Protein ID | Hirsu2|8240 |
Gene name | |
Location | Contig_524:9194..11482 |
Strand | - |
Gene length (bp) | 2288 |
Transcript length (bp) | 1983 |
Coding sequence length (bp) | 1983 |
Protein length (aa) | 661 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04082 | Fungal_trans | Fungal specific transcription factor domain | 9.5E-17 | 269 | 465 |
PF00172 | Zn_clus | Fungal Zn(2)-Cys(6) binuclear cluster domain | 1.7E-05 | 6 | 44 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9P6I9|YHDD_SCHPO | Uncharacterized transcriptional regulatory protein C1683.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.13c PE=1 SV=1 | 272 | 532 | 5.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0006351 | transcription, DNA-templated | Yes |
GO:0008270 | zinc ion binding | Yes |
GO:0003677 | DNA binding | Yes |
GO:0006355 | regulation of transcription, DNA-templated | Yes |
GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | Yes |
GO:0097159 | organic cyclic compound binding | No |
GO:0034654 | nucleobase-containing compound biosynthetic process | No |
GO:0009987 | cellular process | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0140110 | transcription regulator activity | No |
GO:0006139 | nucleobase-containing compound metabolic process | No |
GO:0051252 | regulation of RNA metabolic process | No |
GO:1903506 | regulation of nucleic acid-templated transcription | No |
GO:0019219 | regulation of nucleobase-containing compound metabolic process | No |
GO:0032774 | RNA biosynthetic process | No |
GO:0031323 | regulation of cellular metabolic process | No |
GO:0003676 | nucleic acid binding | No |
GO:0008152 | metabolic process | No |
GO:0034641 | cellular nitrogen compound metabolic process | No |
GO:0050794 | regulation of cellular process | No |
GO:2001141 | regulation of RNA biosynthetic process | No |
GO:0009059 | macromolecule biosynthetic process | No |
GO:0071704 | organic substance metabolic process | No |
GO:0044271 | cellular nitrogen compound biosynthetic process | No |
GO:0005488 | binding | No |
GO:0044249 | cellular biosynthetic process | No |
GO:0009058 | biosynthetic process | No |
GO:0010468 | regulation of gene expression | No |
GO:0008150 | biological_process | No |
GO:0046483 | heterocycle metabolic process | No |
GO:0009889 | regulation of biosynthetic process | No |
GO:0046872 | metal ion binding | No |
GO:0090304 | nucleic acid metabolic process | No |
GO:0043170 | macromolecule metabolic process | No |
GO:0044237 | cellular metabolic process | No |
GO:0080090 | regulation of primary metabolic process | No |
GO:0046914 | transition metal ion binding | No |
GO:1901576 | organic substance biosynthetic process | No |
GO:0006725 | cellular aromatic compound metabolic process | No |
GO:0003674 | molecular_function | No |
GO:0019438 | aromatic compound biosynthetic process | No |
GO:0018130 | heterocycle biosynthetic process | No |
GO:0060255 | regulation of macromolecule metabolic process | No |
GO:0097659 | nucleic acid-templated transcription | No |
GO:0051171 | regulation of nitrogen compound metabolic process | No |
GO:1901360 | organic cyclic compound metabolic process | No |
GO:0043167 | ion binding | No |
GO:0044238 | primary metabolic process | No |
GO:0065007 | biological regulation | No |
GO:0043169 | cation binding | No |
GO:0016070 | RNA metabolic process | No |
GO:0006807 | nitrogen compound metabolic process | No |
GO:1901362 | organic cyclic compound biosynthetic process | No |
GO:0031326 | regulation of cellular biosynthetic process | No |
GO:0003700 | DNA-binding transcription factor activity | No |
GO:0019222 | regulation of metabolic process | No |
GO:0050789 | regulation of biological process | No |
GO:0010556 | regulation of macromolecule biosynthetic process | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Nucleus | Nuclear localization signal | 0.3794 | 0.7373 | 0.0772 | 0.0423 | 0.1116 | 0.0023 | 0.0564 | 0.0995 | 0.0703 | 0.0136 |
Transcription Factor Class (based on PFAM domains) |
---|
Fungal Specific TF |
Orthofinder run ID | 4 |
Orthogroup | 4086 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|8240 MARQRRACDTCYKRKIQCDAADEGSQCNWCSHHNLRCTFTRPKARPRSRTLSRAGPRQRLALADGNGPASLLSSA SRSPDPAPARPPNPRRAVDPPRPSHPRGRHVNAALGLIYISGHNFGRFYSASGFPQFTAEGEEWIRSRTGQWPSL PGLSAAAAAAAAPESASPSLLAHRHPPGCAARLPDRLLVETLLKAFVASDLIRVFPLLDGVLFLQIINQAYGSEQ QPPRAIERHSAKACVFALLSLMDPRYFAIPGGMPLDGNACAAEAQALLSDVLEDSSVTALQTLLMLLVYETFSGR LQAASMYHAAACRALFALDAHIIVSEPAEEGELSLQDREARLLRVLFWVCFIFDKDIALRTGQPPIINDEFCDLT LPWRADSSRFTNPGRDGEASSSSSSVSSSSASASASADVMKAPWYHGDLQLTLLKSKACRLLYSATSLRQPNAAL LRTIRELDEELEEWRLTIPAEFSPSLFVSKHPRLAADLDTSRSMVHIELHLNYHYLMNIIHAASGRCVVDGSDPE RAETFGVQSSLELSVEASRSTLIYLSAAAGRLVSEAFWVFSFYPMSALVSLFFNILRYPSQEQATQDVELLGSAS EVIRRMPHNRSLTARETAYLKRIDDFTAELYRLGLCAIAQARDEAAERARAAQLDSSRLG* |
Coding | >Hirsu2|8240 ATGGCCCGGCAAAGGCGAGCCTGCGACACGTGCTACAAGCGAAAGATCCAGTGCGATGCGGCAGACGAGGGTTCG CAATGCAACTGGTGCAGCCACCACAACCTTCGCTGCACCTTTACTCGCCCCAAGGCCCGCCCCAGGAGCCGAACG CTCTCCCGCGCCGGTCCCAGGCAGAGGCTGGCCCTCGCCGACGGCAACGGACCGGCATCGCTGCTCTCCTCCGCC TCTCGTTCCCCGGATCCAGCCCCGGCCCGGCCCCCCAACCCGAGACGGGCCGTCGACCCGCCCCGGCCGTCGCAT CCGCGCGGCAGGCACGTCAATGCCGCCCTCGGCCTGATCTACATCTCCGGCCACAACTTCGGCCGCTTCTACTCC GCCAGCGGCTTCCCGCAGTTCACCGCCGAGGGCGAGGAATGGATCCGCTCCAGGACGGGCCAGTGGCCGAGCCTG CCCGGCCTGTCCGCCGCCGCCGCCGCCGCCGCCGCCCCAGAGTCGGCATCGCCGTCGCTGCTCGCGCACAGGCAC CCGCCCGGCTGCGCGGCCCGGCTTCCCGACAGGCTGCTGGTGGAGACGCTGCTCAAGGCCTTTGTGGCCTCGGAC CTGATCCGCGTCTTCCCCTTGCTGGACGGCGTCCTGTTCCTGCAAATCATCAACCAGGCCTACGGCTCCGAGCAG CAGCCGCCGCGGGCCATTGAGCGCCACAGCGCCAAGGCCTGCGTCTTCGCCCTCCTCTCCCTCATGGACCCTCGC TATTTCGCCATCCCGGGCGGCATGCCGCTCGACGGCAATGCATGCGCCGCCGAGGCCCAGGCCCTGCTGTCCGAC GTGCTCGAGGACTCCAGTGTCACGGCACTGCAGACTCTCCTCATGCTGCTGGTATACGAGACGTTCAGCGGTCGG CTCCAGGCGGCCTCGATGTACCATGCGGCCGCCTGCCGCGCCCTCTTCGCCTTGGACGCGCACATCATCGTGAGC GAGCCGGCCGAGGAGGGCGAGCTCAGCCTGCAGGACCGCGAAGCCCGACTGCTTCGCGTGCTGTTCTGGGTCTGC TTCATCTTCGACAAGGACATCGCCCTCCGCACCGGCCAGCCGCCCATCATCAACGACGAATTCTGCGACCTGACC CTCCCCTGGCGGGCCGACAGCAGCCGATTCACCAACCCGGGGCGTGACGGCGAGGCGTCGTCGTCGTCGTCGTCG GTGTCGTCGTCGTCGGCGTCGGCGTCGGCGTCGGCCGACGTGATGAAGGCGCCCTGGTACCACGGCGACCTGCAG CTGACCCTGCTCAAGTCCAAGGCCTGCCGGCTGCTGTACTCTGCCACGTCGCTGCGGCAGCCCAACGCGGCGCTC CTGCGCACCATCCGCGAGCTGGACGAGGAGCTCGAGGAGTGGCGGCTGACGATCCCGGCCGAATTCTCGCCCTCG CTCTTCGTCTCCAAGCACCCGAGGCTGGCCGCCGACCTGGACACGTCGAGGAGCATGGTGCACATTGAGCTGCAC CTCAACTACCACTACCTCATGAACATCATCCACGCGGCCAGCGGCCGGTGCGTCGTCGACGGGAGCGACCCGGAG AGGGCCGAGACGTTCGGCGTGCAGTCGAGCCTGGAGCTGTCGGTCGAGGCCAGCCGGTCGACGCTCATCTACCTG AGCGCGGCGGCGGGACGGCTCGTCAGCGAGGCATTCTGGGTCTTCAGCTTCTATCCCATGTCGGCGCTCGTCAGT CTCTTCTTCAACATACTGCGGTATCCGTCGCAAGAGCAGGCCACCCAGGACGTGGAGCTGCTGGGCTCGGCCTCG GAAGTCATCCGGAGAATGCCTCACAACCGAAGCCTCACGGCCCGGGAGACGGCGTACCTGAAGAGGATCGACGAC TTCACCGCCGAGCTCTACAGGCTGGGCCTATGCGCCATCGCGCAGGCACGGGACGAAGCGGCAGAACGAGCCAGG GCGGCCCAGCTCGACTCGTCTCGACTTGGCTGA |
Transcript | >Hirsu2|8240 ATGGCCCGGCAAAGGCGAGCCTGCGACACGTGCTACAAGCGAAAGATCCAGTGCGATGCGGCAGACGAGGGTTCG CAATGCAACTGGTGCAGCCACCACAACCTTCGCTGCACCTTTACTCGCCCCAAGGCCCGCCCCAGGAGCCGAACG CTCTCCCGCGCCGGTCCCAGGCAGAGGCTGGCCCTCGCCGACGGCAACGGACCGGCATCGCTGCTCTCCTCCGCC TCTCGTTCCCCGGATCCAGCCCCGGCCCGGCCCCCCAACCCGAGACGGGCCGTCGACCCGCCCCGGCCGTCGCAT CCGCGCGGCAGGCACGTCAATGCCGCCCTCGGCCTGATCTACATCTCCGGCCACAACTTCGGCCGCTTCTACTCC GCCAGCGGCTTCCCGCAGTTCACCGCCGAGGGCGAGGAATGGATCCGCTCCAGGACGGGCCAGTGGCCGAGCCTG CCCGGCCTGTCCGCCGCCGCCGCCGCCGCCGCCGCCCCAGAGTCGGCATCGCCGTCGCTGCTCGCGCACAGGCAC CCGCCCGGCTGCGCGGCCCGGCTTCCCGACAGGCTGCTGGTGGAGACGCTGCTCAAGGCCTTTGTGGCCTCGGAC CTGATCCGCGTCTTCCCCTTGCTGGACGGCGTCCTGTTCCTGCAAATCATCAACCAGGCCTACGGCTCCGAGCAG CAGCCGCCGCGGGCCATTGAGCGCCACAGCGCCAAGGCCTGCGTCTTCGCCCTCCTCTCCCTCATGGACCCTCGC TATTTCGCCATCCCGGGCGGCATGCCGCTCGACGGCAATGCATGCGCCGCCGAGGCCCAGGCCCTGCTGTCCGAC GTGCTCGAGGACTCCAGTGTCACGGCACTGCAGACTCTCCTCATGCTGCTGGTATACGAGACGTTCAGCGGTCGG CTCCAGGCGGCCTCGATGTACCATGCGGCCGCCTGCCGCGCCCTCTTCGCCTTGGACGCGCACATCATCGTGAGC GAGCCGGCCGAGGAGGGCGAGCTCAGCCTGCAGGACCGCGAAGCCCGACTGCTTCGCGTGCTGTTCTGGGTCTGC TTCATCTTCGACAAGGACATCGCCCTCCGCACCGGCCAGCCGCCCATCATCAACGACGAATTCTGCGACCTGACC CTCCCCTGGCGGGCCGACAGCAGCCGATTCACCAACCCGGGGCGTGACGGCGAGGCGTCGTCGTCGTCGTCGTCG GTGTCGTCGTCGTCGGCGTCGGCGTCGGCGTCGGCCGACGTGATGAAGGCGCCCTGGTACCACGGCGACCTGCAG CTGACCCTGCTCAAGTCCAAGGCCTGCCGGCTGCTGTACTCTGCCACGTCGCTGCGGCAGCCCAACGCGGCGCTC CTGCGCACCATCCGCGAGCTGGACGAGGAGCTCGAGGAGTGGCGGCTGACGATCCCGGCCGAATTCTCGCCCTCG CTCTTCGTCTCCAAGCACCCGAGGCTGGCCGCCGACCTGGACACGTCGAGGAGCATGGTGCACATTGAGCTGCAC CTCAACTACCACTACCTCATGAACATCATCCACGCGGCCAGCGGCCGGTGCGTCGTCGACGGGAGCGACCCGGAG AGGGCCGAGACGTTCGGCGTGCAGTCGAGCCTGGAGCTGTCGGTCGAGGCCAGCCGGTCGACGCTCATCTACCTG AGCGCGGCGGCGGGACGGCTCGTCAGCGAGGCATTCTGGGTCTTCAGCTTCTATCCCATGTCGGCGCTCGTCAGT CTCTTCTTCAACATACTGCGGTATCCGTCGCAAGAGCAGGCCACCCAGGACGTGGAGCTGCTGGGCTCGGCCTCG GAAGTCATCCGGAGAATGCCTCACAACCGAAGCCTCACGGCCCGGGAGACGGCGTACCTGAAGAGGATCGACGAC TTCACCGCCGAGCTCTACAGGCTGGGCCTATGCGCCATCGCGCAGGCACGGGACGAAGCGGCAGAACGAGCCAGG GCGGCCCAGCTCGACTCGTCTCGACTTGGCTGA |
Gene | >Hirsu2|8240 ATGGCCCGGCAAAGGCGAGCCTGCGACACGTGCTACAAGCGAAAGGCACGTCCGAGTCCAGCGTCCCCTTGTCGC TCGCATTCGCTGACTGGCTGCCGGCGCCACAGATCCAGTGCGATGCGGCAGACGAGGGTTCGCAATGCAACTGGT GCAGCCACCACAACCTTCGCTGCACCTTTACTCGCCCCAAGGCCCGCCCCAGGAGCCGAACGCTGTCAGTGGTCC CCCGGCCTTGCCCTGCCCCCCGGCCGGGCCTGATTGGCTGACCGTCGCTCGCCGCAGCAGCTCCCGCGCCGGTCC CAGGCAGAGGCTGGCCCTCGCCGACGGCAACGGACCGGCATCGCTGCTCTCCTCCGCCTCTCGTTCCCCGGATCC AGCCCCGGCCCGGCCCCCCAACCCGAGACGGGCCGTCGACCCGCCCCGGCCGTCGCATCCGCGCGGCAGGCACGT CAATGCCGCCCTCGGCCTGATCTACATCTCCGGCCACAACTTCGGCCGCTTCTACTCCGCCAGCGGCTTCCCGCA GTTCACCGCCGAGGGCGAGGAATGGATCCGCTCCAGGACGGGCCAGTGGCCGAGCCTGCCCGGCCTGTCCGCCGC CGCCGCCGCCGCCGCCGCCCCAGAGTCGGCATCGCCGTCGCTGCTCGCGCACAGGCACCCGCCCGGCTGCGCGGC CCGGCTTCCCGACAGGCTGCTGGTGGAGACGCTGCTCAAGGCCTTTGTGGCCTCGGACCTGATCCGCGTCTTCCC CTTGCTGGACGGCGTCCTGTTCCTGCAAATCATCAACCAGGCCTACGGCTCCGAGCAGCAGCCGCCGCGGGCCAT TGAGCGCCACAGCGCCAAGGCCTGCGTCTTCGCCCTCCTCTCCCTCATGGACCCTCGCTATTTCGCCATCCCGGG CGGCATGCCGCTCGACGGCAATGCATGCGCCGCCGAGGCCCAGGCCCTGCTGTCCGACGTGCTCGAGGACTCCAG TGTCACGGCACTGCAGACTCTCCTCATGCTGGTATGCTGCCCGACTTTGCCCGCCCGAATCCTTTGAGGAGTGAG AAGGGGGAGAGCCAAGGCTCGTCGAGGATCCGAGACGACGATGGCAGACCTTGACTGACGGCGCCTGGACAGCTG GTATACGAGACGTTCAGCGGTCGGCTCCAGGCGGCCTCGATGTACCATGCGGCCGCCTGCCGCGCCCTCTTCGCC TTGGACGCGCACATCATCGTGAGCGAGCCGGCCGAGGAGGGCGAGCTCAGCCTGCAGGACCGCGAAGCCCGACTG CTTCGCGTGCTGTTCTGGGTCTGCTTCATCTTCGACAAGGACATCGCCCTCCGCACCGGCCAGCCGCCCATCATC AACGACGAATTCTGCGACCTGACCCTCCCCTGGCGGGCCGACAGCAGCCGATTCACCAACCCGGGGCGTGACGGC GAGGCGTCGTCGTCGTCGTCGTCGGTGTCGTCGTCGTCGGCGTCGGCGTCGGCGTCGGCCGACGTGATGAAGGCG CCCTGGTACCACGGCGACCTGCAGCTGACCCTGCTCAAGTCCAAGGCCTGCCGGCTGCTGTACTCTGCCACGTCG CTGCGGCAGCCCAACGCGGCGCTCCTGCGCACCATCCGCGAGCTGGACGAGGAGCTCGAGGAGTGGCGGCTGACG ATCCCGGCCGAATTCTCGCCCTCGCTCTTCGTCTCCAAGCACCCGAGGCTGGCCGCCGACCTGGACACGTCGAGG AGCATGGTGCACATTGAGCTGCACCTCAACTACCACTACCTCATGAACATCATCCACGCGGCCAGCGGCCGGTGC GTCGTCGACGGGAGCGACCCGGAGAGGGCCGAGACGTTCGGCGTGCAGTCGAGCCTGGAGCTGTCGGTCGAGGCC AGCCGGTCGACGCTCATCTACCTGAGCGCGGCGGCGGGACGGCTCGTCAGCGAGGCATTCTGGTACGTTGCGGCC CGGTGACGTGTGGCTGGACGCAATGGACTGACGCGCGCCACAGGGTCTTCAGCTTCTATCCCATGTCGGCGCTCG TCAGTCTCTTCTTCAACATACTGCGGTATCCGTCGCAAGAGCAGGCCACCCAGGACGTGGAGCTGCTGGGCTCGG CCTCGGAAGTCATCCGGAGAATGCCTCACAACCGAAGCCTCACGGCCCGGGAGACGGCGTACCTGAAGAGGATCG ACGACTTCACCGCCGAGCTCTACAGGCTGGGCCTATGCGCCATCGCGCAGGCACGGGACGAAGCGGCAGAACGAG CCAGGGCGGCCCAGCTCGACTCGTCTCGACTTGGCTGA |