Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|8245
Gene name
LocationContig_525:2163..3309
Strand-
Gene length (bp)1146
Transcript length (bp)1002
Coding sequence length (bp)1002
Protein length (aa) 334

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07978 NIPSNAP NIPSNAP 3.1E-08 125 221
PF07978 NIPSNAP NIPSNAP 7.8E-29 234 331

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O55125|NIPS1_MOUSE Protein NipSnap homolog 1 OS=Mus musculus GN=Nipsnap1 PE=1 SV=1 121 332 7.0E-47
sp|Q9BPW8|NIPS1_HUMAN Protein NipSnap homolog 1 OS=Homo sapiens GN=NIPSNAP1 PE=1 SV=1 121 332 1.0E-46
sp|Q9PU58|NIPS2_DANRE Protein NipSnap homolog 2 OS=Danio rerio GN=gbas PE=2 SV=2 121 332 2.0E-46
sp|O75323|NIPS2_HUMAN Protein NipSnap homolog 2 OS=Homo sapiens GN=GBAS PE=1 SV=1 121 332 2.0E-45
sp|O55126|NIPS2_MOUSE Protein NipSnap homolog 2 OS=Mus musculus GN=Gbas PE=1 SV=1 121 332 4.0E-45
[Show all]
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Swissprot ID Swissprot Description Start End E-value
sp|O55125|NIPS1_MOUSE Protein NipSnap homolog 1 OS=Mus musculus GN=Nipsnap1 PE=1 SV=1 121 332 7.0E-47
sp|Q9BPW8|NIPS1_HUMAN Protein NipSnap homolog 1 OS=Homo sapiens GN=NIPSNAP1 PE=1 SV=1 121 332 1.0E-46
sp|Q9PU58|NIPS2_DANRE Protein NipSnap homolog 2 OS=Danio rerio GN=gbas PE=2 SV=2 121 332 2.0E-46
sp|O75323|NIPS2_HUMAN Protein NipSnap homolog 2 OS=Homo sapiens GN=GBAS PE=1 SV=1 121 332 2.0E-45
sp|O55126|NIPS2_MOUSE Protein NipSnap homolog 2 OS=Mus musculus GN=Gbas PE=1 SV=1 121 332 4.0E-45
sp|Q9VXK0|NIPSN_DROME Protein NipSnap OS=Drosophila melanogaster GN=Nipsnap PE=2 SV=2 108 331 5.0E-41
sp|P34492|YMQ1_CAEEL Putative NipSnap protein K02D10.1 OS=Caenorhabditis elegans GN=K02D10.1 PE=2 SV=4 80 330 2.0E-35
sp|Q54I58|NIPSN_DICDI Protein NipSnap homolog OS=Dictyostelium discoideum GN=nipsnap PE=3 SV=1 115 327 5.0E-16
sp|Q9UFN0|NPS3A_HUMAN Protein NipSnap homolog 3A OS=Homo sapiens GN=NIPSNAP3A PE=1 SV=2 200 330 2.0E-09
sp|Q5RAA9|NPS3A_PONAB Protein NipSnap homolog 3A OS=Pongo abelii GN=NIPSNAP3A PE=2 SV=1 101 332 2.0E-08
sp|Q9UFN0|NPS3A_HUMAN Protein NipSnap homolog 3A OS=Homo sapiens GN=NIPSNAP3A PE=1 SV=2 101 332 4.0E-08
sp|Q9BS92|NPS3B_HUMAN Protein NipSnap homolog 3B OS=Homo sapiens GN=NIPSNAP3B PE=2 SV=1 200 330 6.0E-08
sp|Q9BS92|NPS3B_HUMAN Protein NipSnap homolog 3B OS=Homo sapiens GN=NIPSNAP3B PE=2 SV=1 158 332 2.0E-07
sp|Q9CQE1|NPS3B_MOUSE Protein NipSnap homolog 3B OS=Mus musculus GN=Nipsnap3b PE=1 SV=1 129 332 4.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|8245
MLRPGLARRAAAAAAFAPAGTRALATTAAALRLAKTPSMGDINPSSASVDSFNSKQKAFREQLAEAQREQGARVT
AQAKQKEQDRKSGPLSNLIYGTKEGREMEAQIQASFSQVLARGKYVHSIVLHEVKPDMVDEYVDLIGTWYPQIAN
ATENKVHLVGSWRTEIGDCDTFVHIWEYQKYAGYHESRYSITHHPQFAELDRKLKRMINSKSISLMQEFSFWPTT
APRELGGIFELRSYELHPGNLLEWETHWRRGLKARREVMEGVGAWFVQIGDLNTVHHLWQFANLEERRERREKSW
SVEGWSDTVHKTVPLIQTMKSRIMIAMPWSPVA*
Coding >Hirsu2|8245
ATGTTGCGTCCAGGTCTCGCCCGGCGTGCCGCCGCCGCAGCGGCATTCGCCCCTGCTGGCACCAGGGCGCTGGCC
ACCACCGCGGCCGCCCTCAGGCTGGCCAAGACGCCCTCGATGGGCGACATCAACCCTTCGTCCGCCTCGGTCGAC
TCCTTCAACAGCAAGCAAAAGGCATTCCGGGAGCAGCTGGCAGAGGCGCAGAGGGAGCAGGGAGCACGAGTCACT
GCCCAGGCCAAGCAGAAGGAGCAGGACCGCAAGTCGGGCCCCCTCTCCAACCTCATCTACGGCACCAAGGAGGGG
AGGGAGATGGAGGCCCAGATCCAGGCCAGCTTCAGCCAGGTCTTGGCCCGGGGCAAGTATGTACACTCCATAGTC
CTCCACGAGGTCAAGCCCGACATGGTGGACGAGTACGTCGACCTCATCGGTACATGGTATCCGCAGATCGCCAAC
GCGACGGAGAACAAGGTACACTTGGTGGGGAGCTGGCGCACCGAGATAGGTGACTGCGACACGTTTGTGCACATC
TGGGAATACCAGAAGTACGCGGGCTACCACGAGTCCAGATACTCCATCACCCACCATCCCCAGTTTGCCGAGCTA
GACCGGAAGCTCAAACGAATGATCAACTCCAAGAGCATCTCTCTCATGCAAGAGTTCTCCTTCTGGCCCACGACC
GCCCCTCGAGAGCTGGGCGGAATCTTCGAGCTTCGATCGTACGAGCTGCACCCAGGCAACCTGCTGGAGTGGGAG
ACACACTGGAGGCGCGGCCTCAAGGCCCGCCGCGAGGTCATGGAGGGCGTGGGCGCGTGGTTCGTTCAAATAGGA
GACCTGAACACGGTCCACCACCTCTGGCAGTTTGCTAACCTGGAGGAGAGGCGCGAGCGCCGGGAGAAGAGCTGG
TCCGTTGAGGGATGGAGCGACACGGTCCACAAGACGGTGCCTCTGATCCAGACCATGAAGTCGAGGATCATGATC
GCCATGCCGTGGTCGCCCGTGGCCTAA
Transcript >Hirsu2|8245
ATGTTGCGTCCAGGTCTCGCCCGGCGTGCCGCCGCCGCAGCGGCATTCGCCCCTGCTGGCACCAGGGCGCTGGCC
ACCACCGCGGCCGCCCTCAGGCTGGCCAAGACGCCCTCGATGGGCGACATCAACCCTTCGTCCGCCTCGGTCGAC
TCCTTCAACAGCAAGCAAAAGGCATTCCGGGAGCAGCTGGCAGAGGCGCAGAGGGAGCAGGGAGCACGAGTCACT
GCCCAGGCCAAGCAGAAGGAGCAGGACCGCAAGTCGGGCCCCCTCTCCAACCTCATCTACGGCACCAAGGAGGGG
AGGGAGATGGAGGCCCAGATCCAGGCCAGCTTCAGCCAGGTCTTGGCCCGGGGCAAGTATGTACACTCCATAGTC
CTCCACGAGGTCAAGCCCGACATGGTGGACGAGTACGTCGACCTCATCGGTACATGGTATCCGCAGATCGCCAAC
GCGACGGAGAACAAGGTACACTTGGTGGGGAGCTGGCGCACCGAGATAGGTGACTGCGACACGTTTGTGCACATC
TGGGAATACCAGAAGTACGCGGGCTACCACGAGTCCAGATACTCCATCACCCACCATCCCCAGTTTGCCGAGCTA
GACCGGAAGCTCAAACGAATGATCAACTCCAAGAGCATCTCTCTCATGCAAGAGTTCTCCTTCTGGCCCACGACC
GCCCCTCGAGAGCTGGGCGGAATCTTCGAGCTTCGATCGTACGAGCTGCACCCAGGCAACCTGCTGGAGTGGGAG
ACACACTGGAGGCGCGGCCTCAAGGCCCGCCGCGAGGTCATGGAGGGCGTGGGCGCGTGGTTCGTTCAAATAGGA
GACCTGAACACGGTCCACCACCTCTGGCAGTTTGCTAACCTGGAGGAGAGGCGCGAGCGCCGGGAGAAGAGCTGG
TCCGTTGAGGGATGGAGCGACACGGTCCACAAGACGGTGCCTCTGATCCAGACCATGAAGTCGAGGATCATGATC
GCCATGCCGTGGTCGCCCGTGGCCTAA
Gene >Hirsu2|8245
ATGTTGCGTCCAGGTCTCGCCCGGCGTGCCGCCGCCGCAGCGGCATTCGCCCCTGCTGGCACCAGGGCGCTGGCC
ACCACCGCGGCCGCCCTCAGGCTGGCCAAGACGCCCTCGATGGGCGACATCAACCCTTCGTCCGCCTCGGTCGAC
TCCTTCAACAGCAAGCAAAAGGCATTCCGGGAGCAGCTGGCAGAGGCGCAGAGGGAGCAGGGAGCACGTGCGTTG
GCCGCCCAAAAGGCTTCTGCCTCCTCGTCCGAGAAGTCGGGCCAAGGCTCATCCGAACACGCTGCAGGAGTCACT
GCCCAGGCCAAGCAGAAGGAGCAGGACCGCAAGTCGGGCCCCCTCTCCAACCTCATCTACGGCACCAAGGAGGGG
AGGGAGATGGAGGCCCAGATCCAGGCCAGCTTCAGCCAGGTCTTGGCCCGGGGCAAGTATGTACACTCCATAGTC
CTCCACGAGGTCAAGCCCGACATGGTGGACGAGTACGTCGACCTCATCGGTACATGGTATCCGCAGATCGCCAAC
GCGACGGAGAACAAGGTACACTTGGTGGGGAGCTGGCGCACCGAGATAGGTGACTGCGACACGTTTGGTGCGTCC
TCGACCACATTCCCAACCCCCCAACGAGCGGCATCGGCGTGGAGACTGACCAAATCCGCAGTGCACATCTGGGAA
TACCAGAAGTACGCGGGCTACCACGAGTCCAGATACTCCATCACCCACCATCCCCAGTTTGCCGAGCTAGACCGG
AAGCTCAAACGAATGATCAACTCCAAGAGCATCTCTCTCATGCAAGAGTTCTCCTTCTGGCCCACGACCGCCCCT
CGAGAGCTGGGCGGAATCTTCGAGCTTCGATCGTACGAGCTGCACCCAGGCAACCTGCTGGAGTGGGAGACACAC
TGGAGGCGCGGCCTCAAGGCCCGCCGCGAGGTCATGGAGGGCGTGGGCGCGTGGTTCGTTCAAATAGGAGACCTG
AACACGGTCCACCACCTCTGGCAGTTTGCTAACCTGGAGGAGAGGCGCGAGCGCCGGGAGAAGAGCTGGTCCGTT
GAGGGATGGAGCGACACGGTCCACAAGACGGTGCCTCTGATCCAGACCATGAAGTCGAGGATCATGATCGCCATG
CCGTGGTCGCCCGTGGCCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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