCAGCAGTGCACTTTAGAAGAG
TGCAGGACCGGCGTCAAAGTCTACGTCGACGTGTTGAGCCAGGGTAAAAGCCACGACGTCGCGGGCACTATAATC
GTGACGCTCAGCGCCATAGGCGACTTCAAGTCAGTCGACGTCACGGCCAAGGCCGATTTTGTCGAAAGCGTCGTT
TCCAACGACGGCAGCCCTGATACCGTGACCAAGATTGGAAAGGCCATGACGAAACTCCACCTCGGTCGCGAGGAT
AGCAATCGACTCAAGGAAGTGGCCGCCGCGGCCGCCAATGAGTTGAAGCAGTTCGCCGATTCGACGCGAGCCCCG
GCCTCGGAGCAGGAAAACCCGGCTTCCAACACGGCGCAGCAGAATTAA
Gene >Hirsu2|8247
ATGAGATACTCGCTCATTCTCGTTGCCCTCGCGGCTCTCGAGTCTGTCGGGCTTGCTGCAGATGCATGCGAACCC
GACAAGGTAGAGGGCGAGGCCAGCTCCAACTCCTGGGCCGAAGCAGAAGCCGGTGCCAGCGTAGGCGAGCAAAAC
TCGCCCGGGACCAACGTCTCGACCAAGGCCAGGCCGGTCACGACCGGGGCCGGCGGCACGCTCCGGCTTACGGGC
GATGCCGGCGTTGCGGGCGTTAACATGAAGCTTAGCACCAAGGACGTGGTTCAGCAAGTCAAGCAGGCCGGCCTC
TCCAAGAAGGTCGCCCAGGAGGTGGTCCCGGTAGCCGGAAAGGCGGTCGAGGAAGTCGGGGGCATGGTCGATACG
AAGCAGAAACTTGCCATCGTGATGAGCAAGGTAGCTCATAAGGCGGTCGAGGCGGCGGGCAACCTGGCGGCCGAT
AACAACGCGACGCATCTCGAGCAGTTCACGGCAGCCCTGTTGACGGTCAACGGAACCATCACGCAGGTCTTGGGC
CAGAGTGACGAAGCCGAAGTCACCCTCGGCACCTGCGTGTCCGCCGCCGCTGCCGGGGAGAGCCTCAACGTGATC
GTCGACGTCACCATGGCAACGATGAAGGCCTTCGAAGCGAAAAAAGACAAAGCAAAGACAGCTGCCGACGGCGGT
TCTGGCGACGCCAACAAGGGCTACAACGGCGTCGTCATCAGGAAAGCAGCCGAGCAGCAGTGCACTTTAGAAGAG
TGCAGGACCGGCGTCAAAGTCTACGTCGACGTGTTGAGCCAGGGTAAAAGCCACGACGTCGCGGGCACTATAATC
GTGACGCTCAGCGCCATAGGCGACTTCAAGTCAGTCGACGTCACGGCCAAGGCCGATTTTGTCGAAAGCGTCGTT
TCCAACGACGGCAGCCCTGATACCGTGACCAAGATTGGAAAGGCCATGACGAAACTCCACCTCGGTCGCGAGGAT
AGCAATCGACTCAAGGAAGTGGCCGCCGCGGCCGCCAATGAGTTGAAGCAGTTCGCCGATTCGACGCGAGCCCCG
GCCTCGGAGCAGGAAAACCCGGCTTCCAACACGGCGCAGCAGAATTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail